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MacroAPE 1083:Motif ACAGTN: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;2272;0;0;0!02;0;2272;0;0!03;2272;0;0;0!04;0;0;2272;0!05;0;0;0;2272!06;568;568;568;568 |macroape_1083_sample_pvalues=11376-118A8;0.362!1132...")
 
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10H6;0.479824!10828-111C9;0.252465!10788-110H5;0.735494!10792-110H9;0.137488!10765-110E9;0.51517!10829-111D1;0.144701!10830-111D2;0.176176!10831-111D3;0.109153!10832-111D4;0.10007!10833-111D5;0.140527!10764-110E8;0.120188!10770-110F5;0.0820701!10399-106A3;0.121838!10400-106A4;0.0401916!10405-106A9;0.0440354!10834-111D6;0.0619708!10835-111D7;0.0349864!10836-111D8;0.441185!10837-111D9;0.132675!10699-109G6;0.142341!10802-111A1;0.326525!10796-110I4;0.161864!10010-101C1;0.266215!10810-111A9;0.18005!10421-106C7;0.149791!10708-109H6;0.425465!12235-129G3;0.253674!12236-129G4;0.51925!12237-129G5;0.734779!10167-103B5;0.377892!10151-102I7;0.200027!10428-106D5;0.138288!10795-110I3;0.644096!10805-111A4;0.142844!10052-101G7;0.101121!10189-103D9;0.371111!10589-108D4;0.733306!10425-106D2;0.800889!10427-106D4;0.91116!10702-109G9;0.351279!10432-106D9;0.60704!10496-107C1;0.18882!10718-109I7;0.61608!10011-101C2;0.0545252!10053-101G8;0.102671!10686-109F2;0.952925!10084-102B3;0.518593!10012-101C3;0.241015!10085-102B4;0.165661!10482-107A5;0.722805!10419-106C5;0.132338!10080-102A8;0.252295!10760-110E4;0.970747!10709-109H7;0.111536!10710-109H8;0.520927!10703-109H1;0.122947!10719-109I8;0.612694!10642-109A3;0.315786!10177-103C6;0.491952!10164-103B2;0.0854806!10173-103C2;0.100829!10166-103B4;0.0305519!10083-102B2;0.0173117!10188-103D8;0.0696922!10552-107I3;0.211926!10553-107I4;0.665505!10013-101C4;0.393827!10536-107G5;0.309323!10618-108G6;0.911337!10423-106C9;0.196086!10785-110H2;0.224163!12238-129G6;0.34822!12239-129G7;0.198103!12240-129G8;0.967095!10416-106C2;0.0576086!10801-110I9;0.142008!10766-110F1;0.19212!10824-111C5;0.239558!10825-111C6;0.291015!10826-111C7;0.276684!10454-106G4;0.312198!10409-106B4;0.349986!10638-108I8;0.34687!10636-108I6;0.541326!10513-107D9;0.337158!10420-106C6;0.210669!10082-102B1;0.665381!10014-101C5;0.978275!10070-101I7;0.648698!10452-106G2;0.606828!10453-106G3;0.848129!10449-106F8;0.50253!10042-101F6;0.498119!10069-101I6;0.0548031!10193-103E4;0.124312!10631-108I1;0.148575!10438-106E6;0.472164!10488-107B2;0.0942685!10196-103E7;0.756882!10071-101I8;0.0608007!10071-101I8;0.655009!10041-101F5;0.475971!10451-106G1;0.381844!10450-106F9;0.812167!10604-108F1;0.42658!10605-108F2;0.477502!10606-108F3;0.572501!10603-108E9;0.614468!10497-107C2;0.36327!10448-106F7;0.295089!10643-109A4;0.613152!10426-106D3;0.290524!10431-106D8;0.247506!10197-103E8;0.0515963!10443-106F2;0.179512!10815-111B5;0.474704!10816-111B6;0.347697!10817-111B7;0.630812!10015-101C6;0.355621!10410-106B5;0.301569!10054-101G9;0.512797!10758-110E2;0.0925874!10711-109H9;0.799397!10040-101F4;0.275738!10470-106I2;0.175366!10415-106C1;0.748935!10198-103E9;0.359022!10614-108G2;0.560291!10612-108F9;0.805557!10549-107H9;0.19093!10615-108G3;0.368463!10487-107B1;0.163166!10433-106E1;0.99535!10688-109F4;0.743684!10444-106F3;0.744077!10444-106F3;0.620331!10485-107A8;0.62414!10413-106B8;0.828186!10175-103C4;0.365037!10161-103A8;0.0822335!12131-128D7;0.0566745!10624-108H3;0.700496!10712-109I1;0.447492!10205-103F7;0.536275!10206-103F8;0.0660798!10207-103F9;0.0534011!10050-101G5;0.18419!10051-101G6;0.188614!10016-101C7;0.0383504!10046-101G1;0.046385!10778-110G4;0.0464024!10633-108I3;0.37754!10818-111B8;0.370722!10819-111B9;0.756375!10820-111C1;0.720387!10484-107A7;0.780505!10808-111A7;0.507569!10169-103B7;0.253196!10153-102I9;0.111268!13425-144D5;0.106022!13433-144E4;0.0463189!13437-144E8;0.0403237!11904-125F5;0.0407319!11905-125F6;0.198049!10039-101F3;0.43552!10791-110H8;0.20236!10017-101C8;0.338764!10045-101F9;0.599442!10509-107D5;0.436158!10839-111E2;0.281353!10692-109F8;0.950914!10079-102A7;0.197314!10078-102A6;0.121984!10721-110A1;0.119356!10569-108B2;0.0482987!10570-108B3;0.420792!10571-108B4;0.855887!10647-109A8;0.437444!10752-110D5;0.576749!10782-110G8;0.442554!10726-110A6;0.130158!10018-101C9;0.430968!10086-102B5;0.271962!10182-103D2;0.676153!10165-103B3;0.117241!10499-107C4;0.0912283!10408-106B3;0.888803!10019-101D1;0.344977!10068-101I5;0.526667!10075-102A3;0.246986!10077-102A5;0.545059!10727-110A7;0.704606!10775-110G1;0.555848!10412-106B7;0.19033!12231-129F8;0.393085!12232-129F9;0.250674!12233-129G1;0.411115!12234-129G2;0.334784!10414-106B9;0.245813!10170-103B8;0.536182!10183-103D3;0.116595!10150-102I6;0.116774!10174-103C3;0.104695!10155-103A2;0.146708!10038-101F2;0.0747483!10838-111E1;0.107307!10759-110E3;0.803186!10514-107E1;0.426945!10465-106H6;0.422995!10691-109F7;0.430729!10843-111E6;0.857196!10844-111E7;0.408064!11747-123G1;0.502527!11748-123G2;0.573383!11749-123G3;0.387213!11750-123G4;0.196179!11751-123G5;0.212516!11840-124H4;0.166654!11752-123G6;0.152029!11753-123G7;0.0963389!11754-123G8;0.181729!11755-123G9;0.613228!11756-123H1;0.908265!11833-124G6;0.637968!11760-123H5;0.0786684!11836-124G9;0.850739!11758-123H3;0.422863!11835-124G8;0.490565!11762-123H7;0.274506!11838-124H2;0.773223!11757-123H2;0.650485!11759-123H4;0.79425!11761-123H6;0.638938!11842-124H6;0.661804!11837-124H1;0.194477!10568-108B1;0.283645!13230-141I8;0.316453!13231-141I9;0.402162!10696-109G3;0.492236!10493-107B7;0.189153!10494-107B8;0.499644!10850-111F4;0.728714!10851-111F5;0.42078!10852-111F6;0.834068!10853-111F7;0.411473!10854-111F8;0.783588!10855-111F9;0.23482!10856-111G1;0.180438!10847-111F1;0.646606!10846-111E9;0.0714332!10848-111F2;0.0183791!10845-111E8;0.248107!10857-111G2;0.440683!10858-111G3;0.548704!10156-103A3;0.351882!11901-125F2;0.0893214!11902-125F3;0.686768!11903-125F4;0.414579!10689-109F5;0.557654!10648-109A9;0.314319!10784-110H1;0.258304!10744-110C6;0.415057!10772-110F7;0.140546!10474-106I6;0.143448!10600-108E6;0.454171!10684-109E9;0.359271!12226-129F3;0.497847!12227-129F4;0.641033!10508-107D4;0.419004!10539-107G8;0.89098!10607-108F4;0.813829!10555-107I6;0.475104!10774-110F9;0.25758!10637-108I7;0.0918599!10663-109C6;0.816596!10728-110A8;0.908152!10729-110A9;0.201879!10430-106D7;0.845976!10730-110B1;0.804875!10813-111B3;0.691983!10812-111B2;0.487184!10037-101F1;0.507253!10172-103C1;0.163715!10163-103B1;0.125367!10076-102A4;0.111923!10073-102A1;0.18457!10036-101E9;0.492101!10195-103E6;0.282274!10277-104E7;0.119181!10434-106E2;0.018434!10550-107I1;0.446895!10545-107H5;0.351398!10544-107H4;0.332333!10704-109H2;0.12138!10510-107D6;0.0722318!10558-107I9;0.316317!10020-101D2;0.473784!10732-110B3;0.42718!10049-101G4;0.791061!10698-109G5;0.809388!10437-106E5;0.119627!10417-106C3;0.989162!10035-101E8;0.548989!10171-103B9;0.205171!10157-103A4;0.108093!10034-101E7;0.108425!10072-101I9;0.159804!10199-103F1;0.701093!10200-103F2;0.615405!10697-109G4;0.070084!10723-110A3;0.479958!10179-103C8;0.0806623!10160-103A7;0.0614539!10180-103C9;0.0775178!10162-103A9;0.145429!10021-101D3;0.168736!10840-111E3;0.488471!10706-109H4;0.458227!10033-101E6;0.0155455!10032-101E5;0.130354!10490-107B4;0.23672!10439-106E7;0.392388!10022-101D4;0.21826!10176-103C5;0.263059!10469-106I1;0.0950248!10067-101I4;0.97759!10411-106B6;0.684875!10471-106I3;0.657507!10030-101E3;0.734867!10475-106I7;0.186359!10787-110H4;0.407181!10477-106I9;0.26404!10695-109G2;0.446106!11771-123I7;0.588169!11772-123I8;0.825679!11773-123I9;0.712381!10093-102C3;0.987579!10442-106F1;0.935251!10442-106F1;0.652712!10201-103F3;0.998801!10639-108I9;0.0312008!11843-124H7;0.968871!11841-124H5;0.177936!10693-109F9;0.252919!10436-106E4;0.350106!10483-107A6;0.332816!10282-104F3;0.278573!10023-101D5;0.053157!10066-101I3;0.0224337!10065-101I2;0.349942!10800-110I8;0.332992!10610-108F7;0.458336!10841-111E4;0.91361!10541-107H1;0.451048!10842-111E5;0.916945!10562-108A4;0.434164!10024-101D6;0.711607!10064-101I1;0.80223!10609-108F6;0.958808!10048-101G3;0.930083!10781-110G7;0.0621061!10181-103D1;0.879664!10159-103A6;0.0297104!10056-101H2;0.0263391!10737-110B8;0.179974!10025-101D7;0.590999!10044-101F8;0.755483!10424-106D1;0.673407!10463-106H4;0.390582!10616-108G4;0.461693!10486-107A9;0.643707!10062-101H8;0.464482!10202-103F4;0.907123!10158-103A5;0.400858!10441-106E9;0.0257001!10031-101E4;0.814849!10063-101H9;0.280764!10063-101H9;0.721039!11763-123H8;0.242223!11765-123I1;0.276664!11768-123I4;0.379402!10807-111A6;0.537607!10790-110H7;0.0314327!10798-110I6;0.0484901!10786-110H3;0.0451963!10591-108D6;0.0175414!10593-108D8;0.0885514!10590-108D5;0.049396!10026-101D8;0.0851297!10096-102C6;0.866252!10168-103B6;0.942409!10154-103A1;0.0582377!10209-103G2;0.0476117!10061-101H7;0.150044!10027-101D9;0.243997!10043-101F7;0.933947!10783-110G9;0.721355!10028-101E1;0.343882!10060-101H6;0.148442!10203-103F5;0.202336!10059-101H5;0.171904!10047-101G2;0.125449!10029-101E2;0.703549!10058-101H4;0.732398!10418-106C4;0.259181!10492-107B6;0.186216!10694-109G1;0.538232!10797-110I5;0.821527!10057-101H3;0.605785!10100-102D1;0.246116!10055-101H1;0.295178!10204-103F6;0.51432!10191-103E2;0.254721!10563-108A5;0.277267
|name=motif_ACAGTN
|name=motif_ACAGTN
|tomtom_result=MET4#MA0335.1;2;0.00400784;1.90773;1;6;ACAGTA;CCACAGTT;-!odd#MA0454.1;1;0.00580153;2.76153;1;6;ACAGTA;AACAGTAGCAG;+!GAL4#MA0299.1;6;0.00928732;4.42076;1;6;ACAGTA;CGGGGAACAGTACTC;+!ovo#MA0126.1;4;0.0125187;5.9589;1;5;ACAGTA;AGTAACAGT;+!prd#MA0239.1;4;0.0125187;5.9589;1;5;ACAGTA;AGTAACAGT;+!Foxq1#MA0040.1;5;0.0184392;8.77706;1;6;ACAGTA;AATAAACAATA;-!myb.Ph3#MA0054.1;2;0.019995;9.51762;1;6;ACAGTA;AAACGGTTA;-
}}
}}

Latest revision as of 14:03, 7 September 2012

Full Name: motif_ACAGTN

Motif matrix
POACGT
012272000
020227200
032272000
040022720
050002272
06568568568568

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
MET4#MA0335.120.004007841.9077316ACAGTACCACAGTT-
odd#MA0454.110.005801532.7615316ACAGTAAACAGTAGCAG+
GAL4#MA0299.160.009287324.4207616ACAGTACGGGGAACAGTACTC+
ovo#MA0126.140.01251875.958915ACAGTAAGTAACAGT+
prd#MA0239.140.01251875.958915ACAGTAAGTAACAGT+
Foxq1#MA0040.150.01843928.7770616ACAGTAAATAAACAATA-
myb.Ph3#MA0054.120.0199959.5176216ACAGTAAAACGGTTA-
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