FFCP PHASE1:Hg19::chr1:115572444..115572451,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7252 | |EntrezGene=7252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12372 | |HGNC=12372 | ||
|TSSclassifier=N | |||
|UniProt=P01222 | |UniProt=P01222 | ||
|association_with_transcript=29bp_to_ENST00000256592,NM_000549,uc001efs.1_5end | |association_with_transcript=29bp_to_ENST00000256592,NM_000549,uc001efs.1_5end | ||
Revision as of 19:22, 5 July 2013
| Short description: | p1@TSHB |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_TSHB_5end |
| Coexpression cluster: | C155_pituitary_placenta_nonsmall_cervical_smallcell_choriocarcinoma_epitheloid |
| Association with transcript: | 29bp_to_ENST00000256592, NM_000549, uc001efs.1_5end |
| EntrezGene: | TSHB |
| HGNC: | 12372 |
| UniProt: | P01222 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@TSHB |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hair follicle dermal papilla cell | 4.09e-23 | 3 |
| stem cell of epidermis | 4.09e-23 | 3 |
| hair follicle cell | 1.83e-14 | 5 |
| Ontology term | p-value | n |
|---|---|---|
| pituitary gland | 4.61e-131 | 2 |
| gland of diencephalon | 2.40e-66 | 4 |
| neuroendocrine gland | 2.40e-66 | 4 |
| diencephalon | 1.49e-38 | 7 |
| future diencephalon | 1.49e-38 | 7 |
| dermal papilla | 4.09e-23 | 3 |
| papillary layer of dermis | 4.09e-23 | 3 |
| hair follicle | 1.83e-14 | 5 |
| hair follicle placode | 1.83e-14 | 5 |
| endocrine gland | 1.09e-08 | 35 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
