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MacroAPE 1083:TBX3 f1: Difference between revisions

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9-110H6;0.625363!10828-111C9;0.20768!10788-110H5;0.482297!10792-110H9;0.406001!10765-110E9;0.775546!10829-111D1;0.66037!10830-111D2;0.434365!10831-111D3;0.233317!10832-111D4;0.052906!10833-111D5;0.0976173!10764-110E8;0.538328!10770-110F5;0.863636!10399-106A3;0.279305!10400-106A4;0.562745!10405-106A9;0.569108!10834-111D6;0.464777!10835-111D7;0.8262!10836-111D8;0.0343815!10837-111D9;0.472865!10699-109G6;0.0884684!10802-111A1;0.0859876!10796-110I4;0.505502!10010-101C1;0.182414!10810-111A9;0.114394!10421-106C7;0.312219!10708-109H6;0.158027!12235-129G3;0.169556!12236-129G4;0.405797!12237-129G5;0.348316!10167-103B5;0.211136!10151-102I7;0.845849!10428-106D5;0.999474!10795-110I3;0.386362!10805-111A4;0.462165!10052-101G7;0.917091!10189-103D9;0.568022!10589-108D4;0.947296!10425-106D2;0.620091!10427-106D4;0.766578!10702-109G9;0.0466635!10432-106D9;0.717904!10496-107C1;0.537372!10718-109I7;0.667645!10011-101C2;0.0566064!10053-101G8;0.115545!10686-109F2;0.27478!10084-102B3;0.717907!10012-101C3;0.856126!10085-102B4;0.699296!10482-107A5;0.513977!10419-106C5;0.286525!10080-102A8;0.830891!10760-110E4;0.322902!10709-109H7;0.874096!10710-109H8;0.368794!10703-109H1;0.449823!10719-109I8;0.109766!10642-109A3;0.0643401!10177-103C6;0.727729!10164-103B2;0.964277!10173-103C2;0.952872!10166-103B4;0.491066!10083-102B2;0.46897!10188-103D8;0.592583!10552-107I3;0.97945!10553-107I4;0.948866!10013-101C4;0.715971!10536-107G5;0.0154481!10618-108G6;0.515741!10423-106C9;0.737937!10785-110H2;0.602058!12238-129G6;0.326978!12239-129G7;0.899183!12240-129G8;0.398234!10416-106C2;0.621511!10801-110I9;0.0547915!10766-110F1;0.76264!10824-111C5;0.11182!10825-111C6;0.323174!10826-111C7;0.253001!10454-106G4;0.370417!10409-106B4;0.558448!10638-108I8;0.163098!10636-108I6;0.373359!10513-107D9;0.596843!10420-106C6;0.331906!10082-102B1;0.334922!10014-101C5;0.229144!10070-101I7;0.0526423!10452-106G2;0.348059!10453-106G3;0.18339!10449-106F8;0.173008!10042-101F6;0.217347!10069-101I6;0.469573!10193-103E4;0.111954!10631-108I1;0.727963!10438-106E6;0.326347!10488-107B2;0.92771!10196-103E7;0.489914!10071-101I8;0.0285324!10071-101I8;0.694307!10041-101F5;0.344237!10451-106G1;0.404427!10450-106F9;0.961305!10604-108F1;0.544919!10605-108F2;0.0585495!10606-108F3;0.064032!10603-108E9;0.0274106!10497-107C2;0.118636!10448-106F7;0.621663!10643-109A4;0.410482!10426-106D3;0.97921!10431-106D8;0.795644!10197-103E8;0.434147!10443-106F2;0.00463395!10815-111B5;0.864111!10816-111B6;0.897689!10817-111B7;0.817134!10015-101C6;0.950052!10410-106B5;0.0392832!10054-101G9;0.283505!10758-110E2;0.28654!10711-109H9;0.432331!10040-101F4;0.331416!10470-106I2;0.721548!10415-106C1;0.469089!10198-103E9;0.0981418!10614-108G2;0.192596!10612-108F9;0.960309!10549-107H9;0.253042!10615-108G3;0.0673561!10487-107B1;0.664079!10433-106E1;0.50159!10688-109F4;0.361703!10444-106F3;0.725768!10444-106F3;0.7677!10485-107A8;0.621014!10413-106B8;0.37184!10175-103C4;0.372655!10161-103A8;0.816745!12131-128D7;0.605067!10624-108H3;0.131527!10712-109I1;0.0965027!10205-103F7;0.421087!10206-103F8;0.0247332!10207-103F9;0.00163649!10050-101G5;0.182754!10051-101G6;0.000565653!10016-101C7;1.2564e-07!10046-101G1;0.000205846!10778-110G4;0.012122!10633-108I3;0.376849!10818-111B8;0.768759!10819-111B9;0.416536!10820-111C1;0.3422!10484-107A7;0.403469!10808-111A7;0.474523!10169-103B7;0.206996!10153-102I9;0.972668!13425-144D5;0.923938!13433-144E4;0.0325704!13437-144E8;0.0107764!11904-125F5;0.0220666!11905-125F6;0.0659287!10039-101F3;0.0292942!10791-110H8;0.778691!10017-101C8;0.782421!10045-101F9;0.0128107!10509-107D5;0.101952!10839-111E2;0.270877!10692-109F8;0.900334!10079-102A7;0.650423!10078-102A6;3.03014e-06!10721-110A1;5.30143e-05!10569-108B2;0.551943!10570-108B3;0.163202!10571-108B4;0.524068!10647-109A8;0.162438!10752-110D5;0.855827!10782-110G8;0.0737277!10726-110A6;0.694366!10018-101C9;0.85817!10086-102B5;0.059081!10182-103D2;0.847677!10165-103B3;0.916255!10499-107C4;0.728131!10408-106B3;0.350932!10019-101D1;0.566977!10068-101I5;0.652204!10075-102A3;0.651861!10077-102A5;0.957678!10727-110A7;0.429917!10775-110G1;0.197412!10412-106B7;0.483157!12231-129F8;0.88297!12232-129F9;0.159939!12233-129G1;0.145093!12234-129G2;0.149541!10414-106B9;0.225298!10170-103B8;0.0913447!10183-103D3;0.990214!10150-102I6;0.992719!10174-103C3;0.811044!10155-103A2;0.631429!10038-101F2;0.614686!10838-111E1;0.390714!10759-110E3;0.606723!10514-107E1;0.0509136!10465-106H6;0.518113!10691-109F7;0.0288308!10843-111E6;0.5105!10844-111E7;0.435502!11747-123G1;0.457925!11748-123G2;0.0602364!11749-123G3;0.0565135!11750-123G4;0.00381294!11751-123G5;0.391676!11840-124H4;0.0685297!11752-123G6;0.0512488!11753-123G7;0.257291!11754-123G8;0.0332838!11755-123G9;0.400185!11756-123H1;0.838891!11833-124G6;0.166933!11760-123H5;0.0253474!11836-124G9;0.0802157!11758-123H3;0.0714133!11835-124G8;0.0885031!11762-123H7;0.38053!11838-124H2;0.0392945!11757-123H2;0.255416!11759-123H4;0.165905!11761-123H6;0.266659!11842-124H6;0.269019!11837-124H1;0.140486!10568-108B1;0.473118!13230-141I8;0.974909!13231-141I9;0.218909!10696-109G3;0.340913!10493-107B7;0.977061!10494-107B8;0.788833!10850-111F4;0.675782!10851-111F5;0.565338!10852-111F6;0.101981!10853-111F7;0.433105!10854-111F8;0.39886!10855-111F9;0.876902!10856-111G1;0.963237!10847-111F1;0.910171!10846-111E9;0.805578!10848-111F2;0.647636!10845-111E8;0.479283!10857-111G2;0.366172!10858-111G3;0.768241!10156-103A3;0.241269!11901-125F2;0.846087!11902-125F3;0.0479146!11903-125F4;0.17482!10689-109F5;0.134681!10648-109A9;0.493629!10784-110H1;0.573701!10744-110C6;0.798606!10772-110F7;0.30551!10474-106I6;0.17332!10600-108E6;0.71404!10684-109E9;0.457352!12226-129F3;0.904461!12227-129F4;0.064925!10508-107D4;0.478855!10539-107G8;0.263649!10607-108F4;0.342393!10555-107I6;0.339322!10774-110F9;0.135134!10637-108I7;0.269299!10663-109C6;0.132314!10728-110A8;0.433557!10729-110A9;0.101693!10430-106D7;0.677206!10730-110B1;0.0876202!10813-111B3;0.0679669!10812-111B2;0.612622!10037-101F1;0.461934!10172-103C1;0.772106!10163-103B1;0.906903!10076-102A4;0.758027!10073-102A1;0.880859!10036-101E9;0.371446!10195-103E6;0.735953!10277-104E7;0.87096!10434-106E2;0.69442!10550-107I1;0.175698!10545-107H5;0.372857!10544-107H4;0.430591!10704-109H2;0.218046!10510-107D6;0.079792!10558-107I9;0.196368!10020-101D2;0.38012!10732-110B3;0.0917259!10049-101G4;0.744618!10698-109G5;0.539566!10437-106E5;0.782087!10417-106C3;0.291775!10035-101E8;0.203253!10171-103B9;0.665276!10157-103A4;0.862401!10034-101E7;0.800737!10072-101I9;0.643879!10199-103F1;0.322943!10200-103F2;0.914209!10697-109G4;0.106564!10723-110A3;0.249872!10179-103C8;0.794916!10160-103A7;0.752904!10180-103C9;0.624596!10162-103A9;0.60713!10021-101D3;0.718235!10840-111E3;0.0139269!10706-109H4;0.371872!10033-101E6;0.241097!10032-101E5;0.522267!10490-107B4;0.682091!10439-106E7;0.600746!10022-101D4;0.573878!10176-103C5;0.0812537!10469-106I1;0.927822!10067-101I4;0.792322!10411-106B6;0.545082!10471-106I3;0.0173158!10030-101E3;0.148565!10475-106I7;0.545888!10787-110H4;0.321914!10477-106I9;0.758415!10695-109G2;0.638579!11771-123I7;0.232377!11772-123I8;0.917757!11773-123I9;0.288456!10093-102C3;0.925534!10442-106F1;0.924185!10442-106F1;0.955445!10201-103F3;0.845066!10639-108I9;0.579355!11843-124H7;0.370451!11841-124H5;0.744807!10693-109F9;0.738475!10436-106E4;0.670171!10483-107A6;0.831701!10282-104F3;0.517104!10023-101D5;0.27882!10066-101I3;0.0606301!10065-101I2;0.132047!10800-110I8;0.120769!10610-108F7;0.326781!10841-111E4;0.576594!10541-107H1;0.856919!10842-111E5;0.00140378!10562-108A4;0.0725836!10024-101D6;0.681489!10064-101I1;0.151402!10609-108F6;0.142467!10048-101G3;0.759678!10781-110G7;0.189644!10181-103D1;0.650204!10159-103A6;0.56231!10056-101H2;0.384269!10737-110B8;0.391338!10025-101D7;0.606269!10044-101F8;0.410853!10424-106D1;0.626097!10463-106H4;0.248167!10616-108G4;0.768649!10486-107A9;0.109962!10062-101H8;0.869506!10202-103F4;0.944704!10158-103A5;0.891026!10441-106E9;0.300972!10031-101E4;0.675562!10063-101H9;0.73156!10063-101H9;0.407028!11763-123H8;0.688587!11765-123I1;0.375719!11768-123I4;0.355506!10807-111A6;0.661581!10790-110H7;0.123103!10798-110I6;0.251896!10786-110H3;0.878185!10591-108D6;0.0690715!10593-108D8;0.00149173!10590-108D5;0.241915!10026-101D8;0.0291525!10096-102C6;0.00690576!10168-103B6;0.284738!10154-103A1;0.886082!10209-103G2;0.661555!10061-101H7;0.11925!10027-101D9;0.320401!10043-101F7;0.992108!10783-110G9;0.708128!10028-101E1;0.235558!10060-101H6;0.33687!10203-103F5;0.341142!10059-101H5;0.0673319!10047-101G2;0.0582963!10029-101E2;0.311854!10058-101H4;0.0623956!10418-106C4;0.379036!10492-107B6;0.10584!10694-109G1;0.346928!10797-110I5;0.708022!10057-101H3;0.348438!10100-102D1;0.0951121!10055-101H1;0.0204179!10204-103F6;0.0525304!10191-103E2;0.197679!10563-108A5;0.628728
|name=TBX3_f1
|name=TBX3_f1
|tomtom_result=T#MA0009.1;-10;9.21437e-05;0.0438604;0.0869986;11;AGGTAGAGAATTAGGTGATAAAAA;CTAGGTGTGAA;+!YAP1#MA0415.1;-4;0.000211717;0.100777;0.0999476;20;AGGTAGAGAATTAGGTGATAAAAA;ACGAGCTTACGTAAGCAAAT;-!YPR015C#MA0435.1;-1;0.000506405;0.241049;0.159376;20;AGGTAGAGAATTAGGTGATAAAAA;TGTAAGGATTTACGTCTTCA;-!ZEB1#MA0103.1;-11;0.00153811;0.732139;0.363056;6;AGGTAGAGAATTAGGTGATAAAAA;CAGGTG;-!YAP6#MA0418.1;-5;0.00219142;1.04312;0.413812;19;AGGTAGAGAATTAGGTGATAAAAA;GTCGCTTACGTAATCAGACC;-!RORA_2#MA0072.1;-5;0.00347171;1.65253;0.54631;14;AGGTAGAGAATTAGGTGATAAAAA;TATAAGTAGGTCAA;+!TOD6#MA0350.1;-1;0.00441733;2.10265;0.57232;21;AGGTAGAGAATTAGGTGATAAAAA;AAAACGCGATGAGCTGTGCCT;-!sna#MA0086.1;-11;0.00581877;2.76974;0.585455;6;AGGTAGAGAATTAGGTGATAAAAA;CAGGTG;+!RORA_1#MA0071.1;-8;0.00632963;3.01291;0.585455;10;AGGTAGAGAATTAGGTGATAAAAA;ATCAAGGTCA;+!Pax4#MA0068.1;4;0.00751467;3.57698;0.585455;24;AGGTAGAGAATTAGGTGATAAAAA;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!SUT2#MA0400.1;-5;0.00826713;3.93515;0.585455;19;AGGTAGAGAATTAGGTGATAAAAA;AAATTTTCGGAGTTTATCAT;-!ARR1#MA0274.1;-8;0.00841452;4.00531;0.585455;8;AGGTAGAGAATTAGGTGATAAAAA;ATTCAAGT;-!Pdx1#MA0132.1;-8;0.0100134;4.76638;0.585455;6;AGGTAGAGAATTAGGTGATAAAAA;AATTAG;-!RPH1#MA0372.1;-10;0.0100557;4.78654;0.585455;8;AGGTAGAGAATTAGGTGATAAAAA;TTAGGGGT;-!bap#MA0211.1;-10;0.010464;4.98088;0.585455;7;AGGTAGAGAATTAGGTGATAAAAA;TTAAGTG;+!GIS1#MA0306.1;-9;0.0105413;5.01768;0.585455;9;AGGTAGAGAATTAGGTGATAAAAA;TTTAGGGGT;-!DOT6#MA0351.1;-1;0.0119062;5.66735;0.622288;21;AGGTAGAGAATTAGGTGATAAAAA;AGGATGCGATGAGGTGCAGAA;-!AG#MA0005.1;-4;0.0125227;5.96081;0.622288;11;AGGTAGAGAATTAGGTGATAAAAA;ACCAAATTTGG;-!RTG3#MA0376.1;-4;0.0132227;6.294;0.624218;20;AGGTAGAGAATTAGGTGATAAAAA;ATATTAGCACGTGCTTAGTC;+!ARO80#MA0273.1;-3;0.0140388;6.68245;0.631185;21;AGGTAGAGAATTAGGTGATAAAAA;GATAATTCTCGGCAAGTATGT;+!TBF1#MA0403.1;-10;0.0159146;7.57533;0.653301;8;AGGTAGAGAATTAGGTGATAAAAA;TTAGGGTT;-!SFL1#MA0377.1;-4;0.0171944;8.18455;0.676431;20;AGGTAGAGAATTAGGTGATAAAAA;TAGAGAATAGAAGAAATAAAA;+
}}
}}

Latest revision as of 13:57, 7 September 2012

Full Name: TBX3_f1

Motif matrix
POACGT
15.2222959502964561.292594953822440.74255454794055120.7425545479405512
21.98014546117480.05.4698141329433120.5500404058818896
30.00.99007273058744.4797414023559042.530185867056696
43.4896686717685040.00.99007273058743.520258597644096
54.3065912423538080.01.7132632964713921.9801454611748
60.01.98014546117486.01985453882520.0
74.3065912423538081.5401131364692882.1532956211769040.0
81.5401131364692882.9702181917622083.4896686717685040.0
95.4698141329433120.55004040588188960.99007273058740.9900727305874
103.4896686717685042.5301858670566960.99007273058740.9900727305874
110.55004040588188961.98014546117480.05.469814132943312
120.01.98014546117480.55004040588188965.469814132943312
138.00.00.00.0
140.00.08.00.0
151.1632228905895040.06.8367771094105040.0
160.00.00.08.0
170.03.4896686717685044.5103313282314960.0
184.0397090776503920.00.03.960290922349608
190.00.03.5202585976440964.479741402355904
206.2867367035286081.7132632964713920.00.0
216.01985453882520.01.98014546117480.0
224.1334410823517040.99007273058742.8764861870608960.0
234.4797414023559041.5401131364692880.01.9801454611748
244.5541094250006561.4107410732363520.797558588528741.237590913234256

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
T#MA0009.1-109.21437e-050.04386040.086998611AGGTAGAGAATTAGGTGATAAAAACTAGGTGTGAA+
YAP1#MA0415.1-40.0002117170.1007770.099947620AGGTAGAGAATTAGGTGATAAAAAACGAGCTTACGTAAGCAAAT-
YPR015C#MA0435.1-10.0005064050.2410490.15937620AGGTAGAGAATTAGGTGATAAAAATGTAAGGATTTACGTCTTCA-
ZEB1#MA0103.1-110.001538110.7321390.3630566AGGTAGAGAATTAGGTGATAAAAACAGGTG-
YAP6#MA0418.1-50.002191421.043120.41381219AGGTAGAGAATTAGGTGATAAAAAGTCGCTTACGTAATCAGACC-
RORA_2#MA0072.1-50.003471711.652530.5463114AGGTAGAGAATTAGGTGATAAAAATATAAGTAGGTCAA+
TOD6#MA0350.1-10.004417332.102650.5723221AGGTAGAGAATTAGGTGATAAAAAAAAACGCGATGAGCTGTGCCT-
sna#MA0086.1-110.005818772.769740.5854556AGGTAGAGAATTAGGTGATAAAAACAGGTG+
RORA_1#MA0071.1-80.006329633.012910.58545510AGGTAGAGAATTAGGTGATAAAAAATCAAGGTCA+
Pax4#MA0068.140.007514673.576980.58545524AGGTAGAGAATTAGGTGATAAAAAGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
SUT2#MA0400.1-50.008267133.935150.58545519AGGTAGAGAATTAGGTGATAAAAAAAATTTTCGGAGTTTATCAT-
ARR1#MA0274.1-80.008414524.005310.5854558AGGTAGAGAATTAGGTGATAAAAAATTCAAGT-
Pdx1#MA0132.1-80.01001344.766380.5854556AGGTAGAGAATTAGGTGATAAAAAAATTAG-
RPH1#MA0372.1-100.01005574.786540.5854558AGGTAGAGAATTAGGTGATAAAAATTAGGGGT-
bap#MA0211.1-100.0104644.980880.5854557AGGTAGAGAATTAGGTGATAAAAATTAAGTG+
GIS1#MA0306.1-90.01054135.017680.5854559AGGTAGAGAATTAGGTGATAAAAATTTAGGGGT-
DOT6#MA0351.1-10.01190625.667350.62228821AGGTAGAGAATTAGGTGATAAAAAAGGATGCGATGAGGTGCAGAA-
AG#MA0005.1-40.01252275.960810.62228811AGGTAGAGAATTAGGTGATAAAAAACCAAATTTGG-
RTG3#MA0376.1-40.01322276.2940.62421820AGGTAGAGAATTAGGTGATAAAAAATATTAGCACGTGCTTAGTC+
ARO80#MA0273.1-30.01403886.682450.63118521AGGTAGAGAATTAGGTGATAAAAAGATAATTCTCGGCAAGTATGT+
TBF1#MA0403.1-100.01591467.575330.6533018AGGTAGAGAATTAGGTGATAAAAATTAGGGTT-
SFL1#MA0377.1-40.01719448.184550.67643120AGGTAGAGAATTAGGTGATAAAAATAGAGAATAGAAGAAATAAAA+
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