FFCP PHASE1:Hg19::chr14:61788429..61788501,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5583|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9403|TSSclassifier=S|UniProt=P24723|association_with_transcript=0bp_to_ENST00000332981_5end|coexpression_cluster_id=C18|description=CAGE_peak_1_at_PRKCH_5end|id=chr14:61788429..61788501,+|ontology_enrichment_celltype=CL:0000115!4.89e-14!35;CL:0000791!1.37e-13!18;CL:0000789!1.37e-13!18;CL:0002420!1.37e-13!18;CL:0002419!1.37e-13!18;CL:0000790!1.37e-13!18;CL:0002139!2.03e-13!24;CL:0000738!8.12e-12!140;CL:0000084!9.65e-12!25;CL:0000827!9.65e-12!25;CL:0000071!2.81e-10!18;CL:0002546!2.81e-10!18;CL:0002078!5.52e-10!44;CL:0002087!3.75e-09!119;CL:0000625!6.39e-09!11;CL:0002031!1.07e-08!124;CL:0000838!1.89e-08!52;CL:0000542!6.22e-08!53;CL:0000051!6.22e-08!53;CL:0000037!6.31e-08!172;CL:0000566!6.31e-08!172|ontology_enrichment_celltype_v019=CL:0000791;1.22e-14;18!CL:0000789;1.22e-14;18!CL:0002419;1.22e-14;18!CL:0002139;1.83e-14;24!CL:0000115;1.03e-13;36!CL:0000084;1.83e-12;25!CL:0000071;4.84e-11;18!CL:0000625;1.45e-09;11!CL:0002078;1.29e-07;45|ontology_enrichment_celltype_v019_2=CL:0000115,5.69e-16,36;CL:0000791,1.26e-14,18;CL:0000789,1.26e-14,18;CL:0002420,1.26e-14,18;CL:0002419,1.26e-14,18;CL:0000790,1.26e-14,18;CL:0002139,1.93e-14,24;CL:0000084,1.88e-12,25;CL:0000827,1.88e-12,25;CL:0000738,1.88e-12,136;CL:0000071,4.99e-11,18;CL:0002546,4.99e-11,18;CL:0002078,7.68e-11,45;CL:0002087,6.05e-10,115;CL:0000625,1.48e-09,11;CL:0002031,2.42e-09,120;CL:0000838,1.34e-08,52;CL:0000037,2.22e-08,168;CL:0000542,3.76e-08,53;CL:0000051,3.76e-08,53;CL:0000988,9.48e-07,177|ontology_enrichment_development_v019=CL:0000790;1.22e-14;18!CL:0002546;4.84e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.20e-23!115;UBERON:0001986!2.81e-10!18;UBERON:0004638!2.81e-10!18;UBERON:0004852!2.81e-10!18;UBERON:0000487!1.48e-08!22;UBERON:0002193!6.44e-08!112;UBERON:0006914!3.58e-07!25|ontology_enrichment_uberon_v019=UBERON:0004638;4.84e-11;18!UBERON:0001986;4.84e-11;18!UBERON:0004852;4.84e-11;18!UBERON:0000487;1.67e-08;22!UBERON:0006914;5.12e-07;25!UBERON:0007023;6.21e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.33e-24,114;UBERON:0004638,4.99e-11,18;UBERON:0001986,4.99e-11,18;UBERON:0004852,4.99e-11,18;UBERON:0002193,3.20e-09,108;UBERON:0000487,1.75e-08,22;UBERON:0002390,4.17e-07,98;UBERON:0003061,4.17e-07,98;UBERON:0006914,5.95e-07,25|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.737201809504527,1.39560233594486,2.40285509343189,1.84636884759917,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,28.7314405612297,21.6745556147857,22.5899942370259,33.8293278090057,62.1803624917485,38.5492147057029,2.75826367343678,2.10844143144775,2.21852406100073,0,0,10.2760153767197,32.6857291033808,36.2985449920956,50.3465220060776,7.83704159839735,22.9964502873475,8.75756929956234,3.34415949192999,1.51150377475524,1.94067248950253,2.78914844286822,2.05583944010913,3.71647645074124,3.45230870786581,4.09857130446561,1.6553756092201,5.86067657252252,3.22742341791913,6.77132432971709,3.38836211176688,1.63743690034707,2.02251136000576,2.75475503133812,4.49300637906531,5.11469700639233,2.96866170168044,2.79249120670285,2.98357325372886,1.7412554317715,2.26954089876456,2.4912889959823,3.51748131359441,3.12889751052121,1.95469960234605,4.84319602106695,2.94622108790052,3.48108626184973,0.845021145247767,0.850417199860174,0.419317291016752,2.58355851636939,1.95229960693958,0.964353520182481,0.570025487482497,0.39783335439818,0,1.75996244461323,0,0.889509253863555,0.853460445133014,0,1.14950487990897,0,1.90810750907073,1.70763890732835,1.17447437874188,2.29363936875137,22.4691258584344,37.5540737197629,6.05783394982677,164.842787355392,123.405379503238,125.6225158887,93.7916239141704,122.872694520864,108.419547513254,87.6720277835601,57.153564382094,102.522855801243,83.2967443634415,89.9068827699852,53.1578976861552,52.2838577190711,83.5344555386675,75.9962548911083,97.0840337212426,122.484701171862,110.494362001051,104.535523804977,88.9478340175895,136.043275228682,121.300488255368,105.003172188094,106.719413798572,111.335270609448,96.9461085337342,109.919836926774,112.500231204734,99.9445812418767,94.2373463135187,110.03115158742,173.785012659719,162.068758644805,151.486326461408,0,0,1.91793842765295,0.361439152384566,1.00267582127178,0.579386075843295,0,0,0.472674085820339,0,0.966182642624386,9.75794112457959,2.5500670180478,4.44941331341315,1.62273696827342,1.74129737299267,1.19662164466979,10.9705687180457,17.1598473234038,7.80060752792086,25.640350550305,22.3660994727592,31.2426451446835,27.1347812123525,31.4624577157429,31.0883387392276,21.7354765198283,52.2001853522044,43.4034840477786,59.5802690721113,34.2404919542775,22.8081631715554,35.8771224595809,39.339949597008,33.2158198631521,43.9354663157672,35.700170247561,32.9951637816134,21.4643292452237,23.7316414892032,24.9154371745354,9.22462922052443,3.87780264148325,3.05265836499774,0.49697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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |||
|TSSclassifier=S | |||
|UniProt=P24723 | |||
|association_with_transcript=0bp_to_ENST00000332981_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_PRKCH_5end | |||
|id=chr14:61788429..61788501,+ | |||
|ontology_enrichment_celltype=CL:0000115!4.89e-14!35;CL:0000791!1.37e-13!18;CL:0000789!1.37e-13!18;CL:0002420!1.37e-13!18;CL:0002419!1.37e-13!18;CL:0000790!1.37e-13!18;CL:0002139!2.03e-13!24;CL:0000738!8.12e-12!140;CL:0000084!9.65e-12!25;CL:0000827!9.65e-12!25;CL:0000071!2.81e-10!18;CL:0002546!2.81e-10!18;CL:0002078!5.52e-10!44;CL:0002087!3.75e-09!119;CL:0000625!6.39e-09!11;CL:0002031!1.07e-08!124;CL:0000838!1.89e-08!52;CL:0000542!6.22e-08!53;CL:0000051!6.22e-08!53;CL:0000037!6.31e-08!172;CL:0000566!6.31e-08!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.22e-14;18!CL:0000789;1.22e-14;18!CL:0002419;1.22e-14;18!CL:0002139;1.83e-14;24!CL:0000115;1.03e-13;36!CL:0000084;1.83e-12;25!CL:0000071;4.84e-11;18!CL:0000625;1.45e-09;11!CL:0002078;1.29e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.69e-16,36;CL:0000791,1.26e-14,18;CL:0000789,1.26e-14,18;CL:0002420,1.26e-14,18;CL:0002419,1.26e-14,18;CL:0000790,1.26e-14,18;CL:0002139,1.93e-14,24;CL:0000084,1.88e-12,25;CL:0000827,1.88e-12,25;CL:0000738,1.88e-12,136;CL:0000071,4.99e-11,18;CL:0002546,4.99e-11,18;CL:0002078,7.68e-11,45;CL:0002087,6.05e-10,115;CL:0000625,1.48e-09,11;CL:0002031,2.42e-09,120;CL:0000838,1.34e-08,52;CL:0000037,2.22e-08,168;CL:0000542,3.76e-08,53;CL:0000051,3.76e-08,53;CL:0000988,9.48e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.22e-14;18!CL:0002546;4.84e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.20e-23!115;UBERON:0001986!2.81e-10!18;UBERON:0004638!2.81e-10!18;UBERON:0004852!2.81e-10!18;UBERON:0000487!1.48e-08!22;UBERON:0002193!6.44e-08!112;UBERON:0006914!3.58e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.84e-11;18!UBERON:0001986;4.84e-11;18!UBERON:0004852;4.84e-11;18!UBERON:0000487;1.67e-08;22!UBERON:0006914;5.12e-07;25!UBERON:0007023;6.21e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.33e-24,114;UBERON:0004638,4.99e-11,18;UBERON:0001986,4.99e-11,18;UBERON:0004852,4.99e-11,18;UBERON:0002193,3.20e-09,108;UBERON:0000487,1.75e-08,22;UBERON:0002390,4.17e-07,98;UBERON:0003061,4.17e-07,98;UBERON:0006914,5.95e-07,25 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.737201809504527,1.39560233594486,2.40285509343189,1.84636884759917,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,28.7314405612297,21.6745556147857,22.5899942370259,33.8293278090057,62.1803624917485,38.5492147057029,2.75826367343678,2.10844143144775,2.21852406100073,0,0,10.2760153767197,32.6857291033808,36.2985449920956,50.3465220060776,7.83704159839735,22.9964502873475,8.75756929956234,3.34415949192999,1.51150377475524,1.94067248950253,2.78914844286822,2.05583944010913,3.71647645074124,3.45230870786581,4.09857130446561,1.6553756092201,5.86067657252252,3.22742341791913,6.77132432971709,3.38836211176688,1.63743690034707,2.02251136000576,2.75475503133812,4.49300637906531,5.11469700639233,2.96866170168044,2.79249120670285,2.98357325372886,1.7412554317715,2.26954089876456,2.4912889959823,3.51748131359441,3.12889751052121,1.95469960234605,4.84319602106695,2.94622108790052,3.48108626184973,0.845021145247767,0.850417199860174,0.419317291016752,2.58355851636939,1.95229960693958,0.964353520182481,0.570025487482497,0.39783335439818,0,1.75996244461323,0,0.889509253863555,0.853460445133014,0,1.14950487990897,0,1.90810750907073,1.70763890732835,1.17447437874188,2.29363936875137,22.4691258584344,37.5540737197629,6.05783394982677,164.842787355392,123.405379503238,125.6225158887,93.7916239141704,122.872694520864,108.419547513254,87.6720277835601,57.153564382094,102.522855801243,83.2967443634415,89.9068827699852,53.1578976861552,52.2838577190711,83.5344555386675,75.9962548911083,97.0840337212426,122.484701171862,110.494362001051,104.535523804977,88.9478340175895,136.043275228682,121.300488255368,105.003172188094,106.719413798572,111.335270609448,96.9461085337342,109.919836926774,112.500231204734,99.9445812418767,94.2373463135187,110.03115158742,173.785012659719,162.068758644805,151.486326461408,0,0,1.91793842765295,0.361439152384566,1.00267582127178,0.579386075843295,0,0,0.472674085820339,0,0.966182642624386,9.75794112457959,2.5500670180478,4.44941331341315,1.62273696827342,1.74129737299267,1.19662164466979,10.9705687180457,17.1598473234038,7.80060752792086,25.640350550305,22.3660994727592,31.2426451446835,27.1347812123525,31.4624577157429,31.0883387392276,21.7354765198283,52.2001853522044,43.4034840477786,59.5802690721113,34.2404919542775,22.8081631715554,35.8771224595809,39.339949597008,33.2158198631521,43.9354663157672,35.700170247561,32.9951637816134,21.4643292452237,23.7316414892032,24.9154371745354,9.22462922052443,3.87780264148325,3.05265836499774,0.496971951695318,0.12663051166458,0,0,3.19201543978521,0.560677600142307,0,0,0,4.98429486657846,2.28846664358842,0.302714855289863,0,0,0,4.56377457235559,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.300476117813194,1.92834711372036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,3.00020732649918,2.29443676311203,0,0.132529768321485,0.232387885739037,0.932949495138334,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,2.83936320095625,3.03452442140583,3.13314338848527,3.08823123650703,3.26819166138609,2.37270619111097,2.29213223872279,1.76599318612811,1.92373578473195,38.3840836404817,9.81692416624121,0.4115740113314,0,0,1.96565443335525,8.27105869353966,11.0365774853663,3.44367627920718,0,2.63400684980701,1.1240175325762,3.01586917234893,4.0738915869753,0,0,1.44331342025273,0,0.352226082707465,27.8627244178872,25.4642031917136,25.8745647039054,2.37061319387782,6.00940313466411,3.20082107913617,6.31811515875942,2.67536092119711,3.74935335947108,1.51183915378974,3.40260233381728,2.14940454486836,2.03443756959773,1.53353071666084,6.40462209264727,0.352193736052904,10.3664057770386,17.0061545032014,6.69084897159814,1.65094525159639,1.52795370223311,1.17217447210047,5.13217338068116,0.514137463516618,0,3.42991719156694,0.448524337381443,0,0.1466765716419,0,0,3.381211010224,0,0,0,0,0,0,0,0,2.93162565864362,0,0,0,0,0.399891964728228,1.2162378064119,0,0,0.958499421966331,2.29723871668228,0,0,0,0.179060963239896,48.0845267732232,161.368192605378,154.604971174274,161.327196603644,0,0,0,0,0,1.49801404789436,0,7.0450637284126,0.12269149171914,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,105.658461348795,69.4599726635946,96.3749846965102,1.21251028578504,1.66435439510497,2.41912234663744,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,1.81289174387433,2.20557117333613,4.60404944679482,0,0,0,3.15839729035188,1.00119938235739,0,0,0.105551628892876,40.9440182655228,29.0860236022842,17.057357372069,24.6763604304463,0,0,0.764628819135115,1.66215201785745,0.671624264166535,0,0,0,0.328014645699706,0,15.8683157937492,0.0915694648183434,0,1.72279661398852,0,0,0.096670718292122,0,0,0,0,0,0.681813019328807,0,3.47098322258054,3.2672311452068,8.0396008871588,2.73126008309985,0,0,0,0.924100740528266,0,0,2.40921484835096,0.286249773483982,0,0.632758849437452,0.571890581771475,0,0,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0.974853958525138,0,0.136499911407986,0,0,0,0.66343897524122,7.0152141640602,0,0,0,4.64735247149625,0,0,0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| |||
|short_description=p1@PRKCH | |||
}} |
Revision as of 05:00, 11 September 2013
Short description: | p1@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PRKCH_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000332981_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | P24723 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.69e-16 | 36 |
mature alpha-beta T cell | 1.26e-14 | 18 |
alpha-beta T cell | 1.26e-14 | 18 |
immature T cell | 1.26e-14 | 18 |
mature T cell | 1.26e-14 | 18 |
immature alpha-beta T cell | 1.26e-14 | 18 |
endothelial cell of vascular tree | 1.93e-14 | 24 |
T cell | 1.88e-12 | 25 |
pro-T cell | 1.88e-12 | 25 |
leukocyte | 1.88e-12 | 136 |
blood vessel endothelial cell | 4.99e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.99e-11 | 18 |
meso-epithelial cell | 7.68e-11 | 45 |
nongranular leukocyte | 6.05e-10 | 115 |
CD8-positive, alpha-beta T cell | 1.48e-09 | 11 |
hematopoietic lineage restricted progenitor cell | 2.42e-09 | 120 |
lymphoid lineage restricted progenitor cell | 1.34e-08 | 52 |
hematopoietic stem cell | 2.22e-08 | 168 |
lymphocyte | 3.76e-08 | 53 |
common lymphoid progenitor | 3.76e-08 | 53 |
hematopoietic cell | 9.48e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.33e-24 | 114 |
blood vessel endothelium | 4.99e-11 | 18 |
endothelium | 4.99e-11 | 18 |
cardiovascular system endothelium | 4.99e-11 | 18 |
hemolymphoid system | 3.20e-09 | 108 |
simple squamous epithelium | 1.75e-08 | 22 |
hematopoietic system | 4.17e-07 | 98 |
blood island | 4.17e-07 | 98 |
squamous epithelium | 5.95e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.