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MacroAPE 1083:CNhs11051 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;401.0786089181747;473.9618193174458;304.20598887142125;891.4692859588097!2;14.264318570381702;796.7195575885316;753.1236815492474;506.608145...")
 
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0788-110H5;0.419352!10792-110H9;0.445423!10765-110E9;0.483182!10829-111D1;0.28941!10830-111D2;0.727202!10831-111D3;0.244994!10832-111D4;0.391258!10833-111D5;0.42137!10764-110E8;0.221992!10770-110F5;0.193908!10399-106A3;0.353004!10400-106A4;0.349037!10405-106A9;0.328841!10834-111D6;0.363152!10835-111D7;0.43644!10836-111D8;0.508522!10837-111D9;0.542236!10699-109G6;0.275352!10802-111A1;0.137606!10796-110I4;0.248301!10010-101C1;0.272794!10810-111A9;0.167196!10421-106C7;0.274311!10708-109H6;0.237923!12235-129G3;0.22672!12236-129G4;0.467085!12237-129G5;0.896155!10167-103B5;0.930214!10151-102I7;0.282582!10428-106D5;0.259348!10795-110I3;0.584065!10805-111A4;0.429401!10052-101G7;0.189419!10189-103D9;0.208562!10589-108D4;0.256375!10425-106D2;0.303115!10427-106D4;0.247453!10702-109G9;0.293764!10432-106D9;0.283271!10496-107C1;0.107157!10718-109I7;0.258254!10011-101C2;0.145881!10053-101G8;0.173302!10686-109F2;0.985051!10084-102B3;0.356425!10012-101C3;0.231532!10085-102B4;0.191291!10482-107A5;0.447431!10419-106C5;0.32338!10080-102A8;0.291261!10760-110E4;0.231874!10709-109H7;0.0666076!10710-109H8;0.126843!10703-109H1;0.210865!10719-109I8;0.265502!10642-109A3;0.558083!10177-103C6;0.464801!10164-103B2;0.193655!10173-103C2;0.196554!10166-103B4;0.185729!10083-102B2;0.197931!10188-103D8;0.275816!10552-107I3;0.225579!10553-107I4;0.40437!10013-101C4;0.230979!10536-107G5;0.204355!10618-108G6;0.287707!10423-106C9;0.195277!10785-110H2;0.195537!12238-129G6;0.0972475!12239-129G7;0.784418!12240-129G8;0.771533!10416-106C2;0.622362!10801-110I9;0.289576!10766-110F1;0.190646!10824-111C5;0.250716!10825-111C6;0.356072!10826-111C7;0.350487!10454-106G4;0.335167!10409-106B4;0.311261!10638-108I8;0.169654!10636-108I6;0.164803!10513-107D9;0.126824!10420-106C6;0.0982484!10082-102B1;0.292796!10014-101C5;0.238191!10070-101I7;0.234061!10452-106G2;0.334455!10453-106G3;0.297472!10449-106F8;0.30436!10042-101F6;0.323207!10069-101I6;0.178897!10193-103E4;0.15577!10631-108I1;0.159914!10438-106E6;0.244379!10488-107B2;0.209302!10196-103E7;0.393501!10071-101I8;0.215365!10071-101I8;0.33585!10041-101F5;0.323244!10451-106G1;0.162835!10450-106F9;0.181616!10604-108F1;0.305715!10605-108F2;0.414807!10606-108F3;0.416811!10603-108E9;0.611821!10497-107C2;0.618509!10448-106F7;0.133465!10643-109A4;0.261442!10426-106D3;0.468125!10431-106D8;0.0978411!10197-103E8;0.0832146!10443-106F2;0.26235!10815-111B5;0.177074!10816-111B6;0.251047!10817-111B7;0.261986!10015-101C6;0.234832!10410-106B5;0.219365!10054-101G9;0.308316!10758-110E2;0.178402!10711-109H9;0.317378!10040-101F4;0.287427!10470-106I2;0.235589!10415-106C1;0.147239!10198-103E9;0.104432!10614-108G2;0.232306!10612-108F9;0.284773!10549-107H9;0.127285!10615-108G3;0.280619!10487-107B1;0.603901!10433-106E1;0.542789!10688-109F4;0.546539!10444-106F3;0.243858!10444-106F3;0.877116!10485-107A8;0.833897!10413-106B8;0.293465!10175-103C4;0.258273!10161-103A8;0.176716!12131-128D7;0.136789!10624-108H3;0.248713!10712-109I1;0.745566!10205-103F7;0.379975!10206-103F8;0.114363!10207-103F9;0.0821039!10050-101G5;0.0402827!10051-101G6;0.189947!10016-101C7;0.089746!10046-101G1;0.0636933!10778-110G4;0.0958619!10633-108I3;0.176809!10818-111B8;0.414956!10819-111B9;0.214577!10820-111C1;0.209441!10484-107A7;0.226462!10808-111A7;0.504151!10169-103B7;0.295039!10153-102I9;0.211356!13425-144D5;0.221921!13433-144E4;0.101169!13437-144E8;0.0732621!11904-125F5;0.0807094!11905-125F6;0.0856067!10039-101F3;0.0584915!10791-110H8;0.225909!10017-101C8;0.133953!10045-101F9;0.19643!10509-107D5;0.217173!10839-111E2;0.317866!10692-109F8;0.174449!10079-102A7;0.118407!10078-102A6;0.106667!10721-110A1;0.0716393!10569-108B2;0.366869!10570-108B3;0.227033!10571-108B4;0.262872!10647-109A8;0.134418!10752-110D5;0.372073!10782-110G8;0.323174!10726-110A6;0.795169!10018-101C9;0.422484!10086-102B5;0.128134!10182-103D2;0.247189!10165-103B3;0.184123!10499-107C4;0.170996!10408-106B3;0.302116!10019-101D1;0.0913146!10068-101I5;0.355223!10075-102A3;0.187197!10077-102A5;0.349639!10727-110A7;0.408842!10775-110G1;0.0628687!10412-106B7;0.265045!12231-129F8;0.306389!12232-129F9;0.262904!12233-129G1;0.202755!12234-129G2;0.224986!10414-106B9;0.22973!10170-103B8;0.22579!10183-103D3;0.234619!10150-102I6;0.226754!10174-103C3;0.227645!10155-103A2;0.167368!10038-101F2;0.16942!10838-111E1;0.181533!10759-110E3;0.240371!10514-107E1;0.281885!10465-106H6;0.306055!10691-109F7;0.475793!10843-111E6;0.0581246!10844-111E7;0.388795!11747-123G1;0.452597!11748-123G2;0.309658!11749-123G3;0.354681!11750-123G4;0.1568!11751-123G5;0.0744644!11840-124H4;0.107563!11752-123G6;0.189822!11753-123G7;0.943053!11754-123G8;0.25911!11755-123G9;0.179087!11756-123H1;0.62492!11833-124G6;0.267019!11760-123H5;0.989047!11836-124G9;0.58785!11758-123H3;0.0585059!11835-124G8;0.274596!11762-123H7;0.415768!11838-124H2;0.800794!11757-123H2;0.585051!11759-123H4;0.19236!11761-123H6;0.145886!11842-124H6;0.440182!11837-124H1;0.128938!10568-108B1;0.30007!13230-141I8;0.812753!13231-141I9;0.360188!10696-109G3;0.292762!10493-107B7;0.449035!10494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|name=CNhs11051_bu_f2
|name=CNhs11051_bu_f2
|tomtom_result=SOK2#MA0385.1;0;0.00937972;4.46475;1;9;TCCCTGTGA;TGCCTGCAGGT;-!RUNX1#MA0002.2;-1;0.0186655;8.88478;1;8;TCCCTGTGA;GTCTGTGGTTT;+
}}
}}

Latest revision as of 14:37, 7 September 2012

Full Name: CNhs11051_bu_f2

Motif matrix
POACGT
1401.0786089181747473.9618193174458304.20598887142125891.4692859588097
214.264318570381702796.7195575885316753.1236815492474506.6081453576908
317.992253885214191064.5731792615377298.88243318093333689.2678367381673
40.02070.71570306585270.00.0
50.00.00.02070.7157030658527
60.00.02070.71570306585270.0
75.102680058773121981.28820184543195.1026800587731211079.222141102873
8264.86456742694816714.8496160735233833.3881147093164257.61340485606365
9689.3621461326734554.4387998193895216.5805831865511610.3341739272364

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SOK2#MA0385.100.009379724.4647519TCCCTGTGATGCCTGCAGGT-
RUNX1#MA0002.2-10.01866558.8847818TCCCTGTGAGTCTGTGGTTT+
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