FFCP PHASE1:Hg19::chr15:63188956..63188961,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:63188956..63188961,-|id=chr15:63188956..63188961,-|ontology_enrichment_celltype=CL:0000066!3.37e-13!254;CL:0000243!1.81e-11!15;CL:0000125!1.81e-11!15;CL:0000030!1.81e-11!15;CL:0000339!1.81e-11!15;CL:0000095!6.20e-10!17;CL:0000123!6.20e-10!17;CL:0002319!8.06e-10!25;CL:0000076!4.88e-08!62;CL:0000221!1.43e-07!71;CL:0000133!1.47e-07!59;CL:0000548!3.27e-07!679;CL:0000004!3.27e-07!679;CL:0000255!3.27e-07!679;CL:0000012!4.77e-07!682;CL:0000220!7.17e-07!246|ontology_enrichment_celltype_v019=CL:1001319;6.58e-10;1!CL:1000600;6.58e-10;1|ontology_enrichment_celltype_v019_2=CL:1001319,5.31e-10,1;CL:1000600,5.31e-10,1|ontology_enrichment_development_v019=UBERON:0007123;1.04e-07;5!UBERON:0006238;1.69e-07;10|ontology_enrichment_disease=DOID:14566!2.58e-20!239;DOID:162!2.00e-19!235;DOID:305!1.09e-15!106;DOID:0050687!1.14e-15!143;DOID:3093!5.24e-10!11;DOID:1749!6.08e-10!14;DOID:3908!6.11e-08!5|ontology_enrichment_disease_v019=DOID:3347;6.58e-10;1!DOID:0060085;1.55e-09;1!DOID:3165;1.55e-09;1!DOID:0060121;1.55e-09;1!DOID:3111;1.55e-09;1!DOID:2438;1.55e-09;1!DOID:4418;1.55e-09;1!DOID:3112;1.55e-09;1!DOID:3603;1.55e-09;1!DOID:3093;6.56e-07;11|ontology_enrichment_disease_v019_2=DOID:3347,8.17e-10,1;DOID:3111,9.70e-10,1;DOID:3603,9.70e-10,1;DOID:0060085,1.62e-09,1;DOID:3165,1.62e-09,1;DOID:0060121,1.62e-09,1;DOID:2438,1.62e-09,1;DOID:4418,1.62e-09,1;DOID:3112,1.76e-09,1;DOID:162,2.47e-08,235;DOID:14566,4.28e-08,239;DOID:3093,5.99e-07,11|ontology_enrichment_uberon=UBERON:0002394!2.69e-07!4;UBERON:0003928!2.69e-07!4|ontology_enrichment_uberon_v019=UBERON:0004645;6.58e-10;1!UBERON:0007195;6.58e-10;1!UBERON:0001256;6.58e-10;1!UBERON:0001259;6.58e-10;1!UBERON:0004913;1.55e-09;1!UBERON:0003703;1.55e-09;1!UBERON:0001174;1.55e-09;1!UBERON:0004914;1.55e-09;1!UBERON:0002046;1.04e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0004645,5.31e-10,1;UBERON:0001256,5.31e-10,1;UBERON:0001259,5.31e-10,1;UBERON:0007195,7.50e-10,1;UBERON:0004913,2.67e-09,1;UBERON:0003703,2.67e-09,1;UBERON:0001174,2.67e-09,1;UBERON:0004914,2.67e-09,1;UBERON:0002046,1.08e-07,5;UBERON:0004117,1.08e-07,5;UBERON:0007689,1.08e-07,5;UBERON:0007123,1.08e-07,5;UBERON:0003091,1.08e-07,5|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0,0.779160935160341,0,0.211125408127993,0,0,0,0.20453736500431,0,0,0.898683511473268,0.179021174675609,0,0,0,2.22273980289274,0,0,0,0,0.787139999965761,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,1.13852239634511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.435296032902013,0,0.343972064943233,0.0967563312890851,0,0,0,0,0,3.15196426687527,1.39100228192093,0,0,0.160317640503067,0,0.39961921916426,0,0,0,0,0.248505071130865,0,2.71808412147228,4.07951100618099,0.713987523454252,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0.335434687599266,0,0,0.316801009558219,0.179287339332845,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:63188956..63188961,- | |||
|id=chr15:63188956..63188961,- | |||
|ontology_enrichment_celltype=CL:0000066!3.37e-13!254;CL:0000243!1.81e-11!15;CL:0000125!1.81e-11!15;CL:0000030!1.81e-11!15;CL:0000339!1.81e-11!15;CL:0000095!6.20e-10!17;CL:0000123!6.20e-10!17;CL:0002319!8.06e-10!25;CL:0000076!4.88e-08!62;CL:0000221!1.43e-07!71;CL:0000133!1.47e-07!59;CL:0000548!3.27e-07!679;CL:0000004!3.27e-07!679;CL:0000255!3.27e-07!679;CL:0000012!4.77e-07!682;CL:0000220!7.17e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:1001319;6.58e-10;1!CL:1000600;6.58e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,5.31e-10,1;CL:1000600,5.31e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.04e-07;5!UBERON:0006238;1.69e-07;10 | |||
|ontology_enrichment_disease=DOID:14566!2.58e-20!239;DOID:162!2.00e-19!235;DOID:305!1.09e-15!106;DOID:0050687!1.14e-15!143;DOID:3093!5.24e-10!11;DOID:1749!6.08e-10!14;DOID:3908!6.11e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:3347;6.58e-10;1!DOID:0060085;1.55e-09;1!DOID:3165;1.55e-09;1!DOID:0060121;1.55e-09;1!DOID:3111;1.55e-09;1!DOID:2438;1.55e-09;1!DOID:4418;1.55e-09;1!DOID:3112;1.55e-09;1!DOID:3603;1.55e-09;1!DOID:3093;6.56e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,8.17e-10,1;DOID:3111,9.70e-10,1;DOID:3603,9.70e-10,1;DOID:0060085,1.62e-09,1;DOID:3165,1.62e-09,1;DOID:0060121,1.62e-09,1;DOID:2438,1.62e-09,1;DOID:4418,1.62e-09,1;DOID:3112,1.76e-09,1;DOID:162,2.47e-08,235;DOID:14566,4.28e-08,239;DOID:3093,5.99e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0002394!2.69e-07!4;UBERON:0003928!2.69e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;6.58e-10;1!UBERON:0007195;6.58e-10;1!UBERON:0001256;6.58e-10;1!UBERON:0001259;6.58e-10;1!UBERON:0004913;1.55e-09;1!UBERON:0003703;1.55e-09;1!UBERON:0001174;1.55e-09;1!UBERON:0004914;1.55e-09;1!UBERON:0002046;1.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,5.31e-10,1;UBERON:0001256,5.31e-10,1;UBERON:0001259,5.31e-10,1;UBERON:0007195,7.50e-10,1;UBERON:0004913,2.67e-09,1;UBERON:0003703,2.67e-09,1;UBERON:0001174,2.67e-09,1;UBERON:0004914,2.67e-09,1;UBERON:0002046,1.08e-07,5;UBERON:0004117,1.08e-07,5;UBERON:0007689,1.08e-07,5;UBERON:0007123,1.08e-07,5;UBERON:0003091,1.08e-07,5 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0,0.779160935160341,0,0.211125408127993,0,0,0,0.20453736500431,0,0,0.898683511473268,0.179021174675609,0,0,0,2.22273980289274,0,0,0,0,0.787139999965761,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,1.13852239634511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.435296032902013,0,0.343972064943233,0.0967563312890851,0,0,0,0,0,3.15196426687527,1.39100228192093,0,0,0.160317640503067,0,0.39961921916426,0,0,0,0,0.248505071130865,0,2.71808412147228,4.07951100618099,0.713987523454252,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0.335434687599266,0,0,0.316801009558219,0.179287339332845,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,1.62474530350739,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0.643324774124777,1.82696004375648,0,0.463044948647668,0.489473409012935,0,0,0.438568099157414,0.176689145945881,0,0,0.512483037175893,1.0362910251936,0.303859956177382,0,0,0,0,2.29326894192489,0.491545817507439,1.90180911022764,0,0,0,0,0.552317850755522,0,0,0,0,0.314531883711793,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.693153996902029,0.381382095467167,2.0710797781803,0.397832444232549,0,0,0,0,1.31017534008077,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,3.78220290828698,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591660003652827,0.340853619036631,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.357107877211315,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.327796715891087,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,4.48527450322454,0,0,0,0,0,0,0,2.76771113277313,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr15:63188956..63188961,- | |||
}} |
Revision as of 07:45, 11 September 2013
Short description: | p@chr15:63188956..63188961, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:63188956..63188961, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 5.31e-10 | 1 |
lower urinary tract cell | 5.31e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 5.31e-10 | 1 |
wall of urinary bladder | 5.31e-10 | 1 |
mucosa of urinary bladder | 5.31e-10 | 1 |
stroma of bone marrow | 7.50e-10 | 1 |
hepatopancreatic ampulla | 2.67e-09 | 1 |
extrahepatic bile duct | 2.67e-09 | 1 |
common bile duct | 2.67e-09 | 1 |
duodenal papilla | 2.67e-09 | 1 |
thyroid gland | 1.08e-07 | 5 |
pharyngeal pouch | 1.08e-07 | 5 |
thyroid diverticulum | 1.08e-07 | 5 |
pharyngeal pouch 2 | 1.08e-07 | 5 |
thyroid primordium | 1.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 8.17e-10 | 1 |
cystadenocarcinoma | 9.70e-10 | 1 |
mucinous cystadenocarcinoma | 9.70e-10 | 1 |
organ system benign neoplasm | 1.62e-09 | 1 |
skin benign neoplasm | 1.62e-09 | 1 |
integumentary system benign neoplasm | 1.62e-09 | 1 |
dermis tumor | 1.62e-09 | 1 |
cutaneous fibrous histiocytoma | 1.62e-09 | 1 |
papillary adenocarcinoma | 1.76e-09 | 1 |
cancer | 2.47e-08 | 235 |
disease of cellular proliferation | 4.28e-08 | 239 |
nervous system cancer | 5.99e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.