FFCP PHASE1:Hg19::chr13:44380009..44380012,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:44380009..44380012,-|id=chr13:44380009..44380012,-|ontology_enrichment_celltype=CL:0002321!1.32e-13!248;CL:0000220!4.69e-13!246;CL:0000548!9.30e-11!679;CL:0000004!9.30e-11!679;CL:0000255!9.30e-11!679;CL:0000012!2.71e-10!682;CL:0000066!2.73e-10!254;CL:0000077!8.46e-08!19;CL:0002202!3.56e-07!9;CL:0002632!3.56e-07!9|ontology_enrichment_celltype_v019=CL:0002202;3.33e-10;9!CL:0002632;3.33e-10;9!CL:0002368;1.21e-08;13!CL:0002594;2.42e-07;4!CL:0002328;3.95e-07;3|ontology_enrichment_celltype_v019_2=CL:0002202,2.51e-10,9;CL:0002632,2.51e-10,9;CL:0002368,1.13e-08,13;CL:0002321,1.31e-08,250;CL:0000066,1.92e-08,253;CL:0002594,4.19e-07,4;CL:0002328,4.78e-07,3;CL:0000082,8.92e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!3.51e-25!239;DOID:162!5.78e-24!235;DOID:0050687!7.69e-15!143;DOID:0050686!2.02e-09!137;DOID:305!4.12e-09!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:14566,4.32e-11,239;DOID:162,2.12e-10,235;DOID:0050687,2.93e-08,143|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001310;2.42e-07;4!UBERON:0004815;3.95e-07;3!UBERON:0002031;3.95e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001310,4.19e-07,4;UBERON:0004815,4.78e-07,3;UBERON:0002031,4.78e-07,3;UBERON:0004802,8.92e-07,19;UBERON:0000115,8.92e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,10.4670175195864,0.218441372130172,1.31883489114227,0.495065411840187,0.331397375727916,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0.816002764977012,0,0,0.273748850145768,0,0.152826811495903,0.246301768349837,0.0787107813136792,0,0,0,8.27479102031034,2.10844143144775,12.5716363456708,0.232401601740905,2.13253848731132,0.587200878669695,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0,0,0,0.486634870302636,0.0945348171640679,1.10864698731282,0.263504357079378,0.458426764241994,0,3.70784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.835979866147242,0,0,0,0,0,0,0,0,0,0,0.112611480483322,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0.872188104285069,0,0,0.662045904066094,2.86836620748814,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0.326923806226917,0,0,0,2.49728061464256,0,0.149448680551801,1.87895197830024,0.485618833104395,0.702254033511242,0,0.61417158655884,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0.877955241761676,0,0,0.113432183160021,0.538168907066586,0,0,0.600182192168805,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0.504867548488229,0,0,0.355009592516614,0,0.67824236924195,0.193260853163297,1.09098448236334,0.286804595389004,1.09776335516636,0.530119073285941,1.85910308591229,0.932949495138334,2.27088765788066,1.09493207722749,3.12899064659632,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.964044119533928,0.441175890929576,0.435758888184812,0.474541238222193,0,0,0.38474715694639,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,1.09750285408626,0,0.703702806881416,0.740707561268237,0,0,1.44331342025273,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0.895585227028483,1.16253575405585,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.22001485746285,0,0,0,0,0,0.514414748524284,0,0.532844358032199,0,0,5.76268235746538,0,0,1.58390374586686,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.224170287987055,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.532685175939381,0.492762936082855,0,0.232420756919918,0.120859449591622,0.200506470303285,0,0.114814448164607,0.364182336013434,0,0,0,0.784349769176855,0,0,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,1.95018073810956,0,0,3.54311819363682,2.76306614507033,1.65403886981437,0.537101224341368,1.16013355131383,1.70453254832202,0.178064071293475,0.165284915360978,0,2.04180339991335,0,0,2.51849877464512,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0,0.429374660225974,0,0,0.190630193923825,0.767693373934002,0,0.318203247925937,1.56989728039846,0.359744915166629,0.54907405947211,0.117812402345686,0.606547444719948,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.136499911407986,0,0,1.10273068709225,0,0,0.578775534266688,0,1.01455188481352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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:44380009..44380012,- | |||
|id=chr13:44380009..44380012,- | |||
|ontology_enrichment_celltype=CL:0002321!1.32e-13!248;CL:0000220!4.69e-13!246;CL:0000548!9.30e-11!679;CL:0000004!9.30e-11!679;CL:0000255!9.30e-11!679;CL:0000012!2.71e-10!682;CL:0000066!2.73e-10!254;CL:0000077!8.46e-08!19;CL:0002202!3.56e-07!9;CL:0002632!3.56e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002202;3.33e-10;9!CL:0002632;3.33e-10;9!CL:0002368;1.21e-08;13!CL:0002594;2.42e-07;4!CL:0002328;3.95e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,2.51e-10,9;CL:0002632,2.51e-10,9;CL:0002368,1.13e-08,13;CL:0002321,1.31e-08,250;CL:0000066,1.92e-08,253;CL:0002594,4.19e-07,4;CL:0002328,4.78e-07,3;CL:0000082,8.92e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.51e-25!239;DOID:162!5.78e-24!235;DOID:0050687!7.69e-15!143;DOID:0050686!2.02e-09!137;DOID:305!4.12e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.32e-11,239;DOID:162,2.12e-10,235;DOID:0050687,2.93e-08,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;2.42e-07;4!UBERON:0004815;3.95e-07;3!UBERON:0002031;3.95e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,4.19e-07,4;UBERON:0004815,4.78e-07,3;UBERON:0002031,4.78e-07,3;UBERON:0004802,8.92e-07,19;UBERON:0000115,8.92e-07,19 | |||
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| |||
|short_description=p@chr13:44380009..44380012,- | |||
}} |
Revision as of 02:17, 11 September 2013
Short description: | p@chr13:44380009..44380012, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:44380009..44380012, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 2.51e-10 | 9 |
epithelial cell of lower respiratory tract | 2.51e-10 | 9 |
respiratory epithelial cell | 1.13e-08 | 13 |
embryonic cell | 1.31e-08 | 250 |
epithelial cell | 1.92e-08 | 253 |
smooth muscle cell of the umbilical artery | 4.19e-07 | 4 |
bronchial epithelial cell | 4.78e-07 | 3 |
epithelial cell of lung | 8.92e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 4.19e-07 | 4 |
lower respiratory tract epithelium | 4.78e-07 | 3 |
epithelium of bronchus | 4.78e-07 | 3 |
respiratory tract epithelium | 8.92e-07 | 19 |
lung epithelium | 8.92e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.32e-11 | 239 |
cancer | 2.12e-10 | 235 |
cell type cancer | 2.93e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.