FFCP PHASE1:Hg19::chr12:50479101..50479108,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002319!8.59e-10!25;CL:0000133!9.91e-09!59;CL:0000221!7.77e-07!71;CL:0000066!8.21e-07!254 | |ontology_enrichment_celltype=CL:0002319!8.59e-10!25;CL:0000133!9.91e-09!59;CL:0000221!7.77e-07!71;CL:0000066!8.21e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.31e-11;25!CL:0002322;8.32e-07;5!CL:0000095;9.20e-07;17 | |ontology_enrichment_celltype_v019=CL:0002319;2.31e-11;25!CL:0002322;8.32e-07;5!CL:0000095;9.20e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,2.73e-12,59;CL:0002319,6.95e-12,25;CL:0000221,9.42e-10,72;CL:0000333,8.61e-09,41;CL:0000095,2.53e-07,17;CL:0000123,2.53e-07,17;CL:0002322,9.56e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000133;7.85e-07;59 | |ontology_enrichment_development_v019=CL:0000133;7.85e-07;59 | ||
|ontology_enrichment_disease=DOID:162!1.88e-15!235;DOID:14566!2.21e-15!239;DOID:0050687!4.52e-13!143;DOID:305!2.92e-08!106;DOID:3095!9.39e-08!22;DOID:2994!9.39e-08!22;DOID:0050686!5.59e-07!137 | |ontology_enrichment_disease=DOID:162!1.88e-15!235;DOID:14566!2.21e-15!239;DOID:0050687!4.52e-13!143;DOID:305!2.92e-08!106;DOID:3095!9.39e-08!22;DOID:2994!9.39e-08!22;DOID:0050686!5.59e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.00e-08;22!DOID:2994;4.00e-08;22 | |ontology_enrichment_disease_v019=DOID:3095;4.00e-08;22!DOID:2994;4.00e-08;22 | ||
|ontology_enrichment_disease_v019_2=DOID:14566,2.84e-11,239;DOID:162,4.11e-11,235;DOID:0050687,1.26e-09,143;DOID:3095,1.47e-08,22;DOID:2994,1.47e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.20e-07!94;UBERON:0001016!7.20e-07!94 | |ontology_enrichment_uberon=UBERON:0000073!7.20e-07!94;UBERON:0001016!7.20e-07!94 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@SMARCD1 | |short_description=p3@SMARCD1 | ||
}} | }} |
Revision as of 05:34, 21 November 2012
Short description: | p3@SMARCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SMARCD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000551966_5end |
EntrezGene: | SMARCD1 |
HGNC: | 11106 |
UniProt: | F8VZ70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 2.73e-12 | 59 |
neural cell | 6.95e-12 | 25 |
ectodermal cell | 9.42e-10 | 72 |
migratory neural crest cell | 8.61e-09 | 41 |
neuron associated cell | 2.53e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.53e-07 | 17 |
embryonic stem cell | 9.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.84e-11 | 239 |
cancer | 4.11e-11 | 235 |
cell type cancer | 1.26e-09 | 143 |
germ cell and embryonal cancer | 1.47e-08 | 22 |
germ cell cancer | 1.47e-08 | 22 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.