FFCP PHASE1:Mm9::chr1:36330272..36330288,-: Difference between revisions
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|id=chr1:36330272..36330288,- | |id=chr1:36330272..36330288,- | ||
|ontology_enrichment_celltype=CL:0000063!1.99e-08!66;CL:0000988!2.65e-08!32;CL:0002032!2.65e-08!32;CL:0000037!2.65e-08!32;CL:0000566!2.65e-08!32;CL:0000837!2.65e-08!32 | |ontology_enrichment_celltype=CL:0000063!1.99e-08!66;CL:0000988!2.65e-08!32;CL:0002032!2.65e-08!32;CL:0000037!2.65e-08!32;CL:0000566!2.65e-08!32;CL:0000837!2.65e-08!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.50e-08,32;CL:0002032,1.50e-08,32;CL:0000037,1.50e-08,32;CL:0000837,1.50e-08,32;CL:0000738,8.38e-07,17;CL:0002087,8.38e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.31e-16!128;UBERON:0001555!3.31e-16!128;UBERON:0007026!3.31e-16!128;UBERON:0004119!1.34e-15!130;UBERON:0000925!1.34e-15!130;UBERON:0006595!1.34e-15!130;UBERON:0004921!3.70e-15!126;UBERON:0004185!3.70e-15!126;UBERON:0005409!6.84e-14!59;UBERON:0000160!1.35e-10!43;UBERON:0000344!7.07e-10!15;UBERON:0001242!9.57e-09!13;UBERON:0000060!9.57e-09!13;UBERON:0001262!9.57e-09!13;UBERON:0004786!9.57e-09!13;UBERON:0004923!2.31e-08!24;UBERON:0002371!1.26e-07!16;UBERON:0002405!3.17e-07!70;UBERON:0000926!3.97e-07!193;UBERON:0004120!3.97e-07!193;UBERON:0006603!3.97e-07!193 | |ontology_enrichment_uberon=UBERON:0001007!3.31e-16!128;UBERON:0001555!3.31e-16!128;UBERON:0007026!3.31e-16!128;UBERON:0004119!1.34e-15!130;UBERON:0000925!1.34e-15!130;UBERON:0006595!1.34e-15!130;UBERON:0004921!3.70e-15!126;UBERON:0004185!3.70e-15!126;UBERON:0005409!6.84e-14!59;UBERON:0000160!1.35e-10!43;UBERON:0000344!7.07e-10!15;UBERON:0001242!9.57e-09!13;UBERON:0000060!9.57e-09!13;UBERON:0001262!9.57e-09!13;UBERON:0004786!9.57e-09!13;UBERON:0004923!2.31e-08!24;UBERON:0002371!1.26e-07!16;UBERON:0002405!3.17e-07!70;UBERON:0000926!3.97e-07!193;UBERON:0004120!3.97e-07!193;UBERON:0006603!3.97e-07!193 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,6.86e-17,116;UBERON:0001555,6.86e-17,116;UBERON:0007026,6.86e-17,116;UBERON:0004119,4.52e-16,118;UBERON:0000925,4.52e-16,118;UBERON:0006595,4.52e-16,118;UBERON:0005409,7.92e-16,47;UBERON:0004921,8.33e-16,114;UBERON:0000160,7.12e-13,31;UBERON:0000344,5.12e-10,15;UBERON:0001242,7.24e-09,13;UBERON:0001262,7.24e-09,13;UBERON:0004786,7.24e-09,13;UBERON:0004923,3.97e-08,24;UBERON:0002371,9.95e-08,16 | |||
|phase1_expression=0.480446541314382,870.693642060206,883.153523655089,514.491623432918,781.898234446248,303.189965072873,247.395786390662,49.5833562015653,152.0518199238,118.670714845251,21.7446819646391,8.85470964848234,20.7152883216759,10.9275503023747,18.3210368998615,17.2103977281352,13.2916756844348,83.1242805718956,82.1315457298375,76.3901373236454,4.84746753861098,34.652541969109,33.4335730097837,170.711915120565,182.609787729467,667.257542301654,648.727566215567,466.279747532264,175.391616158233,230.103508470817,292.462543554347,0.635030673459631,0,0,39.5726719059246,24.2702582223399,29.6045566580435,144.81194423497,70.320181007142,92.1401789393885,512.349626075013,250.67769297975,166.044540736655,0.755380907853464,0.608261587317087,0.183546752161682,0,0,0,0,0,0,195.970083875436,110.255045585724,157.964085596958,1.80081605225163,3.15186783932632,2.06268836910977,0,0,0,0,0,136.334807168132,207.661936139065,178.330508851471,36.251613372727,30.3532461204028,0.103689612308478,0,0,0.571301968807607,0.883474163806454,0,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0.589257170947335,0.142371680799103,0.372798891650601,12.1919171266426,0,158.555875319818,30.1148356943485,3.39985666853875,0,5.19821133958135,2.24013443548668,18.3982190372595,0,0,0,0.14084341977668,0,0,0,7.79367747640371,8.61423542615335,13.1436355703844,45.9019196470621,46.0909432891966,13.9535610720935,3.81667718885499,4.56698217468212,2.30615497256059,3.46662073271032,3.76283862834255,5.78066320116507,0.741584903203122,5.78397427679647,26.5383165584962,2.75003644910596,6.40440403535141,10.1823803158397,55.9175283654366,0.292780797011547,0.41889341362691,182.651794474143,103.041007075091,92.3850205729848,82.8497880516382,0.299581278809645,0.915001205637253,0.125654352112864,0.521472960576829,0.767146371990992,0.83115217823824,0.162241263067758,2.85150218780886,17.416975885413,4.80173241023982,1.68353484709179,0.910843100738926,0.689706313300419,0.900310649026746,0.90422890701429,0.544291993210623,0.384341160854549,0.374806898238915,0.517406741478031,0.215567992932842,0.189106080167819,1.40760899331159,1.97276159184817,1.11218899690239,2.089512999133,2.88094990971121,2.58744546864041,41.4305780514809,30.8817488537658,23.8697339492298,2.27838349789052,2.81431271977315,3.96136535214233,2.13070262026689,4.72234156193769,4.16521204795921,1.86027155800326,5.633741429392,1.75148013550754,3.29119699826961,7.71587081171748,3.56702762001765,4.82459958503597,11.8557062257167,7.64976586934119,0.630869845692382,0.514523061896422,260.039582208249,117.944952731941,1.70630600428187,4.64473343720877,7.08771037271513,11.2942773789072,10.4517680607089,12.3646656973163,124.326614124662,17.1286912912971,18.8501406600202,19.2987777879916,20.4712291475076,119.542981351011,105.9076444386,123.666730690962,10.8110703543257,12.3388393618507,14.6520056375005,8.5533557695032,15.3222464862424,7.99548346749632,11.5090497566148,5.75679577120448,9.57692239832386,8.26760998276064,10.9687472022245,3.50374722003798,2.75182593158484,2.69834534861824,4.46292267054706,7.71766911207734,6.11102044275408,8.91858026097513,5.67473293712624,10.158772287959,27.3159592401974,21.5841749647732,13.7296576170407,10.8608917517258,10.9432422248366,9.16642690590398,26.6044593839911,1.51593129416388,3.91115943460862,4.58311731593008,3.98973422090454,12.8979818230198,19.5195785526531,8.19561321002755,16.0787846988315,9.30151696524855,7.17546458958692,31.297893110706,32.1194066270566,16.3453436197108,94.9985088817415,135.432515270859,8.35999264132362,5.24279817978992,0.80275294993896,0.468846746368813,0,4.03953483526997,3.78609863299508,3.51394869866975,1.50796378412959,2.15071918157297,2.22798674082394,1.98153571552183,2.42886421004937,4.38383786866968,3.55759000151871,0,6.67118400478862,4.62970569534864,2.28041743095006,13.6925202067204,2.65490276679926,1.94224508923985,3.62788268357701,1.88605079755898,4.72483028609236,5.53383266299069,6.46070732920553,9.45187696641514,9.62542921638748,5.05658812697306,4.21674434299995,5.15677716240934,3.74483566329167,0.36012218806262,0.905510786479282,2.7863814554107,1.06404140185364,3.21063871683727,1.48094118541909,2.43571959291679,2.58138878870081,0.847328283455281,2.8668691747145,3.79238381765404,0.484393280087717,1.26657142349127,0.835606408021955,1.14898629821543,69.3724391179045,2.03967832211561,28.8771788548371,9.90656966223468,10.926477114813,11.6788443342908,15.9932246433599,20.590035588587,427.835708294534,315.170670632878,343.288734930189,21.9574242143476,2.37251995185852,6.30290348093231,10.3685127188929,14.8452690170273,17.250642535948,16.9929076444874,21.407245032862,28.5313976762592,68.825550817942,9.32008969630389,0,0.897099276263873,0.66183396182839,0.388902376688095,1.29159823477731,0.506868376472335,1.05621514781179,0.781226309063701,0.838874755405687,0.483168241652012,0.576060012515731,4.74016680942267,5.6763060281246,2.67048488628551,2.20865399062252,2.50637373934474,2.582857612156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| ||
|short_description=p1@Neurl3 | |short_description=p1@Neurl3 | ||
}} | }} |
Revision as of 18:35, 14 November 2012
Short description: | p1@Neurl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Neurl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -2bp_to_ENSMUST00000056946, NM_153408, uc007aps.1, uc007apt.1_5end |
EntrezGene: | Neurl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.50e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.50e-08 | 32 |
hematopoietic stem cell | 1.50e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.50e-08 | 32 |
leukocyte | 8.38e-07 | 17 |
nongranular leukocyte | 8.38e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
digestive system | 6.86e-17 | 116 |
digestive tract | 6.86e-17 | 116 |
primitive gut | 6.86e-17 | 116 |
endoderm-derived structure | 4.52e-16 | 118 |
endoderm | 4.52e-16 | 118 |
presumptive endoderm | 4.52e-16 | 118 |
gastrointestinal system | 7.92e-16 | 47 |
subdivision of digestive tract | 8.33e-16 | 114 |
intestine | 7.12e-13 | 31 |
mucosa | 5.12e-10 | 15 |
intestinal mucosa | 7.24e-09 | 13 |
wall of intestine | 7.24e-09 | 13 |
gastrointestinal system mucosa | 7.24e-09 | 13 |
organ component layer | 3.97e-08 | 24 |
bone marrow | 9.95e-08 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.