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MCL coexpression mm9:62: Difference between revisions

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|ontology_enrichment_uberon=UBERON:0002107!2.01e-38!22;UBERON:0007499!2.01e-38!22;UBERON:0006925!2.01e-38!22;UBERON:0009497!2.01e-38!22;UBERON:0000015!2.01e-38!22;UBERON:0002423!2.01e-38!22;UBERON:0006235!2.01e-38!22;UBERON:0008835!2.01e-38!22;UBERON:0003894!2.01e-38!22;UBERON:0004161!2.01e-38!22;UBERON:0008836!2.01e-38!22;UBERON:0009854!1.17e-36!23;UBERON:0009856!1.17e-36!23;UBERON:0002365!1.48e-33!25;UBERON:0002330!1.48e-33!25;UBERON:0005172!4.15e-21!49;UBERON:0005173!4.15e-21!49;UBERON:0002417!4.15e-21!49;UBERON:0000916!4.15e-21!49;UBERON:0005256!2.33e-20!45;UBERON:0003914!8.27e-17!47;UBERON:0003104!1.85e-16!61;UBERON:0009142!1.85e-16!61;UBERON:0009569!5.09e-15!66;UBERON:0002368!1.15e-14!60;UBERON:0003929!4.96e-14!55;UBERON:0002530!2.39e-13!65;UBERON:0005177!4.02e-12!79;UBERON:0000949!8.25e-12!72;UBERON:0000490!2.64e-11!66;UBERON:0005911!1.03e-10!69;UBERON:0001041!2.31e-10!80;UBERON:0002100!2.55e-10!90;UBERON:0000466!4.67e-09!79
|ontology_enrichment_uberon=UBERON:0002107!2.01e-38!22;UBERON:0007499!2.01e-38!22;UBERON:0006925!2.01e-38!22;UBERON:0009497!2.01e-38!22;UBERON:0000015!2.01e-38!22;UBERON:0002423!2.01e-38!22;UBERON:0006235!2.01e-38!22;UBERON:0008835!2.01e-38!22;UBERON:0003894!2.01e-38!22;UBERON:0004161!2.01e-38!22;UBERON:0008836!2.01e-38!22;UBERON:0009854!1.17e-36!23;UBERON:0009856!1.17e-36!23;UBERON:0002365!1.48e-33!25;UBERON:0002330!1.48e-33!25;UBERON:0005172!4.15e-21!49;UBERON:0005173!4.15e-21!49;UBERON:0002417!4.15e-21!49;UBERON:0000916!4.15e-21!49;UBERON:0005256!2.33e-20!45;UBERON:0003914!8.27e-17!47;UBERON:0003104!1.85e-16!61;UBERON:0009142!1.85e-16!61;UBERON:0009569!5.09e-15!66;UBERON:0002368!1.15e-14!60;UBERON:0003929!4.96e-14!55;UBERON:0002530!2.39e-13!65;UBERON:0005177!4.02e-12!79;UBERON:0000949!8.25e-12!72;UBERON:0000490!2.64e-11!66;UBERON:0005911!1.03e-10!69;UBERON:0001041!2.31e-10!80;UBERON:0002100!2.55e-10!90;UBERON:0000466!4.67e-09!79
|tfbs_overrepresentation_for_novel_motifs=0.0372235,0.0636975,0.0378584,1.61378,2.27444,0.324334,0.202094,1.10583,0.260741,0.000194611,0.0374928,0.381849,0.0337094,0.229902,1.18598,0,0.0897166,1.33752,0.330173,0.0531502,1.62767,0.448242,0.0433794,0.689711,0.666439,0.0117141,1.4976,0.205646,0.00634083,0.432088,0.0668039,0.816162,0.0758815,0.234338,0.00101247,0.00869452,4.20233e-08,0.169661,0.86763,0.000168665,1.22852,0.267123,2.59699,1.57437,0.0618081,0.0378516,0.584034,0.104327,1.7841,0.333529,0.154591,0.157398,0.419652,0.0898082,0.464551,0.157836,1.18923,0.0920787,0.376658,0.0902687,0.171759,0.0204548,0.591383,0.140413,0.026216,0.195213,0.0549724,0.620551,0.166158,0.420657,9.72339e-05,0.613879,1.84023e-11,0.121435,1.13595e-06,0.0677815,0.285568,0.244669,0.680603,1.28172,0.305343,0.104593,0.756707,0.0541539,0.057821,1.42894e-12,0.0862882,0.136423,0.169136,0.325989,0.269071,0.059984,0.100104,0.641692,4.20293e-05,0.4309,0.0623411,0.102215,0.0391772,0.00657043,0.05927,0.19662,0.017731,0.425696,0.615299,0.00323485,0.0168767,0.0567638,0.0579044,0.00389598,0.479489,0.206842,0.243447,0.0758618,0.980952,0.355738,1.23126e-07,0.0126528,0.090782,0.256964,0.29743,0.0548945,1.0029,0.37369,0.335375,1.62539,1.00504,0.0951197,0.200748,0.453762,0.606434,0.114633,0.175365,0.182735,0.62202,0.0327823,0.569173,0.813819,0.530804,0.623436,0.303268,0.206323,0.854434,0.591114,0.0712151,0.0730282,1.32364,0.588986,0.456284,0.0102329,0.0375136,4.24304e-15,0.226936,0.0605612,1.17444,0.0363525,0.381691,0.240876,1.33635,0.0117775,0.931484,0.311017,0.289077,0.0534606,0.141664,0.0988077,0.620468,0.513599,6.5837e-06
|tfbs_overrepresentation_for_novel_motifs=0.0372235,0.0636975,0.0378584,1.61378,2.27444,0.324334,0.202094,1.10583,0.260741,0.000194611,0.0374928,0.381849,0.0337094,0.229902,1.18598,0,0.0897166,1.33752,0.330173,0.0531502,1.62767,0.448242,0.0433794,0.689711,0.666439,0.0117141,1.4976,0.205646,0.00634083,0.432088,0.0668039,0.816162,0.0758815,0.234338,0.00101247,0.00869452,4.20233e-08,0.169661,0.86763,0.000168665,1.22852,0.267123,2.59699,1.57437,0.0618081,0.0378516,0.584034,0.104327,1.7841,0.333529,0.154591,0.157398,0.419652,0.0898082,0.464551,0.157836,1.18923,0.0920787,0.376658,0.0902687,0.171759,0.0204548,0.591383,0.140413,0.026216,0.195213,0.0549724,0.620551,0.166158,0.420657,9.72339e-05,0.613879,1.84023e-11,0.121435,1.13595e-06,0.0677815,0.285568,0.244669,0.680603,1.28172,0.305343,0.104593,0.756707,0.0541539,0.057821,1.42894e-12,0.0862882,0.136423,0.169136,0.325989,0.269071,0.059984,0.100104,0.641692,4.20293e-05,0.4309,0.0623411,0.102215,0.0391772,0.00657043,0.05927,0.19662,0.017731,0.425696,0.615299,0.00323485,0.0168767,0.0567638,0.0579044,0.00389598,0.479489,0.206842,0.243447,0.0758618,0.980952,0.355738,1.23126e-07,0.0126528,0.090782,0.256964,0.29743,0.0548945,1.0029,0.37369,0.335375,1.62539,1.00504,0.0951197,0.200748,0.453762,0.606434,0.114633,0.175365,0.182735,0.62202,0.0327823,0.569173,0.813819,0.530804,0.623436,0.303268,0.206323,0.854434,0.591114,0.0712151,0.0730282,1.32364,0.588986,0.456284,0.0102329,0.0375136,4.24304e-15,0.226936,0.0605612,1.17444,0.0363525,0.381691,0.240876,1.33635,0.0117775,0.931484,0.311017,0.289077,0.0534606,0.141664,0.0988077,0.620468,0.513599,6.5837e-06
|tfbs_overrepresentation_jaspar=MA0003.1;1.41274e-14,MA0004.1;0.972881,MA0006.1;0.00406052,MA0007.1;1.45103,MA0009.1;0.110615,MA0014.1;8.19678e-16,MA0017.1;6.05429,MA0019.1;0.201586,MA0024.1;0.175042,MA0025.1;0.171653,MA0027.1;1.08439,MA0028.1;0.0112726,MA0029.1;0.674103,MA0030.1;0.470454,MA0031.1;0.576564,MA0038.1;0.0637759,MA0040.1;0.437871,MA0041.1;1.19812,MA0042.1;2.11213,MA0043.1;0.394257,MA0046.1;0.288016,MA0048.1;0.00712941,MA0050.1;0.215336,MA0051.1;0.130122,MA0052.1;0.127693,MA0055.1;0.0532228,MA0056.1;0,MA0057.1;0.00035557,MA0058.1;0.685706,MA0059.1;0.115204,MA0060.1;0.000440768,MA0061.1;0.103799,MA0063.1;0,MA0066.1;1.14975,MA0067.1;0.0803116,MA0068.1;0.0142405,MA0069.1;1.00365,MA0070.1;0.674015,MA0071.1;2.07657,MA0072.1;0.237246,MA0073.1;5.42885e-06,MA0074.1;0.903279,MA0076.1;0.000800352,MA0077.1;0.0961978,MA0078.1;0.289376,MA0081.1;0.115458,MA0083.1;0.017477,MA0084.1;0.251332,MA0087.1;0.315858,MA0088.1;0.00668219,MA0089.1;0,MA0090.1;0.247189,MA0091.1;0.228656,MA0092.1;0.338253,MA0093.1;0.889321,MA0095.1;0,MA0098.1;0,MA0100.1;0.0998872,MA0101.1;0.13466,MA0103.1;1.27181,MA0105.1;0.019692,MA0106.1;0.0246319,MA0107.1;0.056837,MA0108.2;0.242268,MA0109.1;0,MA0111.1;0.990752,MA0113.1;0.24114,MA0114.1;3.41648,MA0115.1;3.29831,MA0116.1;0.00402935,MA0117.1;0.171901,MA0119.1;0.194546,MA0122.1;0.19298,MA0124.1;0.483445,MA0125.1;0.650526,MA0130.1;0,MA0131.1;0.106217,MA0132.1;0,MA0133.1;0,MA0135.1;0.465662,MA0136.1;0.231089,MA0139.1;0.0418203,MA0140.1;0.0115191,MA0141.1;4.21557,MA0142.1;0.755425,MA0143.1;0.5773,MA0144.1;0.105831,MA0145.1;0.0136662,MA0146.1;8.35903e-06,MA0147.1;0.00181853,MA0148.1;1.32406,MA0149.1;5.40129,MA0062.2;2.47077e-06,MA0035.2;0.0125506,MA0039.2;0,MA0138.2;0.0982529,MA0002.2;0.200091,MA0137.2;0.191357,MA0104.2;0.000186929,MA0047.2;1.7766,MA0112.2;0.400673,MA0065.2;1.73754,MA0150.1;0.0626153,MA0151.1;0,MA0152.1;0.428907,MA0153.1;0.110679,MA0154.1;0.428286,MA0155.1;0.437069,MA0156.1;0.0302647,MA0157.1;0.435247,MA0158.1;0,MA0159.1;0.301585,MA0160.1;2.71636,MA0161.1;0,MA0162.1;3.15258e-12,MA0163.1;5.1581e-06,MA0164.1;1.2763,MA0080.2;0.177328,MA0018.2;0.0025392,MA0099.2;0.282979,MA0079.2;0,MA0102.2;0.78125,MA0258.1;0.27704,MA0259.1;0.00822134,MA0442.1;0
}}
}}

Revision as of 11:06, 23 January 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:105010330..105010333,+p@chr10:105010330..105010333
+
Mm9::chr10:120832307..120832329,+p@chr10:120832307..120832329
+
Mm9::chr10:24640563..24640582,-p@chr10:24640563..24640582
-
Mm9::chr10:76046620..76046627,+p@chr10:76046620..76046627
+
Mm9::chr10:76046637..76046645,+p@chr10:76046637..76046645
+
Mm9::chr10:76551658..76551696,-p@chr10:76551658..76551696
-
Mm9::chr10:80420574..80420593,-p@chr10:80420574..80420593
-
Mm9::chr10:94030873..94030889,+p@chr10:94030873..94030889
+
Mm9::chr11:101232027..101232037,+p@chr11:101232027..101232037
+
Mm9::chr11:101235967..101235987,+p@chr11:101235967..101235987
+
Mm9::chr11:101237937..101237944,+p@chr11:101237937..101237944
+
Mm9::chr11:101237948..101237957,+p@chr11:101237948..101237957
+
Mm9::chr11:101237971..101237984,+p@chr11:101237971..101237984
+
Mm9::chr11:109597957..109597959,+p@chr11:109597957..109597959
+
Mm9::chr11:53164494..53164501,+p10@Aff4
Mm9::chr11:7097783..7097798,+p1@Igfbp1
Mm9::chr11:7097855..7097857,+p5@Igfbp1
Mm9::chr11:7099856..7099859,+p@chr11:7099856..7099859
+
Mm9::chr11:7099887..7099897,+p@chr11:7099887..7099897
+
Mm9::chr11:72940256..72940279,+p@chr11:72940256..72940279
+
Mm9::chr11:74475505..74475525,+p@chr11:74475505..74475525
+
Mm9::chr11:74478852..74478867,+p@chr11:74478852..74478867
+
Mm9::chr11:75246030..75246040,-p@chr11:75246030..75246040
-
Mm9::chr11:75250303..75250319,-p@chr11:75250303..75250319
-
Mm9::chr11:98313147..98313153,+p7@Grb7
Mm9::chr12:105185322..105185351,-p@chr12:105185322..105185351
-
Mm9::chr12:105186369..105186379,-p@chr12:105186369..105186379
-
Mm9::chr12:105189503..105189517,-p@chr12:105189503..105189517
-
Mm9::chr12:105189596..105189622,-p@chr12:105189596..105189622
-
Mm9::chr12:105651813..105651826,+p@chr12:105651813..105651826
+
Mm9::chr12:105652290..105652311,+p@chr12:105652290..105652311
+
Mm9::chr12:110091687..110091718,+p@chr12:110091687..110091718
+
Mm9::chr12:113872170..113872203,+p@chr12:113872170..113872203
+
Mm9::chr12:16544598..16544616,-p@chr12:16544598..16544616
-
Mm9::chr12:16584034..16584047,-p@chr12:16584034..16584047
-
Mm9::chr13:115644327..115644334,-p@chr13:115644327..115644334
-
Mm9::chr13:115644341..115644353,-p@chr13:115644341..115644353
-
Mm9::chr13:30473208..30473233,+p@chr13:30473208..30473233
+
Mm9::chr13:36050719..36050731,+p2@Ppp1r3g
Mm9::chr13:36050741..36050755,+p3@Ppp1r3g
Mm9::chr13:36054996..36055000,+p@chr13:36054996..36055000
+
Mm9::chr13:36055439..36055444,+p@chr13:36055439..36055444
+
Mm9::chr13:36060336..36060340,+p@chr13:36060336..36060340
+
Mm9::chr13:41279802..41279815,-p@chr13:41279802..41279815
-
Mm9::chr13:41290179..41290190,-p@chr13:41290179..41290190
-
Mm9::chr13:60830741..60830746,+p@chr13:60830741..60830746
+
Mm9::chr13:64470127..64470139,-p@chr13:64470127..64470139
-
Mm9::chr13:69208816..69208840,-p@chr13:69208816..69208840
-
Mm9::chr13:69756304..69756323,+p@chr13:69756304..69756323
+
Mm9::chr14:31703347..31703355,+p@chr14:31703347..31703355
+
Mm9::chr14:31728902..31728922,-p3@Itih3
Mm9::chr14:31734925..31734949,-p@chr14:31734925..31734949
-
Mm9::chr14:31735163..31735178,-p@chr14:31735163..31735178
-
Mm9::chr14:32453733..32453761,-p@chr14:32453733..32453761
-
Mm9::chr14:41927544..41927549,+p@chr14:41927544..41927549
+
Mm9::chr14:41928437..41928446,+p@chr14:41928437..41928446
+
Mm9::chr14:41928528..41928559,+p@chr14:41928528..41928559
+
Mm9::chr14:41935994..41936028,+p@chr14:41935994..41936028
+
Mm9::chr14:41936181..41936204,+p@chr14:41936181..41936204
+
Mm9::chr14:41936834..41936851,+p@chr14:41936834..41936851
+
Mm9::chr14:59996459..59996463,-p@chr14:59996459..59996463
-
Mm9::chr14:60026594..60026599,-p@chr14:60026594..60026599
-
Mm9::chr14:60030992..60031011,-p@chr14:60030992..60031011
-
Mm9::chr14:60037906..60037936,-p@chr14:60037906..60037936
-
Mm9::chr14:60059616..60059724,-p1@Setdb2
Mm9::chr14:60059925..60059934,-p3@Setdb2
Mm9::chr14:60059940..60059945,-p6@Setdb2
Mm9::chr14:60060139..60060144,-p7@Setdb2
Mm9::chr14:60060146..60060147,-p10@Setdb2
Mm9::chr14:60060148..60060154,-p5@Setdb2
Mm9::chr14:60171358..60171367,-p@chr14:60171358..60171367
-
Mm9::chr14:65918185..65918223,-p@chr14:65918185..65918223
-
Mm9::chr14:66728986..66729012,-p@chr14:66728986..66729012
-
Mm9::chr14:69866953..69866998,-p@chr14:69866953..69866998
-
Mm9::chr15:82623000..82623010,-p@chr15:82623000..82623010
-
Mm9::chr15:85617599..85617607,+p@chr15:85617599..85617607
+
Mm9::chr16:13672712..13672721,-p@chr16:13672712..13672721
-
Mm9::chr16:17336638..17336647,+p@chr16:17336638..17336647
+
Mm9::chr16:20107610..20107633,+p@chr16:20107610..20107633
+
Mm9::chr16:21762259..21762278,-p@chr16:21762259..21762278
-
Mm9::chr16:21762652..21762659,-p@chr16:21762652..21762659
-
Mm9::chr16:21762679..21762686,-p@chr16:21762679..21762686
-
Mm9::chr16:21762968..21762978,-p@chr16:21762968..21762978
-
Mm9::chr16:21762980..21762984,-p@chr16:21762980..21762984
-
Mm9::chr16:21763054..21763088,-p@chr16:21763054..21763088
-
Mm9::chr16:21766620..21766647,-p@chr16:21766620..21766647
-
Mm9::chr16:21775562..21775568,-p@chr16:21775562..21775568
-
Mm9::chr16:21780395..21780399,-p@chr16:21780395..21780399
-
Mm9::chr16:22896495..22896505,+p@chr16:22896495..22896505
+
Mm9::chr16:22898238..22898254,+p@chr16:22898238..22898254
+
Mm9::chr16:22898855..22898877,+p@chr16:22898855..22898877
+
Mm9::chr16:22899088..22899115,+p@chr16:22899088..22899115
+
Mm9::chr16:22961312..22961320,+p@chr16:22961312..22961320
+
Mm9::chr16:23067759..23067783,+p@chr16:23067759..23067783
+
Mm9::chr16:5009251..5009290,-p@chr16:5009251..5009290
-
Mm9::chr17:10402287..10402298,-p@chr17:10402287..10402298
-
Mm9::chr17:24562436..24562471,+p@chr17:24562436..24562471
+
Mm9::chr17:26219024..26219043,-p@chr17:26219024..26219043
-
Mm9::chr17:31985777..31985792,-p@chr17:31985777..31985792
-
Mm9::chr17:34998113..34998124,-p@chr17:34998113..34998124
-
Mm9::chr17:34998766..34998782,-p@chr17:34998766..34998782
-
Mm9::chr17:74179994..74180035,+p@chr17:74179994..74180035
+
Mm9::chr18:36688859..36688862,+p4@Slc4a9
Mm9::chr18:36688877..36688895,+p2@Slc4a9
Mm9::chr18:36688897..36688905,+p3@Slc4a9
Mm9::chr18:61276937..61276946,+p@chr18:61276937..61276946
+
Mm9::chr18:78017494..78017536,+p2@Atp5a1
Mm9::chr18:78018585..78018636,+p3@Atp5a1
Mm9::chr19:32712104..32712150,+p@chr19:32712104..32712150
+
Mm9::chr19:3352500..3352516,+p@chr19:3352500..3352516
+
Mm9::chr19:43574773..43574782,-p@chr19:43574773..43574782
-
Mm9::chr19:43574969..43574980,-p@chr19:43574969..43574980
-
Mm9::chr19:43579074..43579085,-p5@Got1
Mm9::chr19:43581489..43581519,-p@chr19:43581489..43581519
-
Mm9::chr19:43584696..43584708,-p@chr19:43584696..43584708
-
Mm9::chr19:43595849..43595854,-p@chr19:43595849..43595854
-
Mm9::chr19:43598859..43598863,-p4@Got1
Mm9::chr19:43599246..43599251,-p2@Got1
Mm9::chr19:4603126..4603145,+p@chr19:4603126..4603145
+
Mm9::chr19:4604533..4604541,+p@chr19:4604533..4604541
+
Mm9::chr19:4609920..4609940,+p@chr19:4609920..4609940
+
Mm9::chr19:46728493..46728517,+p@chr19:46728493..46728517
+
Mm9::chr19:46728595..46728624,+p@chr19:46728595..46728624
+
Mm9::chr19:46728861..46728908,+p@chr19:46728861..46728908
+
Mm9::chr19:46729311..46729333,+p@chr19:46729311..46729333
+
Mm9::chr19:46729419..46729449,+p@chr19:46729419..46729449
+
Mm9::chr19:55170214..55170254,-p@chr19:55170214..55170254
-
Mm9::chr19:55171231..55171244,-p@chr19:55171231..55171244
-
Mm9::chr19:55171374..55171378,-p@chr19:55171374..55171378
-
Mm9::chr1:132629195..132629199,-p@chr1:132629195..132629199
-
Mm9::chr1:174824711..174824728,-p@chr1:174824711..174824728
-
Mm9::chr1:174824729..174824734,-p@chr1:174824729..174824734
-
Mm9::chr1:183141303..183141327,-p@chr1:183141303..183141327
-
Mm9::chr1:186634859..186634870,-p@chr1:186634859..186634870
-
Mm9::chr1:67212018..67212067,+p@chr1:67212018..67212067
+
Mm9::chr1:71672804..71672825,-p@chr1:71672804..71672825
-
Mm9::chr1:71678650..71678669,-p@chr1:71678650..71678669
-
Mm9::chr1:71697164..71697190,-p@chr1:71697164..71697190
-
Mm9::chr1:72898878..72898890,+p@chr1:72898878..72898890
+
Mm9::chr1:87949618..87949647,+p@chr1:87949618..87949647
+
Mm9::chr1:87950440..87950454,+p@chr1:87950440..87950454
+
Mm9::chr2:10024442..10024449,-p@chr2:10024442..10024449
-
Mm9::chr2:127995486..127995495,+p@chr2:127995486..127995495
+
Mm9::chr2:158150323..158150330,+p@chr2:158150323..158150330
+
Mm9::chr2:24588721..24588729,-p@chr2:24588721..24588729
-
Mm9::chr2:28325355..28325373,+p@chr2:28325355..28325373
+
Mm9::chr2:79209015..79209025,-p@chr2:79209015..79209025
-
Mm9::chr3:116237676..116237690,+p@chr3:116237676..116237690
+
Mm9::chr3:121517712..121517734,-p8@Abcd3
Mm9::chr3:67386800..67386820,+p@chr3:67386800..67386820
+
Mm9::chr3:79432558..79432569,-p4@Etfdh
Mm9::chr3:82834969..82834976,+p@chr3:82834969..82834976
+
Mm9::chr3:82850608..82850636,-p@chr3:82850608..82850636
-
Mm9::chr3:96360173..96360180,-p@chr3:96360173..96360180
-
Mm9::chr3:96363037..96363067,+p2@Txnip
Mm9::chr3:96364220..96364241,+p4@Txnip
Mm9::chr3:98085398..98085415,+p@chr3:98085398..98085415
+
Mm9::chr3:98090930..98090931,+p@chr3:98090930..98090931
+
Mm9::chr3:98094814..98094830,+p@chr3:98094814..98094830
+
Mm9::chr3:98103129..98103149,+p@chr3:98103129..98103149
+
Mm9::chr3:98106532..98106560,+p@chr3:98106532..98106560
+
Mm9::chr3:98112946..98112965,+p@chr3:98112946..98112965
+
Mm9::chr3:98113011..98113022,+p@chr3:98113011..98113022
+
Mm9::chr3:98113078..98113092,+p@chr3:98113078..98113092
+
Mm9::chr4:115159495..115159507,-p@chr4:115159495..115159507
-
Mm9::chr4:115164719..115164732,-p@chr4:115164719..115164732
-
Mm9::chr4:129164331..129164342,+p@chr4:129164331..129164342
+
Mm9::chr4:129164402..129164416,+p@chr4:129164402..129164416
+
Mm9::chr4:138946746..138946765,+p@chr4:138946746..138946765
+
Mm9::chr4:141264317..141264329,-p@chr4:141264317..141264329
-
Mm9::chr4:70214726..70214768,+p@chr4:70214726..70214768
+
Mm9::chr4:70243450..70243457,+p@chr4:70243450..70243457
+
Mm9::chr4:71859342..71859353,-p@chr4:71859342..71859353
-
Mm9::chr4:86303273..86303291,-p@chr4:86303273..86303291
-
Mm9::chr5:120969718..120969761,+p@chr5:120969718..120969761
+
Mm9::chr5:123689685..123689727,+p@chr5:123689685..123689727
+
Mm9::chr5:136173121..136173124,+p@chr5:136173121..136173124
+
Mm9::chr5:136204526..136204537,+p@chr5:136204526..136204537
+
Mm9::chr5:136209734..136209749,+p@chr5:136209734..136209749
+
Mm9::chr5:136210826..136210846,+p@chr5:136210826..136210846
+
Mm9::chr5:140593994..140594010,-p@chr5:140593994..140594010
-
Mm9::chr5:140594014..140594023,-p@chr5:140594014..140594023
-
Mm9::chr5:20392008..20392016,+p@chr5:20392008..20392016
+
Mm9::chr5:35387912..35387920,+p@chr5:35387912..35387920
+
Mm9::chr5:35387924..35387934,+p@chr5:35387924..35387934
+
Mm9::chr5:51431337..51431344,+p@chr5:51431337..51431344
+
Mm9::chr6:116600743..116600747,+p5@8430408G22Rik
Mm9::chr6:116601797..116601814,+p@chr6:116601797..116601814
+
Mm9::chr6:116601894..116601903,+p@chr6:116601894..116601903
+
Mm9::chr6:116602248..116602281,+p@chr6:116602248..116602281
+
Mm9::chr6:125540878..125540886,+p@chr6:125540878..125540886
+
Mm9::chr6:136895564..136895569,-p@chr6:136895564..136895569
-
Mm9::chr6:72092166..72092185,+p@chr6:72092166..72092185
+
Mm9::chr6:72306098..72306121,+p@chr6:72306098..72306121
+
Mm9::chr6:72307947..72307960,+p@chr6:72307947..72307960
+
Mm9::chr6:87794011..87794082,-p@chr6:87794011..87794082
-
Mm9::chr7:13615857..13615886,+p4@Trim28
Mm9::chr7:149839571..149839592,-p@chr7:149839571..149839592
-
Mm9::chr7:20263296..20263301,-p4@Apoc2
Mm9::chr7:26030459..26030472,-p@chr7:26030459..26030472
-
Mm9::chr7:36376782..36376790,+p@chr7:36376782..36376790
+
Mm9::chr8:10435789..10435799,+p@chr8:10435789..10435799
+
Mm9::chr8:10865930..10865936,-p@chr8:10865930..10865936
-
Mm9::chr8:10899947..10899956,+p2@uc009kuw.1
p2@uc009kux.1
Mm9::chr8:10902046..10902061,+p@chr8:10902046..10902061
+
Mm9::chr8:112521472..112521476,+p@chr8:112521472..112521476
+
Mm9::chr8:112522903..112522925,+p@chr8:112522903..112522925
+
Mm9::chr8:112523147..112523161,+p@chr8:112523147..112523161
+
Mm9::chr8:127087771..127087805,-p@chr8:127087771..127087805
-
Mm9::chr8:46362390..46362394,-p@chr8:46362390..46362394
-
Mm9::chr8:47604575..47604586,+p@chr8:47604575..47604586
+
Mm9::chr8:47612553..47612599,+p7@Acsl1
Mm9::chr8:47619928..47619954,+p@chr8:47619928..47619954
+
Mm9::chr8:47620318..47620356,+p@chr8:47620318..47620356
+
Mm9::chr8:47620556..47620576,+p@chr8:47620556..47620576
+
Mm9::chr9:103130275..103130312,-p@chr9:103130275..103130312
-
Mm9::chr9:105322776..105322787,-p@chr9:105322776..105322787
-
Mm9::chr9:110246667..110246684,+p9@Scap
Mm9::chr9:110246689..110246708,+p7@Scap
Mm9::chr9:110246713..110246733,+p8@Scap
Mm9::chr9:110246755..110246766,+p15@Scap
Mm9::chr9:36587423..36587435,-p@chr9:36587423..36587435
-
Mm9::chr9:44208606..44208618,+p@chr9:44208606..44208618
+
Mm9::chr9:44210569..44210577,+p@chr9:44210569..44210577
+
Mm9::chr9:46078635..46078656,+p@chr9:46078635..46078656
+
Mm9::chrX:49782013..49782028,-p@chrX:49782013..49782028
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data




Relative expression of the co-expression cluster over median <br>Analyst:





Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>



TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs




JASPAR motifs