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MacroAPE 1083:NKX3-2: Difference between revisions

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;0.571536!10007-101B4;0.905856!11520-119H8;0.0370102!11600-120H7;0.360007!11681-122H7;0.41527!11216-116B1;0.277009!12179-129A1;0.719404!12180-129A2;1.96517e-07!12181-129A3;6.38571e-09!12176-128I7;6.68745e-07!12177-128I8;2.17361e-07!12182-129A4;8.54679e-07!12183-129A5;2.7834e-08!12184-129A6;2.14506e-08!10809-111A8;5.32602e-06!10597-108E3;0.0012185!10717-109I6;0.00763619!10455-106G5;0.458064!10534-107G3;0.0126748!10429-106D6;0.223596!10464-106H5;0.0654968!10827-111C8;0.0518385!10789-110H6;0.00536664!10828-111C9;0.0303064!10788-110H5;0.00361221!10792-110H9;0.0417003!10765-110E9;0.0146123!10829-111D1;0.00415531!10830-111D2;0.0108396!10831-111D3;0.0565503!10832-111D4;0.00384927!10833-111D5;0.0105253!10764-110E8;0.00818772!10770-110F5;0.00369689!10399-106A3;0.0649231!10400-106A4;0.00552321!10405-106A9;0.00479401!10834-111D6;0.00450785!10835-111D7;0.00746914!10836-111D8;0.0768867!10837-111D9;0.168411!10699-109G6;0.105491!10802-111A1;0.0048472!10796-110I4;0.0112334!10010-101C1;0.651075!10810-111A9;0.167289!10421-106C7;0.572123!10708-109H6;0.0094155!12235-129G3;0.0304894!12236-129G4;0.847235!12237-129G5;0.590338!10167-103B5;0.690142!10151-102I7;0.134617!10428-106D5;0.0915594!10795-110I3;0.336576!10805-111A4;0.0164057!10052-101G7;0.0050762!10189-103D9;0.0312165!10589-108D4;0.627798!10425-106D2;0.0780162!10427-106D4;0.0359871!10702-109G9;0.00288235!10432-106D9;0.962245!10496-107C1;0.347507!10718-109I7;0.396417!10011-101C2;0.00920456!10053-101G8;0.0826752!10686-109F2;8.82216e-05!10084-102B3;0.892878!10012-101C3;0.00694679!10085-102B4;0.0645093!10482-107A5;0.0075526!10419-106C5;0.271163!10080-102A8;0.90054!10760-110E4;0.0354561!10709-109H7;0.887347!10710-109H8;0.536816!10703-109H1;0.404781!10719-109I8;0.052352!10642-109A3;0.00130482!10177-103C6;0.0111215!10164-103B2;0.113657!10173-103C2;0.0594071!10166-103B4;0.0412042!10083-102B2;0.00739163!10188-103D8;0.00191434!10552-107I3;0.0195234!10553-107I4;0.762692!10013-101C4;0.337289!10536-107G5;0.0274553!10618-108G6;0.0450601!10423-106C9;0.759721!10785-110H2;0.94386!12238-129G6;0.481189!12239-129G7;0.725223!12240-129G8;0.354708!10416-106C2;0.074109!10801-110I9;0.0269831!10766-110F1;0.0109159!10824-111C5;0.0150994!10825-111C6;0.32872!10826-111C7;0.296155!10454-106G4;0.176808!10409-106B4;0.464016!10638-108I8;0.0354415!10636-108I6;0.571263!10513-107D9;0.504446!10420-106C6;0.388097!10082-102B1;0.108158!10014-101C5;0.0076466!10070-101I7;0.0216374!10452-106G2;0.0159964!10453-106G3;0.354507!10449-106F8;0.293567!10042-101F6;0.255603!10069-101I6;0.108996!10193-103E4;0.0227135!10631-108I1;0.0747148!10438-106E6;0.24134!10488-107B2;0.556911!10196-103E7;0.77931!10071-101I8;0.0129484!10071-101I8;0.0500926!10041-101F5;0.0126311!10451-106G1;0.730222!10450-106F9;0.192031!10604-108F1;0.216694!10605-108F2;0.935651!10606-108F3;0.997692!10603-108E9;0.920851!10497-107C2;0.566122!10448-106F7;0.454957!10643-109A4;0.564412!10426-106D3;0.829515!10431-106D8;0.7238!10197-103E8;0.695963!10443-106F2;0.00145441!10815-111B5;0.154418!10816-111B6;0.984576!10817-111B7;0.973935!10015-101C6;0.921513!10410-106B5;0.0476401!10054-101G9;0.0201332!10758-110E2;0.00111612!10711-109H9;0.0259705!10040-101F4;0.104495!10470-106I2;0.088712!10415-106C1;0.311329!10198-103E9;0.23283!10614-108G2;0.0389885!10612-108F9;0.751865!10549-107H9;0.557584!10615-108G3;0.127086!10487-107B1;0.294828!10433-106E1;0.167598!10688-109F4;0.622367!10444-106F3;0.309736!10444-106F3;0.382237!10485-107A8;0.324346!10413-106B8;0.754413!10175-103C4;0.923202!10161-103A8;0.104449!12131-128D7;0.193203!10624-108H3;0.0023362!10712-109I1;0.411!10205-103F7;0.00310202!10206-103F8;0.037058!10207-103F9;0.00598814!10050-101G5;0.254668!10051-101G6;0.00107567!10016-101C7;0.00715256!10046-101G1;0.00710252!10778-110G4;0.00985956!10633-108I3;0.997237!10818-111B8;0.0749261!10819-111B9;0.276877!10820-111C1;0.285258!10484-107A7;0.289465!10808-111A7;0.642136!10169-103B7;0.0129203!10153-102I9;0.109124!13425-144D5;0.0616902!13433-144E4;8.32973e-06!13437-144E8;5.05597e-07!11904-125F5;2.7368e-06!11905-125F6;1.51402e-06!10039-101F3;1.1512e-06!10791-110H8;0.0744765!10017-101C8;0.821578!10045-101F9;0.199136!10509-107D5;0.0223004!10839-111E2;0.215548!10692-109F8;0.159308!10079-102A7;0.32716!10078-102A6;0.00299501!10721-110A1;0.00956682!10569-108B2;0.0210976!10570-108B3;0.946426!10571-108B4;0.827166!10647-109A8;0.686551!10752-110D5;0.319448!10782-110G8;0.118558!10726-110A6;0.840349!10018-101C9;0.375543!10086-102B5;0.31123!10182-103D2;0.00571432!10165-103B3;0.0446028!10499-107C4;0.0968521!10408-106B3;0.911824!10019-101D1;0.588046!10068-101I5;0.680206!10075-102A3;0.787082!10077-102A5;0.974276!10727-110A7;0.0696141!10775-110G1;0.00427891!10412-106B7;0.0209521!12231-129F8;0.928366!12232-129F9;0.0210399!12233-129G1;0.050731!12234-129G2;0.033675!10414-106B9;0.0387798!10170-103B8;0.244696!10183-103D3;0.119515!10150-102I6;0.0638603!10174-103C3;0.0861695!10155-103A2;0.0825725!10038-101F2;0.0370087!10838-111E1;0.0378474!10759-110E3;0.00101927!10514-107E1;0.346286!10465-106H6;0.454806!10691-109F7;0.325705!10843-111E6;0.603325!10844-111E7;0.0576228!11747-123G1;0.0358772!11748-123G2;0.784313!11749-123G3;0.549764!11750-123G4;0.89064!11751-123G5;0.83942!11840-124H4;0.673618!11752-123G6;0.29791!11753-123G7;0.692498!11754-123G8;0.874359!11755-123G9;0.820802!11756-123H1;0.635774!11833-124G6;0.37735!11760-123H5;0.695344!11836-124G9;0.753616!11758-123H3;0.696815!11835-124G8;0.895685!11762-123H7;0.488264!11838-124H2;0.646431!11757-123H2;0.630434!11759-123H4;0.394483!11761-123H6;0.701492!11842-124H6;0.983167!11837-124H1;0.745876!10568-108B1;0.33671!13230-141I8;0.024325!13231-141I9;0.239844!10696-109G3;0.241609!10493-107B7;0.741296!10494-107B8;0.91094!10850-111F4;0.825299!10851-111F5;0.540271!10852-111F6;0.852305!10853-111F7;0.921906!10854-111F8;0.655283!10855-111F9;0.226836!10856-111G1;0.719388!10847-111F1;0.913739!10846-111E9;0.529021!10848-111F2;0.649001!10845-111E8;0.644651!10857-111G2;0.615212!10858-111G3;0.551716!10156-103A3;0.527526!11901-125F2;0.0796673!11902-125F3;9.26633e-06!11903-125F4;2.86945e-05!10689-109F5;0.000655635!10648-109A9;0.874007!10784-110H1;0.876005!10744-110C6;0.357323!10772-110F7;0.00471982!10474-106I6;0.00713023!10600-108E6;0.0024016!10684-109E9;0.805218!12226-129F3;0.739453!12227-129F4;0.872964!10508-107D4;0.978049!10539-107G8;0.0122823!10607-108F4;0.0497063!10555-107I6;0.00318932!10774-110F9;0.00239702!10637-108I7;0.0896572!10663-109C6;7.68494e-05!10728-110A8;0.000343424!10729-110A9;0.120765!10430-106D7;0.332876!10730-110B1;0.320894!10813-111B3;0.0552475!10812-111B2;0.0865787!10037-101F1;0.491099!10172-103C1;0.0639191!10163-103B1;0.123749!10076-102A4;0.103764!10073-102A1;0.0475984!10036-101E9;0.025157!10195-103E6;0.0273392!10277-104E7;0.0272053!10434-106E2;0.107908!10550-107I1;0.733066!10545-107H5;0.68527!10544-107H4;0.758394!10704-109H2;0.567641!10510-107D6;0.507417!10558-107I9;0.350165!10020-101D2;0.0882029!10732-110B3;0.0411914!10049-101G4;0.050729!10698-109G5;0.120278!10437-106E5;0.987315!10417-106C3;0.152394!10035-101E8;0.836076!10171-103B9;0.0530779!10157-103A4;0.122412!10034-101E7;0.0753031!10072-101I9;0.0568581!10199-103F1;0.028065!10200-103F2;0.0923723!10697-109G4;0.0217169!10723-110A3;0.0259684!10179-103C8;0.676127!10160-103A7;0.0260389!10180-103C9;0.0493535!10162-103A9;0.326516!10021-101D3;0.412099!10840-111E3;0.220546!10706-109H4;0.118771!10033-101E6;0.847623!10032-101E5;0.0585842!10490-107B4;0.030517!10439-106E7;0.686877!10022-101D4;0.631126!10176-103C5;0.0332806!10469-106I1;0.0652506!10067-101I4;0.491608!10411-106B6;0.000534437!10471-106I3;0.227077!10030-101E3;0.601115!10475-106I7;0.013243!10787-110H4;0.00961004!10477-106I9;0.074531!10695-109G2;0.247307!11771-123I7;0.0938555!11772-123I8;0.0254779!11773-123I9;0.00249268!10093-102C3;0.00595936!10442-106F1;0.337173!10442-106F1;0.187496!10201-103F3;0.207617!10639-108I9;0.0160565!11843-124H7;0.801694!11841-124H5;0.641731!10693-109F9;0.661852!10436-106E4;0.651744!10483-107A6;0.934793!10282-104F3;0.73383!10023-101D5;0.0209863!10066-101I3;0.0117406!10065-101I2;0.00123077!10800-110I8;0.00905025!10610-108F7;0.0864951!10841-111E4;0.0649844!10541-107H1;0.0873976!10842-111E5;0.262348!10562-108A4;0.0272334!10024-101D6;0.527338!10064-101I1;0.299788!10609-108F6;0.017889!10048-101G3;0.624255!10781-110G7;0.0256595!10181-103D1;0.294461!10159-103A6;0.0782664!10056-101H2;0.359992!10737-110B8;0.00166336!10025-101D7;0.450487!10044-101F8;0.0390561!10424-106D1;0.508346!10463-106H4;0.0133042!10616-108G4;0.863392!10486-107A9;0.0636282!10062-101H8;0.172019!10202-103F4;0.024859!10158-103A5;0.062075!10441-106E9;0.323148!10031-101E4;0.197632!10063-101H9;0.0211674!10063-101H9;0.0172895!11763-123H8;0.0120118!11765-123I1;0.110411!11768-123I4;0.0912882!10807-111A6;0.23912!10790-110H7;0.00637334!10798-110I6;0.0352499!10786-110H3;0.00951129!10591-108D6;6.39619e-05!10593-108D8;8.64795e-06!10590-108D5;0.00163981!10026-101D8;0.014167!10096-102C6;3.71882e-05!10168-103B6;7.92147e-05!10154-103A1;0.0901716!10209-103G2;0.185372!10061-101H7;0.0268775!10027-101D9;0.0269702!10043-101F7;0.0010063!10783-110G9;0.0358008!10028-101E1;0.59045!10060-101H6;0.365625!10203-103F5;0.0437296!10059-101H5;0.0135422!10047-101G2;0.0032376!10029-101E2;0.591833!10058-101H4;0.0786671!10418-106C4;0.0140361!10492-107B6;0.982883!10694-109G1;0.522183!10797-110I5;0.141549!10057-101H3;0.856153!10100-102D1;0.006074!10055-101H1;0.219722!10204-103F6;0.0146773!10191-103E2;0.16631!10563-108A5;0.543207
|name=NKX3-2
|name=NKX3-2
|tomtom_result=Nkx3-2#MA0122.1;0;5.29788e-10;2.52179e-07;5.03698e-07;9;TTAAGTGGA;TTAAGTGGA;+!ceh-22#MA0264.1;2;0.000547205;0.260469;0.257864;9;TTAAGTGGA;TTTCAAGTGGT;-!bap#MA0211.1;0;0.000813663;0.387303;0.257864;7;TTAAGTGGA;TTAAGTG;+!GABPA#MA0062.2;2;0.00118533;0.564219;0.28174;9;TTAAGTGGA;CCGGAAGTGGC;+!z#MA0255.1;0;0.00216697;1.03148;0.41205;9;TTAAGTGGA;TTGAGTGATT;+!Dr#MA0188.1;-1;0.00400148;1.90471;0.634071;7;TTAAGTGGA;TAATTGG;-!Nkx2-5#MA0063.1;0;0.00649904;3.09354;0.882713;7;TTAAGTGGA;TTAATTG;+!tin#MA0247.1;1;0.00836278;3.98068;0.993868;7;TTAAGTGGA;CTCAAGTG;+!Nobox#MA0125.1;-1;0.0101737;4.84269;0.998691;8;TTAAGTGGA;TAATTGGT;+!STB3#MA0390.1;1;0.0114403;5.44557;0.998691;9;TTAAGTGGA;CCAGAGTGAAAAATTTTGGAC;-!GIS1#MA0306.1;0;0.0122755;5.84315;0.998691;9;TTAAGTGGA;TTTAGGGGT;-!ZNF354C#MA0130.1;-4;0.0134282;6.39183;0.998691;5;TTAAGTGGA;GTGGAT;-
}}
}}

Latest revision as of 13:52, 7 September 2012

Full Name: NKX3-2

Motif matrix
null

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Nkx3-2#MA0122.105.29788e-102.52179e-075.03698e-079TTAAGTGGATTAAGTGGA+
ceh-22#MA0264.120.0005472050.2604690.2578649TTAAGTGGATTTCAAGTGGT-
bap#MA0211.100.0008136630.3873030.2578647TTAAGTGGATTAAGTG+
GABPA#MA0062.220.001185330.5642190.281749TTAAGTGGACCGGAAGTGGC+
z#MA0255.100.002166971.031480.412059TTAAGTGGATTGAGTGATT+
Dr#MA0188.1-10.004001481.904710.6340717TTAAGTGGATAATTGG-
Nkx2-5#MA0063.100.006499043.093540.8827137TTAAGTGGATTAATTG+
tin#MA0247.110.008362783.980680.9938687TTAAGTGGACTCAAGTG+
Nobox#MA0125.1-10.01017374.842690.9986918TTAAGTGGATAATTGGT+
STB3#MA0390.110.01144035.445570.9986919TTAAGTGGACCAGAGTGAAAAATTTTGGAC-
GIS1#MA0306.100.01227555.843150.9986919TTAAGTGGATTTAGGGGT-
ZNF354C#MA0130.1-40.01342826.391830.9986915TTAAGTGGAGTGGAT-
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