FFCP PHASE1:Hg19::chr10:63999898..63999909,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000791!2.81e-33!18;CL:0000789!2.81e-33!18;CL:0002420!2.81e-33!18;CL:0002419!2.81e-33!18;CL:0000790!2.81e-33!18;CL:0000084!7.86e-29!25;CL:0000827!7.86e-29!25;CL:0000625!1.83e-21!11;CL:0000838!1.31e-17!52;CL:0000542!3.70e-17!53;CL:0000051!3.70e-17!53;CL:0000624!8.52e-16!6;CL:0002087!2.49e-10!119;CL:0000738!4.58e-10!140;CL:0000898!6.55e-09!3;CL:0000623!6.75e-08!3;CL:0000825!6.75e-08!3;CL:0000842!1.28e-07!3;CL:0002031!2.84e-07!124;CL:0000037!9.44e-07!172;CL:0000566!9.44e-07!172 | |ontology_enrichment_celltype=CL:0000791!2.81e-33!18;CL:0000789!2.81e-33!18;CL:0002420!2.81e-33!18;CL:0002419!2.81e-33!18;CL:0000790!2.81e-33!18;CL:0000084!7.86e-29!25;CL:0000827!7.86e-29!25;CL:0000625!1.83e-21!11;CL:0000838!1.31e-17!52;CL:0000542!3.70e-17!53;CL:0000051!3.70e-17!53;CL:0000624!8.52e-16!6;CL:0002087!2.49e-10!119;CL:0000738!4.58e-10!140;CL:0000898!6.55e-09!3;CL:0000623!6.75e-08!3;CL:0000825!6.75e-08!3;CL:0000842!1.28e-07!3;CL:0002031!2.84e-07!124;CL:0000037!9.44e-07!172;CL:0000566!9.44e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.56e-43;18!CL:0000789;6.56e-43;18!CL:0002419;6.56e-43;18!CL:0000084;2.33e-30;25!CL:0000624;6.77e-28;6!CL:0000625;2.17e-21;11!CL:0000898;4.58e-21;3!CL:0000815;5.23e-15;2!CL:0000792;5.23e-15;2!CL:0002677;5.23e-15;2!CL:0000542;1.08e-08;53!CL:0000895;8.40e-08;1 | |ontology_enrichment_celltype_v019=CL:0000791;6.56e-43;18!CL:0000789;6.56e-43;18!CL:0002419;6.56e-43;18!CL:0000084;2.33e-30;25!CL:0000624;6.77e-28;6!CL:0000625;2.17e-21;11!CL:0000898;4.58e-21;3!CL:0000815;5.23e-15;2!CL:0000792;5.23e-15;2!CL:0002677;5.23e-15;2!CL:0000542;1.08e-08;53!CL:0000895;8.40e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.72e-43,18;CL:0000789,6.72e-43,18;CL:0002420,6.72e-43,18;CL:0002419,6.72e-43,18;CL:0000790,6.72e-43,18;CL:0000084,2.36e-30,25;CL:0000827,2.36e-30,25;CL:0000624,6.41e-28,6;CL:0000625,2.30e-21,11;CL:0000898,5.81e-21,3;CL:0000815,5.24e-15,2;CL:0000792,5.24e-15,2;CL:0002677,5.24e-15,2;CL:0000838,1.41e-13,52;CL:0000542,2.77e-13,53;CL:0000051,2.77e-13,53;CL:0000810,1.06e-07,1;CL:0000895,1.06e-07,1;CL:0002436,1.06e-07,1;CL:0002427,1.06e-07,1;CL:0002428,1.06e-07,1;CL:0002429,1.06e-07,1;CL:0002433,1.06e-07,1;CL:0002431,1.06e-07,1;CL:0002432,1.06e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;6.56e-43;18!CL:0000051;1.08e-08;53!CL:0002427;8.40e-08;1 | |ontology_enrichment_development_v019=CL:0000790;6.56e-43;18!CL:0000051;1.08e-08;53!CL:0002427;8.40e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.66e-15!15;UBERON:0000179!8.66e-15!15;UBERON:0000463!8.66e-15!15;UBERON:0004177!9.70e-09!7 | |ontology_enrichment_uberon=UBERON:0000178!8.66e-15!15;UBERON:0000179!8.66e-15!15;UBERON:0000463!8.66e-15!15;UBERON:0004177!9.70e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.80e-15;15!UBERON:0000179;3.80e-15;15!UBERON:0000463;3.80e-15;15!UBERON:0002390;2.54e-08;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.80e-15;15!UBERON:0000179;3.80e-15;15!UBERON:0000463;3.80e-15;15!UBERON:0002390;2.54e-08;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.57e-15,15;UBERON:0000179,3.57e-15,15;UBERON:0000463,3.57e-15,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,2.75393678159366,0.786021525498329,1.85041349099558,26.0810932809458,4.88883399950386,10.8892995318989,1.94826728407911,8.80142609392871,22.6846548755625,22.5964572475294,28.7052095590917,2.81800903396485,5.33243324995501,0.493313713811028,0.552700035571697,0.579606171470105,0.444859689486181,0.267540828089713,0,2.15287751125376,1.14966148080576,2.74901956386104,1.26509846009751,1.59282707162048,2.60433381542567,1.90090408889675,0.903450714466637,0.76791966692651,4.99722906209383,2.13099526839615,2.46338399076314,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.86091223510599,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,1.90585420366231,1.64544909234478,0,2.70015718619057,0.79312517629427,0,0,0,0,0,0.213425530045242,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.03382309777839,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.645889098360061,0.869046000142011,0,0.0636471582781649,0,0,0,0.5388164241167,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:63999898..63999909,- | |short_description=p@chr10:63999898..63999909,- | ||
}} | }} |
Revision as of 16:36, 19 November 2012
Short description: | p@chr10:63999898..63999909, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:63999898..63999909, - |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.72e-43 | 18 |
alpha-beta T cell | 6.72e-43 | 18 |
immature T cell | 6.72e-43 | 18 |
mature T cell | 6.72e-43 | 18 |
immature alpha-beta T cell | 6.72e-43 | 18 |
T cell | 2.36e-30 | 25 |
pro-T cell | 2.36e-30 | 25 |
CD4-positive, alpha-beta T cell | 6.41e-28 | 6 |
CD8-positive, alpha-beta T cell | 2.30e-21 | 11 |
naive T cell | 5.81e-21 | 3 |
regulatory T cell | 5.24e-15 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.24e-15 | 2 |
naive regulatory T cell | 5.24e-15 | 2 |
lymphoid lineage restricted progenitor cell | 1.41e-13 | 52 |
lymphocyte | 2.77e-13 | 53 |
common lymphoid progenitor | 2.77e-13 | 53 |
CD4-positive, alpha-beta thymocyte | 1.06e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.06e-07 | 1 |
mature CD4 single-positive thymocyte | 1.06e-07 | 1 |
resting double-positive thymocyte | 1.06e-07 | 1 |
double-positive blast | 1.06e-07 | 1 |
CD69-positive double-positive thymocyte | 1.06e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.06e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.06e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 3.57e-15 | 15 |
haemolymphatic fluid | 3.57e-15 | 15 |
organism substance | 3.57e-15 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.