NonredundantMotifs:148: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=3661
|motif_cluster_2013_march_motif_members= /UNIPROBE:Irf3_secondary;SCI09
|name=known148
|representative_motif_db=UNIPROBE
|representati...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.236564586712149;0.149020313582308;0.414810647541439;0.199604452164104!2;0.197737296447104;0.139048359082098;0.436763623351043;0.226450721119755!3;0.598309181796851;0.0899627658052024;0.124244651423281;0.187483400974665!4;0.212136229570875;0.0552960410271202;0.648271588921951;0.0842961404800536!5;0.747143687927959;0.0271838395069201;0.0477889113605609;0.17788356120456!6;0.766824536209713;0.0512376003572714;0.039008367029908;0.142929496403107!7;0.479461928468923;0.0857425105575362;0.175517001238708;0.259278559734832!8;0.0646254891266184;0.107366356095086;0.753079212622898;0.0749289421553972!9;0.0580337208128221;0.074096196233567;0.820936527885196;0.0469335550684149!10;0.270071546945207;0.0887137920089251;0.217157700875943;0.424056960169925!11;0.0638672420416772;0.384542549671223;0.418513740997926;0.133076467289173!12;0.0473516117812653;0.597209681925573;0.16777018112198;0.187668525171182!13;0.266737119845261;0.15006346746941;0.382263891459544;0.200935521225784!14;0.381078535635948;0.204426622341778;0.218491540426112;0.196003301596161 | |||
|entrez_gene_id=3661 | |entrez_gene_id=3661 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Irf3_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /UNIPROBE:Irf3_secondary;SCI09 | ||
|name= | |name=non-redundant148 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Irf3_secondary | |representative_motif_id=Irf3_secondary | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant148
- db :UNIPROBE
- Id :Irf3_secondary
- name :SCI09
- score :0.3414365863614239
- External refs:
- Internal refs:
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Sub Motif Members
