FFCP PHASE1:Hg19::chr11:61684890..61684899,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5866|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9780|TSSclassifier=S|UniProt=Q8TBN0|association_with_transcript=97bp_to_ENST00000394836,NM_013401,uc001nso.2_5end|description=CAGE_peak_8_at_RAB3IL1_5end|id=chr11:61684890..61684899,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002581;8.64e-26;1!CL:0002575;1.29e-13;2!CL:0000062;4.42e-12;9!CL:0000669;1.86e-07;4|ontology_enrichment_celltype_v019_2=CL:0002581,7.62e-26,1;CL:0002575,1.55e-13,2;CL:0000062,4.83e-10,11;CL:0000375,4.83e-10,11;CL:0000335,4.83e-10,11;CL:0000669,2.04e-07,4|ontology_enrichment_development_v019=UBERON:0010115;8.64e-26;1!CL:0000335;4.62e-10;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.18e-09!115|ontology_enrichment_uberon_v019=UBERON:0002363;8.64e-26;1!UBERON:0002360;1.29e-13;2!UBERON:0000094;1.29e-13;2!UBERON:0005406;1.29e-13;2!UBERON:0010743;1.29e-13;2!UBERON:0001013;4.41e-08;14|ontology_enrichment_uberon_v019_2=UBERON:0002363,5.93e-26,1;UBERON:0007645,5.93e-26,1;UBERON:0007647,5.93e-26,1;UBERON:0010115,5.93e-26,1;UBERON:0002360,1.07e-13,2;UBERON:0000094,1.07e-13,2;UBERON:0010743,1.07e-13,2;UBERON:0005406,1.21e-13,2;UBERON:0001013,4.34e-08,14|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,3.57656445851882,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0.157702415033935,0,0.300946099727719,2.27407504055985,2.0694614258501,0,0,0.0868836144680828,0.979005787313703,1.02943027143257,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0.632758849437452,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.538651809526579,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,1.5796644907122,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.581934098930517,0.0882561266915003,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0.429226048136571,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.752103283492572,0,0,0,0.163771917510097,0,0,0,0,0.19024743058172,0,0,0,0.351742488719241,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0.297046400327086,0.4226557275834,0,0,0.193373663920732,0,0,0,0.0802413666891683,0.730336388246517,0,0,0.315543124386369,0.339957450954573,0,0.5290268405154,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0.36757959813938,0,0.454672189309436,0,0,0,0,0.23806443146374,0.129177819672012,0.124149428591716,0.112131862580613,0.25458863311266,0,0,0.342233301085281,0.134704106029175,0.143444410785353,0.332660356546013,0,0.213454691755431,0,0,0,0.611207220914332,0.406896178315738,0.665756774185513,0.402547587182052,0|short_description=p8@RAB3IL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5866 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9780 | |||
|TSSclassifier=S | |||
|UniProt=Q8TBN0 | |||
|association_with_transcript=97bp_to_ENST00000394836,NM_013401,uc001nso.2_5end | |||
|description=CAGE_peak_8_at_RAB3IL1_5end | |||
|id=chr11:61684890..61684899,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;8.64e-26;1!CL:0002575;1.29e-13;2!CL:0000062;4.42e-12;9!CL:0000669;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,7.62e-26,1;CL:0002575,1.55e-13,2;CL:0000062,4.83e-10,11;CL:0000375,4.83e-10,11;CL:0000335,4.83e-10,11;CL:0000669,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010115;8.64e-26;1!CL:0000335;4.62e-10;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;8.64e-26;1!UBERON:0002360;1.29e-13;2!UBERON:0000094;1.29e-13;2!UBERON:0005406;1.29e-13;2!UBERON:0010743;1.29e-13;2!UBERON:0001013;4.41e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,5.93e-26,1;UBERON:0007645,5.93e-26,1;UBERON:0007647,5.93e-26,1;UBERON:0010115,5.93e-26,1;UBERON:0002360,1.07e-13,2;UBERON:0000094,1.07e-13,2;UBERON:0010743,1.07e-13,2;UBERON:0005406,1.21e-13,2;UBERON:0001013,4.34e-08,14 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,3.57656445851882,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0.157702415033935,0,0.300946099727719,2.27407504055985,2.0694614258501,0,0,0.0868836144680828,0.979005787313703,1.02943027143257,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0.632758849437452,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.538651809526579,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,1.5796644907122,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.581934098930517,0.0882561266915003,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0.429226048136571,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.752103283492572,0,0,0,0.163771917510097,0,0,0,0,0.19024743058172,0,0,0,0.351742488719241,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0.297046400327086,0.4226557275834,0,0,0.193373663920732,0,0,0,0.0802413666891683,0.730336388246517,0,0,0.315543124386369,0.339957450954573,0,0.5290268405154,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0.36757959813938,0,0.454672189309436,0,0,0,0,0.23806443146374,0.129177819672012,0.124149428591716,0.112131862580613,0.25458863311266,0,0,0.342233301085281,0.134704106029175,0.143444410785353,0.332660356546013,0,0.213454691755431,0,0,0,0.611207220914332,0.406896178315738,0.665756774185513,0.402547587182052,0 | |||
|short_description=p8@RAB3IL1 | |||
}} |
Revision as of 18:27, 10 September 2013
Short description: | p8@RAB3IL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_RAB3IL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 97bp_to_ENST00000394836, NM_013401, uc001nso.2_5end |
EntrezGene: | RAB3IL1 |
HGNC: | 9780 |
UniProt: | Q8TBN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 7.62e-26 | 1 |
central nervous system pericyte | 1.55e-13 | 2 |
osteoblast | 4.83e-10 | 11 |
osteoprogenitor cell | 4.83e-10 | 11 |
mesenchyme condensation cell | 4.83e-10 | 11 |
pericyte cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
dura mater | 5.93e-26 | 1 |
future meninx | 5.93e-26 | 1 |
ectomeninx | 5.93e-26 | 1 |
future dura mater | 5.93e-26 | 1 |
meninx | 1.07e-13 | 2 |
membrane organ | 1.07e-13 | 2 |
meningeal cluster | 1.07e-13 | 2 |
perirenal fat | 1.21e-13 | 2 |
adipose tissue | 4.34e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.