FFCP PHASE1:Hg19::chr11:134122877..134122892,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29087|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29560|TSSclassifier=N|UniProt=Q9P016|association_with_transcript=345bp_to_ENST00000341541_5end|description=CAGE_peak_3_at_THYN1_5end|id=chr11:134122877..134122892,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002591;2.97e-19;1!CL:0002570;4.52e-10;8!CL:0002521;2.71e-07;3!CL:0002567;2.71e-07;3|ontology_enrichment_celltype_v019_2=CL:0002591,4.69e-19,1;CL:0002570,4.42e-10,8;CL:0002521,2.19e-07,3;CL:0002567,2.97e-07,3|ontology_enrichment_development_v019=UBERON:0010226;2.97e-19;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.37e-14!115;UBERON:0001869!3.81e-10!32;UBERON:0002619!6.30e-10!22;UBERON:0001893!2.70e-09!34;UBERON:0002791!1.23e-08!33;UBERON:0000956!2.28e-08!25;UBERON:0000203!2.28e-08!25;UBERON:0002020!2.89e-08!34;UBERON:0003528!2.89e-08!34;UBERON:0001950!5.82e-08!20;UBERON:0002346!5.94e-08!90;UBERON:0002780!6.97e-08!41;UBERON:0001890!6.97e-08!41;UBERON:0006240!6.97e-08!41;UBERON:0003080!1.37e-07!42|ontology_enrichment_uberon_v019=UBERON:0002084;2.97e-19;1!UBERON:0002082;2.97e-19;1!UBERON:0001013;2.73e-12;14!UBERON:0000078;2.60e-10;2!UBERON:0002012;2.60e-10;2!UBERON:0008886;2.60e-10;2!UBERON:0004151;2.71e-07;3!UBERON:0002190;2.71e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002084,3.25e-19,1;UBERON:0002082,3.25e-19,1;UBERON:0010226,3.25e-19,1;UBERON:0001013,2.34e-12,14;UBERON:0000078,3.27e-10,2;UBERON:0007497,3.27e-10,2;UBERON:0003643,3.27e-10,2;UBERON:0003504,3.27e-10,2;UBERON:0003469,3.27e-10,2;UBERON:0003496,3.27e-10,2;UBERON:0002012,3.27e-10,2;UBERON:0008886,3.27e-10,2;UBERON:0007303,3.27e-10,2;UBERON:0002061,3.27e-10,2;UBERON:0005432,3.27e-10,2;UBERON:0004363,3.27e-10,2;UBERON:0002190,2.19e-07,3;UBERON:0000948,2.74e-07,24;UBERON:0005498,2.74e-07,24;UBERON:0004140,2.74e-07,24;UBERON:0009881,2.74e-07,24;UBERON:0004141,2.74e-07,24;UBERON:0003084,2.74e-07,24;UBERON:0007005,2.74e-07,24;UBERON:0004139,2.74e-07,24;UBERON:0004291,2.74e-07,24;UBERON:0004151,2.79e-07,3;UBERON:0004145,3.16e-07,3|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,2.37600571456411,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0.276149695926898,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.887808626565635,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0.451961481561065,0,0,0.443175571691151,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0,0,0,0,0.121499113316049,0,0,0,0.105600336519406,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,1.40227985908335,3.32883516901568,0.757612021100357,0.7547037052577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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29087 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29560 | |||
|TSSclassifier=N | |||
|UniProt=Q9P016 | |||
|association_with_transcript=345bp_to_ENST00000341541_5end | |||
|description=CAGE_peak_3_at_THYN1_5end | |||
|id=chr11:134122877..134122892,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;2.97e-19;1!CL:0002570;4.52e-10;8!CL:0002521;2.71e-07;3!CL:0002567;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.69e-19,1;CL:0002570,4.42e-10,8;CL:0002521,2.19e-07,3;CL:0002567,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.97e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-14!115;UBERON:0001869!3.81e-10!32;UBERON:0002619!6.30e-10!22;UBERON:0001893!2.70e-09!34;UBERON:0002791!1.23e-08!33;UBERON:0000956!2.28e-08!25;UBERON:0000203!2.28e-08!25;UBERON:0002020!2.89e-08!34;UBERON:0003528!2.89e-08!34;UBERON:0001950!5.82e-08!20;UBERON:0002346!5.94e-08!90;UBERON:0002780!6.97e-08!41;UBERON:0001890!6.97e-08!41;UBERON:0006240!6.97e-08!41;UBERON:0003080!1.37e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.97e-19;1!UBERON:0002082;2.97e-19;1!UBERON:0001013;2.73e-12;14!UBERON:0000078;2.60e-10;2!UBERON:0002012;2.60e-10;2!UBERON:0008886;2.60e-10;2!UBERON:0004151;2.71e-07;3!UBERON:0002190;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,3.25e-19,1;UBERON:0002082,3.25e-19,1;UBERON:0010226,3.25e-19,1;UBERON:0001013,2.34e-12,14;UBERON:0000078,3.27e-10,2;UBERON:0007497,3.27e-10,2;UBERON:0003643,3.27e-10,2;UBERON:0003504,3.27e-10,2;UBERON:0003469,3.27e-10,2;UBERON:0003496,3.27e-10,2;UBERON:0002012,3.27e-10,2;UBERON:0008886,3.27e-10,2;UBERON:0007303,3.27e-10,2;UBERON:0002061,3.27e-10,2;UBERON:0005432,3.27e-10,2;UBERON:0004363,3.27e-10,2;UBERON:0002190,2.19e-07,3;UBERON:0000948,2.74e-07,24;UBERON:0005498,2.74e-07,24;UBERON:0004140,2.74e-07,24;UBERON:0009881,2.74e-07,24;UBERON:0004141,2.74e-07,24;UBERON:0003084,2.74e-07,24;UBERON:0007005,2.74e-07,24;UBERON:0004139,2.74e-07,24;UBERON:0004291,2.74e-07,24;UBERON:0004151,2.79e-07,3;UBERON:0004145,3.16e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,2.37600571456411,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0.276149695926898,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.887808626565635,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0.451961481561065,0,0,0.443175571691151,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0,0,0,0,0.121499113316049,0,0,0,0.105600336519406,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,1.40227985908335,3.32883516901568,0.757612021100357,0.754703705257725,0,0,1.05861646634267,0.466311601748341,0,0.159296767163702,0,0.621051827505038,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539124056983409,0,0,0.169732529954025,0,2.60265104943905,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.82046545696302,0,0.484100767249525,0.645902582527404,0,0,0,0,0,0,0,0,0.150420656698515,0,1.56302802246618,0,0,0,0.0675375846183947,1.56215619722769,0.206686796501184,0.317079050969534,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0.135982980381829,0,0,0.371995018166751,0.924351257262837,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.129177819672012,0,0,0.25458863311266,0,0,0,0.0673520530145875,0.358611026963382,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p3@THYN1 | |||
}} |
Revision as of 16:46, 10 September 2013
Short description: | p3@THYN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_THYN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 345bp_to_ENST00000341541_5end |
EntrezGene: | THYN1 |
HGNC: | 29560 |
UniProt: | Q9P016 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.69e-19 | 1 |
mesenchymal stem cell of adipose | 4.42e-10 | 8 |
subcutaneous fat cell | 2.19e-07 | 3 |
light melanocyte | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 3.25e-19 | 1 |
cardiac ventricle | 3.25e-19 | 1 |
future cardiac ventricle | 3.25e-19 | 1 |
adipose tissue | 2.34e-12 | 14 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.27e-10 | 2 |
developing epithelial placode | 3.27e-10 | 2 |
respiratory system arterial blood vessel | 3.27e-10 | 2 |
respiratory system blood vessel | 3.27e-10 | 2 |
respiratory system artery | 3.27e-10 | 2 |
head blood vessel | 3.27e-10 | 2 |
pulmonary artery | 3.27e-10 | 2 |
pulmonary vascular system | 3.27e-10 | 2 |
pharyngeal vasculature | 3.27e-10 | 2 |
truncus arteriosus | 3.27e-10 | 2 |
aortic sac | 3.27e-10 | 2 |
pharyngeal arch artery | 3.27e-10 | 2 |
subcutaneous adipose tissue | 2.19e-07 | 3 |
heart | 2.74e-07 | 24 |
primitive heart tube | 2.74e-07 | 24 |
primary heart field | 2.74e-07 | 24 |
anterior lateral plate mesoderm | 2.74e-07 | 24 |
heart tube | 2.74e-07 | 24 |
heart primordium | 2.74e-07 | 24 |
cardiac mesoderm | 2.74e-07 | 24 |
cardiogenic plate | 2.74e-07 | 24 |
heart rudiment | 2.74e-07 | 24 |
cardiac chamber | 2.79e-07 | 3 |
outflow tract | 3.16e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.