FFCP PHASE1:Hg19::chr2:21225647..21225655,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=S | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=-6bp_to_M36676_5end | |association_with_transcript=-6bp_to_M36676_5end | ||
Revision as of 21:27, 8 July 2013
| Short description: | p47@APOB |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_47_at_APOB_5end |
| Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
| Association with transcript: | -6bp_to_M36676_5end |
| EntrezGene: | APOB |
| HGNC: | 603 |
| UniProt: | P04114 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p47@APOB |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 8.60e-52 | 12 |
| endodermal cell | 5.27e-11 | 58 |
| Ontology term | p-value | n |
|---|---|---|
| liver | 2.16e-63 | 19 |
| digestive gland | 2.16e-63 | 19 |
| liver bud | 2.16e-63 | 19 |
| hepatic diverticulum | 8.41e-55 | 22 |
| liver primordium | 8.41e-55 | 22 |
| digestive tract diverticulum | 1.96e-52 | 23 |
| epithelial sac | 2.87e-48 | 25 |
| epithelium of foregut-midgut junction | 2.87e-48 | 25 |
| anatomical boundary | 2.87e-48 | 25 |
| hepatobiliary system | 2.87e-48 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
