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MacroAPE 1083:CNhs11750 bl f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;13.839186602389274;49.83078755759624;25.963750635546475;71.88345003545881!2;5.551615678261083;3.1212841211975606;44.397169637513066;108.4471...")
 
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0464-106H5;0.832508!10827-111C8;0.433752!10789-110H6;0.557839!10828-111C9;0.685381!10788-110H5;0.723867!10792-110H9;0.697518!10765-110E9;0.970458!10829-111D1;0.89599!10830-111D2;0.213027!10831-111D3;0.652125!10832-111D4;0.68829!10833-111D5;0.282124!10764-110E8;0.84423!10770-110F5;0.852578!10399-106A3;0.402126!10400-106A4;0.785726!10405-106A9;0.893185!10834-111D6;0.945135!10835-111D7;0.836534!10836-111D8;0.504491!10837-111D9;0.988403!10699-109G6;0.0956884!10802-111A1;0.0644222!10796-110I4;0.7791!10010-101C1;0.0742677!10810-111A9;0.409883!10421-106C7;0.324078!10708-109H6;0.481452!12235-129G3;0.722507!12236-129G4;0.185262!12237-129G5;0.443088!10167-103B5;0.324939!10151-102I7;0.311204!10428-106D5;0.232582!10795-110I3;0.27973!10805-111A4;0.540046!10052-101G7;0.559898!10189-103D9;0.0673035!10589-108D4;0.133467!10425-106D2;0.596684!10427-106D4;0.110785!10702-109G9;0.681777!10432-106D9;0.769199!10496-107C1;0.0889515!10718-109I7;0.336778!10011-101C2;0.744497!10053-101G8;0.0105977!10686-109F2;0.451083!10084-102B3;0.526016!10012-101C3;0.223098!10085-102B4;0.248155!10482-107A5;0.0383323!10419-106C5;0.731903!10080-102A8;0.308044!10760-110E4;0.11257!10709-109H7;0.000172794!10710-109H8;0.175875!10703-109H1;0.0337109!10719-109I8;0.932508!10642-109A3;0.687403!10177-103C6;0.369659!10164-103B2;0.37538!10173-103C2;0.508953!10166-103B4;0.311639!10083-102B2;0.199482!10188-103D8;0.534844!10552-107I3;0.159817!10553-107I4;0.0836996!10013-101C4;0.111185!10536-107G5;0.00869337!10618-108G6;0.75244!10423-106C9;0.790915!10785-110H2;0.917836!12238-129G6;0.366517!12239-129G7;0.802841!12240-129G8;0.313781!10416-106C2;0.879099!10801-110I9;0.0949089!10766-110F1;0.952889!10824-111C5;0.578687!10825-111C6;0.104019!10826-111C7;0.163522!10454-106G4;0.176587!10409-106B4;0.638374!10638-108I8;0.642622!10636-108I6;0.00904119!10513-107D9;0.325441!10420-106C6;0.812808!10082-102B1;0.727639!10014-101C5;0.141813!10070-101I7;0.0106201!10452-106G2;0.009155!10453-106G3;0.625939!10449-106F8;0.822177!10042-101F6;0.806511!10069-101I6;0.53974!10193-103E4;0.408047!10631-108I1;0.471998!10438-106E6;0.234055!10488-107B2;0.141838!10196-103E7;0.146915!10071-101I8;0.118149!10071-101I8;0.00443234!10041-101F5;0.0254959!10451-106G1;0.0673876!10450-106F9;0.190696!10604-108F1;0.995506!10605-108F2;0.211104!10606-108F3;0.150798!10603-108E9;0.244108!10497-107C2;0.0567119!10448-106F7;0.272376!10643-109A4;0.477479!10426-106D3;0.126014!10431-106D8;0.00456395!10197-103E8;0.0662492!10443-106F2;0.256737!10815-111B5;0.383984!10816-111B6;0.00675688!10817-111B7;0.0188947!10015-101C6;0.00532856!10410-106B5;0.783295!10054-101G9;0.054979!10758-110E2;0.0505053!10711-109H9;0.087761!10040-101F4;0.0785591!10470-106I2;0.180413!10415-106C1;0.146983!10198-103E9;0.0508433!10614-108G2;0.0438992!10612-108F9;0.101706!10549-107H9;0.104322!10615-108G3;0.782313!10487-107B1;0.487354!10433-106E1;0.0118184!10688-109F4;0.86582!10444-106F3;0.0166756!10444-106F3;0.295544!10485-107A8;0.465423!10413-106B8;0.918617!10175-103C4;0.903233!10161-103A8;0.482465!12131-128D7;0.709387!10624-108H3;0.385683!10712-109I1;0.970684!10205-103F7;0.740888!10206-103F8;0.040027!10207-103F9;0.0525721!10050-101G5;0.104505!10051-101G6;0.370232!10016-101C7;0.241954!10046-101G1;0.059399!10778-110G4;0.0161932!10633-108I3;0.470543!10818-111B8;0.3765!10819-111B9;0.742055!10820-111C1;0.688144!10484-107A7;0.70973!10808-111A7;0.552814!10169-103B7;0.962361!10153-102I9;0.455302!13425-144D5;0.270804!13433-144E4;0.716543!13437-144E8;0.419979!11904-125F5;0.507703!11905-125F6;0.723909!10039-101F3;0.491704!10791-110H8;0.155205!10017-101C8;0.00262248!10045-101F9;0.250695!10509-107D5;0.0242736!10839-111E2;0.370679!10692-109F8;0.202317!10079-102A7;0.714766!10078-102A6;0.0238767!10721-110A1;0.160278!10569-108B2;0.594521!10570-108B3;0.333302!10571-108B4;0.747408!10647-109A8;0.337819!10752-110D5;0.937924!10782-110G8;0.626421!10726-110A6;0.784962!10018-101C9;0.0695138!10086-102B5;0.681418!10182-103D2;0.377641!10165-103B3;0.458153!10499-107C4;0.647321!10408-106B3;0.127163!10019-101D1;0.0478772!10068-101I5;0.478822!10075-102A3;0.124373!10077-102A5;0.531558!10727-110A7;0.322531!10775-110G1;0.062705!10412-106B7;0.196496!12231-129F8;0.247853!12232-129F9;0.865453!12233-129G1;0.859983!12234-129G2;0.865476!10414-106B9;0.596193!10170-103B8;0.413403!10183-103D3;0.276945!10150-102I6;0.271985!10174-103C3;0.221631!10155-103A2;0.288014!10038-101F2;0.485725!10838-111E1;0.314151!10759-110E3;0.0871571!10514-107E1;0.0370003!10465-106H6;0.12271!10691-109F7;0.00244614!10843-111E6;0.0164346!10844-111E7;0.636968!11747-123G1;0.648072!11748-123G2;0.649696!11749-123G3;0.932573!11750-123G4;0.522079!11751-123G5;0.780293!11840-124H4;0.118166!11752-123G6;0.44027!11753-123G7;0.856353!11754-123G8;0.92131!11755-123G9;0.371673!11756-123H1;0.352319!11833-124G6;0.53164!11760-123H5;0.662571!11836-124G9;0.455401!11758-123H3;0.966297!11835-124G8;0.982518!11762-123H7;0.75141!11838-124H2;0.410413!11757-123H2;0.9198!11759-123H4;0.656121!11761-123H6;0.926048!11842-124H6;0.189757!11837-124H1;0.283569!10568-108B1;0.944409!13230-141I8;0.204168!13231-141I9;0.608902!10696-109G3;0.492743!10493-107B7;0.025313!10494-107B8;0.0295935!10850-111F4;0.176682!10851-111F5;0.216736!10852-111F6;0.23576!10853-111F7;0.39064!10854-111F8;0.0424802!10855-111F9;0.261976!10856-111G1;0.16854!10847-111F1;0.563161!10846-111E9;0.25656!10848-111F2;0.278835!10845-111E8;0.0305193!10857-111G2;0.785631!10858-111G3;0.0111053!10156-103A3;0.00306103!11901-125F2;0.278753!11902-125F3;0.822125!11903-125F4;0.908235!10689-109F5;0.51585!10648-109A9;0.127885!10784-110H1;0.0997994!10744-110C6;0.0292208!10772-110F7;0.990707!10474-106I6;0.280812!10600-108E6;0.7278!10684-109E9;0.534995!12226-129F3;0.30864!12227-129F4;0.00204949!10508-107D4;0.0702526!10539-107G8;0.160803!10607-108F4;0.0897149!10555-107I6;0.551215!10774-110F9;0.181875!10637-108I7;0.214028!10663-109C6;0.741774!10728-110A8;0.300982!10729-110A9;0.477364!10430-106D7;0.583221!10730-110B1;0.857669!10813-111B3;0.401279!10812-111B2;0.243872!10037-101F1;0.764173!10172-103C1;0.265153!10163-103B1;0.229399!10076-102A4;0.233052!10073-102A1;0.176117!10036-101E9;0.0199108!10195-103E6;0.216757!10277-104E7;0.246419!10434-106E2;0.820137!10550-107I1;0.0561206!10545-107H5;0.103441!10544-107H4;0.0563683!10704-109H2;0.0174762!10510-107D6;0.240909!10558-107I9;0.182975!10020-101D2;0.434926!10732-110B3;0.0291073!10049-101G4;0.0750782!10698-109G5;0.819311!10437-106E5;0.800117!10417-106C3;0.0337085!10035-101E8;0.0710544!10171-103B9;0.202279!10157-103A4;0.375457!10034-101E7;0.226216!10072-101I9;0.236494!10199-103F1;0.016127!10200-103F2;0.950824!10697-109G4;0.244048!10723-110A3;0.328584!10179-103C8;0.116147!10160-103A7;0.116167!10180-103C9;0.102109!10162-103A9;0.308971!10021-101D3;0.145373!10840-111E3;0.217368!10706-109H4;0.630258!10033-101E6;0.0615029!10032-101E5;0.467294!10490-107B4;0.200266!10439-106E7;0.000801816!10022-101D4;0.0685939!10176-103C5;0.0191126!10469-106I1;0.562873!10067-101I4;0.850064!10411-106B6;0.00125698!10471-106I3;0.748111!10030-101E3;0.824706!10475-106I7;0.0399034!10787-110H4;0.449678!10477-106I9;0.768801!10695-109G2;0.411423!11771-123I7;0.112282!11772-123I8;0.627757!11773-123I9;0.836725!10093-102C3;0.38078!10442-106F1;0.661869!10442-106F1;0.143671!10201-103F3;0.331599!10639-108I9;0.0416147!11843-124H7;0.0958115!11841-124H5;0.0612118!10693-109F9;0.0661549!10436-106E4;0.0718976!10483-107A6;0.063124!10282-104F3;0.482621!10023-101D5;0.748374!10066-101I3;0.623553!10065-101I2;0.162543!10800-110I8;0.0149233!10610-108F7;0.745983!10841-111E4;0.632319!10541-107H1;0.906619!10842-111E5;0.717669!10562-108A4;0.690198!10024-101D6;0.64058!10064-101I1;0.024105!10609-108F6;0.00215138!10048-101G3;0.368152!10781-110G7;0.0731525!10181-103D1;0.725144!10159-103A6;0.261669!10056-101H2;0.622431!10737-110B8;0.400654!10025-101D7;0.93126!10044-101F8;0.462989!10424-106D1;0.179749!10463-106H4;0.798111!10616-108G4;0.00676951!10486-107A9;0.237284!10062-101H8;0.00206222!10202-103F4;0.442151!10158-103A5;0.789084!10441-106E9;0.820452!10031-101E4;0.0899392!10063-101H9;0.219949!10063-101H9;0.0205385!11763-123H8;0.00668813!11765-123I1;0.538032!11768-123I4;0.950497!10807-111A6;0.57856!10790-110H7;0.212723!10798-110I6;0.197617!10786-110H3;0.652633!10591-108D6;0.580149!10593-108D8;0.949148!10590-108D5;0.653207!10026-101D8;0.800158!10096-102C6;0.0612164!10168-103B6;0.171814!10154-103A1;0.332432!10209-103G2;0.521393!10061-101H7;0.893973!10027-101D9;0.629714!10043-101F7;0.428602!10783-110G9;0.185695!10028-101E1;0.125812!10060-101H6;0.535244!10203-103F5;0.561335!10059-101H5;0.653647!10047-101G2;0.724266!10029-101E2;0.937159!10058-101H4;0.815699!10418-106C4;0.376756!10492-107B6;0.202712!10694-109G1;0.0276813!10797-110I5;0.153116!10057-101H3;0.712287!10100-102D1;0.00218411!10055-101H1;0.00289777!10204-103F6;0.0151726!10191-103E2;0.0400271!10563-108A5;0.333169
|name=CNhs11750_bl_f0
|name=CNhs11750_bl_f0
|tomtom_result=Gata1#MA0035.2;-1;2.1366e-05;0.0101702;0.0203405;11;TTCCTTCTCTTT;TTCTTATCTGT;-!Klf4#MA0039.1;-2;0.000396713;0.188835;0.188835;10;TTCCTTCTCTTT;CCTTCCTTTA;-!SFL1#MA0377.1;5;0.00266511;1.26859;0.785496;12;TTCCTTCTCTTT;TTTTATTTCTTCTATTCTCTA;-!id1#MA0120.1;2;0.0033004;1.57099;0.785496;10;TTCCTTCTCTTT;TTTTCCTTTTCG;+!HMG-I/Y#MA0045.1;4;0.00512814;2.44099;0.9177;12;TTCCTTCTCTTT;GTTTTTCCATTTGTTG;-!Trl#MA0205.1;-1;0.00641855;3.05523;0.9177;10;TTCCTTCTCTTT;TTGCTCTCTC;+!Hltf#MA0109.1;0;0.00904724;4.30649;0.9177;10;TTCCTTCTCTTT;AACCTTATAT;+!Tal1::Gata1#MA0140.1;-3;0.00962948;4.58363;0.9177;9;TTCCTTCTCTTT;CTTATCTGTCCCCACCAG;-!GLN3#MA0307.1;-4;0.00997389;4.74757;0.9177;5;TTCCTTCTCTTT;TTATC;-!AZF1#MA0277.1;-3;0.0100947;4.80508;0.9177;9;TTCCTTCTCTTT;TTTCTTTTT;-!IRF2#MA0051.1;4;0.0106037;5.04735;0.9177;12;TTCCTTCTCTTT;GTTTTGCTTTCACTTTCC;-!GZF3#MA0309.1;-2;0.0139356;6.63334;1;8;TTCCTTCTCTTT;TCTTATCA;-!MGA1#MA0336.1;9;0.0159647;7.59921;1;12;TTCCTTCTCTTT;TTTAGAGTGTTCTATAGTCCT;-!GAT1#MA0300.1;-3;0.0197004;9.37738;1;8;TTCCTTCTCTTT;CTTATCGG;-!squamosa#MA0082.1;2;0.0208735;9.9358;1;12;TTCCTTCTCTTT;ATTTCCATTTTTGG;-
}}
}}

Latest revision as of 13:46, 7 September 2012

Full Name: CNhs11750_bl_f0

Motif matrix
POACGT
113.83918660238927449.8307875575962425.96375063554647571.88345003545881
25.5516156782610833.121284121197560644.397169637513066108.44710539401906
31.4596339424821902127.0467584421899523.835734411823329.175048034495285
40.756177936814667489.73540796712910.071.02558892704704
50.00.00.0161.51717483099088
60.013.3889197629357890.0148.12825506805504
756.3852937659401891.748307358527230.013.383573706523327
80.336332731929121052.4330763789452410.0158.74776572011646
90.4862604934271871126.647018740421320.034.38389559714227
106.18969722828990812.9616859481844350.0142.3657916545165
111.944235347209737146.13668017422908549.95722896527184563.479030344280076
1263.6649258017779766.3484752557458120.091.503773773467

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Gata1#MA0035.2-12.1366e-050.01017020.020340511TTCCTTCTCTTTTTCTTATCTGT-
Klf4#MA0039.1-20.0003967130.1888350.18883510TTCCTTCTCTTTCCTTCCTTTA-
SFL1#MA0377.150.002665111.268590.78549612TTCCTTCTCTTTTTTTATTTCTTCTATTCTCTA-
id1#MA0120.120.00330041.570990.78549610TTCCTTCTCTTTTTTTCCTTTTCG+
HMG-I/Y#MA0045.140.005128142.440990.917712TTCCTTCTCTTTGTTTTTCCATTTGTTG-
Trl#MA0205.1-10.006418553.055230.917710TTCCTTCTCTTTTTGCTCTCTC+
Hltf#MA0109.100.009047244.306490.917710TTCCTTCTCTTTAACCTTATAT+
Tal1::Gata1#MA0140.1-30.009629484.583630.91779TTCCTTCTCTTTCTTATCTGTCCCCACCAG-
GLN3#MA0307.1-40.009973894.747570.91775TTCCTTCTCTTTTTATC-
AZF1#MA0277.1-30.01009474.805080.91779TTCCTTCTCTTTTTTCTTTTT-
IRF2#MA0051.140.01060375.047350.917712TTCCTTCTCTTTGTTTTGCTTTCACTTTCC-
GZF3#MA0309.1-20.01393566.6333418TTCCTTCTCTTTTCTTATCA-
MGA1#MA0336.190.01596477.59921112TTCCTTCTCTTTTTTAGAGTGTTCTATAGTCCT-
GAT1#MA0300.1-30.01970049.3773818TTCCTTCTCTTTCTTATCGG-
squamosa#MA0082.120.02087359.9358112TTCCTTCTCTTTATTTCCATTTTTGG-
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