FFCP PHASE1:Hg19::chr10:123748653..123748685,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10579|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11523|TSSclassifier=S|UniProt=O95359|association_with_transcript=-3bp_to_ENST00000492689,NM_206861,NM_206862,uc001lfv.2,uc001lfw.2,uc009xzx.2,uc010qtv.1_5end|coexpression_cluster_id=C34|description=CAGE_peak_8_at_TACC2_5end|id=chr10:123748653..123748685,+|ontology_enrichment_celltype=CL:0002541!2.43e-15!3;CL:0000181!8.55e-14!12;CL:0000417!8.55e-14!12;CL:0000668!8.55e-14!12;CL:0000414!8.55e-14!12;CL:0000412!8.55e-14!12;CL:0000182!8.55e-14!12;CL:0000039!2.19e-11!7;CL:0000586!2.19e-11!7;CL:0000223!3.64e-09!59|ontology_enrichment_celltype_v019=CL:0002541;1.11e-28;3!CL:0000039;3.97e-13;7!CL:0000586;3.97e-13;7!CL:0000182;9.67e-13;12!CL:0000083;1.54e-10;4|ontology_enrichment_celltype_v019_2=CL:0002541,9.20e-29,3;CL:0000039,3.89e-13,7;CL:0000586,3.89e-13,7;CL:0000182,1.04e-12,12;CL:0000083,1.62e-10,4;CL:0000223,2.86e-07,58|ontology_enrichment_development_v019=UBERON:0004161;7.06e-14;11!UBERON:0009497;8.88e-12;13!UBERON:0003124;2.53e-11;1!UBERON:0001041;7.05e-11;30|ontology_enrichment_disease=DOID:305!3.47e-10!106;DOID:0050687!9.78e-10!143;DOID:170!7.86e-08!6|ontology_enrichment_disease_v019=DOID:1799;3.95e-11;1!DOID:10165;3.95e-11;1!DOID:1798;3.95e-11;1!DOID:178;1.46e-10;1!DOID:326;1.46e-10;1!DOID:3978;1.46e-10;1!DOID:3394;1.46e-10;1!DOID:5844;1.46e-10;1!DOID:1793;1.54e-10;4!DOID:170;2.61e-07;6!DOID:7;4.70e-07;39|ontology_enrichment_disease_v019_2=DOID:1799,4.15e-11,1;DOID:10165,4.15e-11,1;DOID:1798,4.15e-11,1;DOID:178,1.21e-10,1;DOID:326,1.21e-10,1;DOID:3978,1.21e-10,1;DOID:3394,1.21e-10,1;DOID:5844,1.21e-10,1;DOID:1793,1.62e-10,4;DOID:7,3.13e-08,39;DOID:170,2.69e-07,6|ontology_enrichment_uberon=UBERON:0000476!2.43e-15!3;UBERON:0000920!2.43e-15!3;UBERON:0004921!2.68e-12!129;UBERON:0004185!2.68e-12!129;UBERON:0003124!1.50e-11!7;UBERON:0000077!4.76e-11!130;UBERON:0001007!1.94e-09!155;UBERON:0001555!1.94e-09!155;UBERON:0007026!1.94e-09!155;UBERON:0004119!2.57e-09!169;UBERON:0000925!2.57e-09!169;UBERON:0006595!2.57e-09!169;UBERON:0001041!9.99e-09!98;UBERON:0005631!1.47e-08!14;UBERON:0000158!1.47e-08!14;UBERON:0002107!1.75e-08!19;UBERON:0006925!1.75e-08!19;UBERON:0008836!1.75e-08!19;UBERON:0007499!2.15e-08!25;UBERON:0001737!3.18e-08!9;UBERON:0009856!4.92e-08!26;UBERON:0008835!3.05e-07!22;UBERON:0003894!3.05e-07!22;UBERON:0000949!4.59e-07!45;UBERON:0005911!5.21e-07!82;UBERON:0009854!6.70e-07!23;UBERON:0003929!6.98e-07!54|ontology_enrichment_uberon_v019=UBERON:0003124;1.11e-28;3!UBERON:0000920;1.11e-28;3!UBERON:0002171;9.50e-11;1!UBERON:0006518;9.50e-11;1!UBERON:0008949;9.50e-11;1!UBERON:0000101;9.50e-11;1!UBERON:0002167;9.50e-11;1!UBERON:0005631;5.03e-09;10!UBERON:0000158;5.03e-09;10!UBERON:0002107;4.06e-08;19!UBERON:0006925;4.06e-08;19|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.20e-29,3;UBERON:0003124,4.96e-22,7;UBERON:0005631,3.85e-11,14;UBERON:0000158,3.85e-11,14;UBERON:0002171,1.10e-10,1;UBERON:0006518,1.10e-10,1;UBERON:0008949,1.10e-10,1;UBERON:0000101,1.10e-10,1;UBERON:0002167,1.10e-10,1;UBERON:0002107,4.26e-08,19;UBERON:0006925,4.26e-08,19;UBERON:0008836,4.26e-08,19;UBERON:0000949,4.10e-07,45;UBERON:0008835,5.17e-07,22;UBERON:0003894,5.17e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,6.88735255841436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.09476419318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.3269054749798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,3.64598865519327,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14748103602986,26.5682627452926,27.487785096268,4.14701507651495,1.92354946143911,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,2.15231080825299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99679000498991,0,0,0,0,2.32991899054908,1.3393140992228,1.07140615895516,0.876246070104404,8.85847333632739,0,0,0,0,0,0,0,0,0,0,0.0788057072991982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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10579 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11523 | |||
|TSSclassifier=S | |||
|UniProt=O95359 | |||
|association_with_transcript=-3bp_to_ENST00000492689,NM_206861,NM_206862,uc001lfv.2,uc001lfw.2,uc009xzx.2,uc010qtv.1_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_8_at_TACC2_5end | |||
|id=chr10:123748653..123748685,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.43e-15!3;CL:0000181!8.55e-14!12;CL:0000417!8.55e-14!12;CL:0000668!8.55e-14!12;CL:0000414!8.55e-14!12;CL:0000412!8.55e-14!12;CL:0000182!8.55e-14!12;CL:0000039!2.19e-11!7;CL:0000586!2.19e-11!7;CL:0000223!3.64e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.11e-28;3!CL:0000039;3.97e-13;7!CL:0000586;3.97e-13;7!CL:0000182;9.67e-13;12!CL:0000083;1.54e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.20e-29,3;CL:0000039,3.89e-13,7;CL:0000586,3.89e-13,7;CL:0000182,1.04e-12,12;CL:0000083,1.62e-10,4;CL:0000223,2.86e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.06e-14;11!UBERON:0009497;8.88e-12;13!UBERON:0003124;2.53e-11;1!UBERON:0001041;7.05e-11;30 | |||
|ontology_enrichment_disease=DOID:305!3.47e-10!106;DOID:0050687!9.78e-10!143;DOID:170!7.86e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.95e-11;1!DOID:10165;3.95e-11;1!DOID:1798;3.95e-11;1!DOID:178;1.46e-10;1!DOID:326;1.46e-10;1!DOID:3978;1.46e-10;1!DOID:3394;1.46e-10;1!DOID:5844;1.46e-10;1!DOID:1793;1.54e-10;4!DOID:170;2.61e-07;6!DOID:7;4.70e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.15e-11,1;DOID:10165,4.15e-11,1;DOID:1798,4.15e-11,1;DOID:178,1.21e-10,1;DOID:326,1.21e-10,1;DOID:3978,1.21e-10,1;DOID:3394,1.21e-10,1;DOID:5844,1.21e-10,1;DOID:1793,1.62e-10,4;DOID:7,3.13e-08,39;DOID:170,2.69e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.43e-15!3;UBERON:0000920!2.43e-15!3;UBERON:0004921!2.68e-12!129;UBERON:0004185!2.68e-12!129;UBERON:0003124!1.50e-11!7;UBERON:0000077!4.76e-11!130;UBERON:0001007!1.94e-09!155;UBERON:0001555!1.94e-09!155;UBERON:0007026!1.94e-09!155;UBERON:0004119!2.57e-09!169;UBERON:0000925!2.57e-09!169;UBERON:0006595!2.57e-09!169;UBERON:0001041!9.99e-09!98;UBERON:0005631!1.47e-08!14;UBERON:0000158!1.47e-08!14;UBERON:0002107!1.75e-08!19;UBERON:0006925!1.75e-08!19;UBERON:0008836!1.75e-08!19;UBERON:0007499!2.15e-08!25;UBERON:0001737!3.18e-08!9;UBERON:0009856!4.92e-08!26;UBERON:0008835!3.05e-07!22;UBERON:0003894!3.05e-07!22;UBERON:0000949!4.59e-07!45;UBERON:0005911!5.21e-07!82;UBERON:0009854!6.70e-07!23;UBERON:0003929!6.98e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.11e-28;3!UBERON:0000920;1.11e-28;3!UBERON:0002171;9.50e-11;1!UBERON:0006518;9.50e-11;1!UBERON:0008949;9.50e-11;1!UBERON:0000101;9.50e-11;1!UBERON:0002167;9.50e-11;1!UBERON:0005631;5.03e-09;10!UBERON:0000158;5.03e-09;10!UBERON:0002107;4.06e-08;19!UBERON:0006925;4.06e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.20e-29,3;UBERON:0003124,4.96e-22,7;UBERON:0005631,3.85e-11,14;UBERON:0000158,3.85e-11,14;UBERON:0002171,1.10e-10,1;UBERON:0006518,1.10e-10,1;UBERON:0008949,1.10e-10,1;UBERON:0000101,1.10e-10,1;UBERON:0002167,1.10e-10,1;UBERON:0002107,4.26e-08,19;UBERON:0006925,4.26e-08,19;UBERON:0008836,4.26e-08,19;UBERON:0000949,4.10e-07,45;UBERON:0008835,5.17e-07,22;UBERON:0003894,5.17e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,6.88735255841436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.09476419318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.3269054749798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,3.64598865519327,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14748103602986,26.5682627452926,27.487785096268,4.14701507651495,1.92354946143911,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,2.15231080825299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99679000498991,0,0,0,0,2.32991899054908,1.3393140992228,1.07140615895516,0.876246070104404,8.85847333632739,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69864615297857,0,2.07119527673598,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.1906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.4689303230431,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@TACC2 | |||
}} |
Revision as of 12:06, 10 September 2013
Short description: | p8@TACC2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_TACC2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -3bp_to_ENST00000492689, NM_206861, NM_206862, uc001lfv.2, uc001lfw.2, uc009xzx.2, uc010qtv.1_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | O95359 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.20e-29 | 3 |
germ line cell | 3.89e-13 | 7 |
germ cell | 3.89e-13 | 7 |
hepatocyte | 1.04e-12 | 12 |
epithelial cell of pancreas | 1.62e-10 | 4 |
endodermal cell | 2.86e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.20e-29 | 3 |
chorion | 4.96e-22 | 7 |
extraembryonic membrane | 3.85e-11 | 14 |
membranous layer | 3.85e-11 | 14 |
lower lobe of right lung | 1.10e-10 | 1 |
right lung lobe | 1.10e-10 | 1 |
lower lobe of lung | 1.10e-10 | 1 |
lobe of lung | 1.10e-10 | 1 |
right lung | 1.10e-10 | 1 |
liver | 4.26e-08 | 19 |
digestive gland | 4.26e-08 | 19 |
liver bud | 4.26e-08 | 19 |
endocrine system | 4.10e-07 | 45 |
hepatic diverticulum | 5.17e-07 | 22 |
liver primordium | 5.17e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.15e-11 | 1 |
endocrine pancreas cancer | 4.15e-11 | 1 |
pancreatic endocrine carcinoma | 4.15e-11 | 1 |
vascular disease | 1.21e-10 | 1 |
ischemia | 1.21e-10 | 1 |
extrinsic cardiomyopathy | 1.21e-10 | 1 |
myocardial ischemia | 1.21e-10 | 1 |
myocardial infarction | 1.21e-10 | 1 |
pancreatic cancer | 1.62e-10 | 4 |
disease of anatomical entity | 3.13e-08 | 39 |
endocrine gland cancer | 2.69e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.