FFCP PHASE1:Hg19::chr12:127256819..127256831,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000542!5.93e-18!53;CL:0000051!5.93e-18!53;CL:0000791!3.46e-17!18;CL:0000789!3.46e-17!18;CL:0002420!3.46e-17!18;CL:0002419!3.46e-17!18;CL:0000790!3.46e-17!18;CL:0000838!5.32e-17!52;CL:0000084!3.33e-12!25;CL:0000827!3.33e-12!25;CL:0000625!7.42e-12!11;CL:0002087!4.31e-10!119;CL:0000738!2.16e-08!140;CL:0002031!3.16e-07!124 | |ontology_enrichment_celltype=CL:0000542!5.93e-18!53;CL:0000051!5.93e-18!53;CL:0000791!3.46e-17!18;CL:0000789!3.46e-17!18;CL:0002420!3.46e-17!18;CL:0002419!3.46e-17!18;CL:0000790!3.46e-17!18;CL:0000838!5.32e-17!52;CL:0000084!3.33e-12!25;CL:0000827!3.33e-12!25;CL:0000625!7.42e-12!11;CL:0002087!4.31e-10!119;CL:0000738!2.16e-08!140;CL:0002031!3.16e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000623;6.17e-21;3!CL:0000791;8.84e-13;18!CL:0000789;8.84e-13;18!CL:0002419;8.84e-13;18!CL:0002149;1.55e-10;6!CL:0002255;1.55e-10;6!CL:0000625;7.44e-10;11!CL:0000084;4.66e-09;25!CL:0000542;2.63e-08;53!CL:0002127;5.58e-08;1!CL:0000911;5.58e-08;1!CL:0000319;5.58e-08;1!CL:0000814;5.58e-08;1 | |ontology_enrichment_celltype_v019=CL:0000623;6.17e-21;3!CL:0000791;8.84e-13;18!CL:0000789;8.84e-13;18!CL:0002419;8.84e-13;18!CL:0002149;1.55e-10;6!CL:0002255;1.55e-10;6!CL:0000625;7.44e-10;11!CL:0000084;4.66e-09;25!CL:0000542;2.63e-08;53!CL:0002127;5.58e-08;1!CL:0000911;5.58e-08;1!CL:0000319;5.58e-08;1!CL:0000814;5.58e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.40e-21,3;CL:0000825,2.40e-21,3;CL:0000542,5.64e-16,53;CL:0000051,5.64e-16,53;CL:0000838,1.05e-13,52;CL:0000791,8.88e-13,18;CL:0000789,8.88e-13,18;CL:0002420,8.88e-13,18;CL:0002419,8.88e-13,18;CL:0000790,8.88e-13,18;CL:0002149,1.43e-10,6;CL:0002255,1.43e-10,6;CL:0000625,6.96e-10,11;CL:0000084,4.68e-09,25;CL:0000827,4.68e-09,25;CL:0002087,1.22e-08,115;CL:0000319,2.90e-08,1;CL:0002127,5.05e-08,1;CL:0000914,5.05e-08,1;CL:0000911,5.05e-08,1;CL:0000814,5.05e-08,1;CL:0002042,5.05e-08,1;CL:0002039,5.05e-08,1;CL:0002040,5.05e-08,1;CL:0002041,5.05e-08,1;CL:0002031,5.83e-07,120;CL:0000738,6.52e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;8.84e-13;18!CL:0000051;2.63e-08;53 | |ontology_enrichment_development_v019=CL:0000790;8.84e-13;18!CL:0000051;2.63e-08;53 | ||
|ontology_enrichment_disease=DOID:0050687!2.42e-07!143;DOID:1749!5.34e-07!14;DOID:162!8.48e-07!235 | |ontology_enrichment_disease=DOID:0050687!2.42e-07!143;DOID:1749!5.34e-07!14;DOID:162!8.48e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3001;1.55e-10;6!DOID:0060085;2.04e-08;1!DOID:3165;2.04e-08;1!DOID:0060121;2.04e-08;1!DOID:2438;2.04e-08;1!DOID:4418;2.04e-08;1!DOID:3030;5.58e-08;1!DOID:12603;5.58e-08;1 | |ontology_enrichment_disease_v019=DOID:3001;1.55e-10;6!DOID:0060085;2.04e-08;1!DOID:3165;2.04e-08;1!DOID:0060121;2.04e-08;1!DOID:2438;2.04e-08;1!DOID:4418;2.04e-08;1!DOID:3030;5.58e-08;1!DOID:12603;5.58e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,1.43e-10,6;DOID:0060085,1.91e-08,1;DOID:3165,1.91e-08,1;DOID:0060121,1.91e-08,1;DOID:2438,1.91e-08,1;DOID:4418,1.91e-08,1;DOID:3030,2.90e-08,1;DOID:12603,1.06e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@LOC387895 | |short_description=p2@LOC387895 | ||
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Revision as of 18:34, 18 November 2012
Short description: | p2@LOC387895 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC387895_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000536517, NR_033878_5end |
EntrezGene: | LOC387895 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.40e-21 | 3 |
pro-NK cell | 2.40e-21 | 3 |
lymphocyte | 5.64e-16 | 53 |
common lymphoid progenitor | 5.64e-16 | 53 |
lymphoid lineage restricted progenitor cell | 1.05e-13 | 52 |
mature alpha-beta T cell | 8.88e-13 | 18 |
alpha-beta T cell | 8.88e-13 | 18 |
immature T cell | 8.88e-13 | 18 |
mature T cell | 8.88e-13 | 18 |
immature alpha-beta T cell | 8.88e-13 | 18 |
epithelial cell of uterus | 1.43e-10 | 6 |
stromal cell of endometrium | 1.43e-10 | 6 |
CD8-positive, alpha-beta T cell | 6.96e-10 | 11 |
T cell | 4.68e-09 | 25 |
pro-T cell | 4.68e-09 | 25 |
nongranular leukocyte | 1.22e-08 | 115 |
mucus secreting cell | 2.90e-08 | 1 |
innate effector T cell | 5.05e-08 | 1 |
immature NK T cell | 5.05e-08 | 1 |
effector T cell | 5.05e-08 | 1 |
mature NK T cell | 5.05e-08 | 1 |
immature NK T cell stage IV | 5.05e-08 | 1 |
immature NK T cell stage I | 5.05e-08 | 1 |
immature NK T cell stage II | 5.05e-08 | 1 |
immature NK T cell stage III | 5.05e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 5.83e-07 | 120 |
leukocyte | 6.52e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.43e-10 | 6 |
organ system benign neoplasm | 1.91e-08 | 1 |
skin benign neoplasm | 1.91e-08 | 1 |
integumentary system benign neoplasm | 1.91e-08 | 1 |
dermis tumor | 1.91e-08 | 1 |
cutaneous fibrous histiocytoma | 1.91e-08 | 1 |
mucinous adenocarcinoma | 2.90e-08 | 1 |
acute leukemia | 1.06e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.