FFCP PHASE1:Hg19::chr16:15489650..15489670,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=255027|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26827|TSSclassifier=S|UniProt=Q2QL34|association_with_transcript=39bp_to_ENST00000287594,ENST00000396385,NM_001128423,NM_173803,uc002ddm.2,uc002ddn.2_5end|coexpression_cluster_id=C55|description=CAGE_peak_4_at_MPV17L_5end|id=chr16:15489650..15489670,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;3.55e-14;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.72e-14,12;CL:0000223,4.19e-09,58|ontology_enrichment_development_v019=UBERON:0004161;1.62e-11;11!UBERON:0009497;1.25e-09;13!UBERON:0003104;1.46e-09;31|ontology_enrichment_disease=DOID:305!9.63e-10!106;DOID:0050687!1.31e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,2.81e-09,106;DOID:0050687,4.63e-08,143|ontology_enrichment_uberon=UBERON:0001049!3.27e-16!57;UBERON:0005068!3.27e-16!57;UBERON:0006241!3.27e-16!57;UBERON:0007135!3.27e-16!57;UBERON:0002616!3.86e-16!59;UBERON:0000955!5.69e-14!69;UBERON:0006238!5.69e-14!69;UBERON:0005743!8.62e-14!86;UBERON:0001017!9.98e-14!82;UBERON:0000073!1.57e-13!94;UBERON:0001016!1.57e-13!94;UBERON:0003080!1.91e-13!42;UBERON:0002346!2.96e-13!90;UBERON:0003075!4.18e-13!86;UBERON:0007284!4.18e-13!86;UBERON:0002780!6.81e-13!41;UBERON:0001890!6.81e-13!41;UBERON:0006240!6.81e-13!41;UBERON:0007023!6.86e-13!115;UBERON:0003056!1.03e-12!61;UBERON:0001893!1.97e-10!34;UBERON:0002020!3.65e-10!34;UBERON:0003528!3.65e-10!34;UBERON:0002791!6.58e-10!33;UBERON:0001869!8.88e-10!32;UBERON:0000033!1.26e-07!123;UBERON:0001737!3.44e-07!9;UBERON:0000153!3.67e-07!129;UBERON:0007811!3.67e-07!129;UBERON:0000956!4.58e-07!25;UBERON:0000203!4.58e-07!25;UBERON:0002619!5.33e-07!22|ontology_enrichment_uberon_v019=UBERON:0002107;3.91e-11;19!UBERON:0006925;3.91e-11;19!UBERON:0002368;1.01e-09;33!UBERON:0000949;2.99e-09;43!UBERON:0003296;9.36e-09;4!UBERON:0010133;9.36e-09;4!UBERON:0000007;1.50e-08;2!UBERON:0002423;4.04e-08;25!UBERON:0002365;5.88e-08;31!UBERON:0002330;5.88e-08;31|ontology_enrichment_uberon_v019_2=UBERON:0000949,9.83e-13,45;UBERON:0002107,3.42e-11,19;UBERON:0006925,3.42e-11,19;UBERON:0008836,3.42e-11,19;UBERON:0002368,1.99e-10,35;UBERON:0007499,3.75e-10,25;UBERON:0009856,1.07e-09,26;UBERON:0008835,1.80e-09,22;UBERON:0003894,1.80e-09,22;UBERON:0009854,5.37e-09,23;UBERON:0003296,6.88e-09,4;UBERON:0010133,6.88e-09,4;UBERON:0000007,1.54e-08,2;UBERON:0009497,3.66e-08,25;UBERON:0000015,3.66e-08,25;UBERON:0002423,3.66e-08,25;UBERON:0006235,3.66e-08,25;UBERON:0004161,3.66e-08,25;UBERON:0002365,4.98e-08,31;UBERON:0002330,4.98e-08,31;UBERON:0002530,1.22e-07,59;UBERON:0011216,3.11e-07,223;UBERON:0005172,5.70e-07,54;UBERON:0005173,5.70e-07,54|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,2.09340350391728,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.940364164434263,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.541607727530031,0,0,0.164437904603676,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0.113309342697566,0,0.34362744548263,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.087834785693126,1.0478326039817,0.364295288292542,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.609868530647977,0.397589304964456,0.464775771478074,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,0,0.709840800239063,0.505754070234305,0.723033089650446,0.772057809126758,1.52515610864684,0.949082476444386,0.943819157121151,0.588664395376038,0.769494313892781,0,0,0,0,2.53510069643662,0,2.36315962672562,0,6.88735255841436,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0.383382679165211,1.47798971368783,0.088048434013226,0.207328115540772,0.576479813667846,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0,0,0,0,0,4.47179963489002,0,0.0920809889358963,0,0,0,0,0,1.56869953835371,1.46139224653261,0,0,0,0.215915916102139,0,0.812839312631559,0,0.509752546090077,0.831076008928724,0,0,1.04574180409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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=255027 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26827 | |||
|TSSclassifier=S | |||
|UniProt=Q2QL34 | |||
|association_with_transcript=39bp_to_ENST00000287594,ENST00000396385,NM_001128423,NM_173803,uc002ddm.2,uc002ddn.2_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_4_at_MPV17L_5end | |||
|id=chr16:15489650..15489670,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.55e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.72e-14,12;CL:0000223,4.19e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.62e-11;11!UBERON:0009497;1.25e-09;13!UBERON:0003104;1.46e-09;31 | |||
|ontology_enrichment_disease=DOID:305!9.63e-10!106;DOID:0050687!1.31e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.81e-09,106;DOID:0050687,4.63e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.27e-16!57;UBERON:0005068!3.27e-16!57;UBERON:0006241!3.27e-16!57;UBERON:0007135!3.27e-16!57;UBERON:0002616!3.86e-16!59;UBERON:0000955!5.69e-14!69;UBERON:0006238!5.69e-14!69;UBERON:0005743!8.62e-14!86;UBERON:0001017!9.98e-14!82;UBERON:0000073!1.57e-13!94;UBERON:0001016!1.57e-13!94;UBERON:0003080!1.91e-13!42;UBERON:0002346!2.96e-13!90;UBERON:0003075!4.18e-13!86;UBERON:0007284!4.18e-13!86;UBERON:0002780!6.81e-13!41;UBERON:0001890!6.81e-13!41;UBERON:0006240!6.81e-13!41;UBERON:0007023!6.86e-13!115;UBERON:0003056!1.03e-12!61;UBERON:0001893!1.97e-10!34;UBERON:0002020!3.65e-10!34;UBERON:0003528!3.65e-10!34;UBERON:0002791!6.58e-10!33;UBERON:0001869!8.88e-10!32;UBERON:0000033!1.26e-07!123;UBERON:0001737!3.44e-07!9;UBERON:0000153!3.67e-07!129;UBERON:0007811!3.67e-07!129;UBERON:0000956!4.58e-07!25;UBERON:0000203!4.58e-07!25;UBERON:0002619!5.33e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.91e-11;19!UBERON:0006925;3.91e-11;19!UBERON:0002368;1.01e-09;33!UBERON:0000949;2.99e-09;43!UBERON:0003296;9.36e-09;4!UBERON:0010133;9.36e-09;4!UBERON:0000007;1.50e-08;2!UBERON:0002423;4.04e-08;25!UBERON:0002365;5.88e-08;31!UBERON:0002330;5.88e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000949,9.83e-13,45;UBERON:0002107,3.42e-11,19;UBERON:0006925,3.42e-11,19;UBERON:0008836,3.42e-11,19;UBERON:0002368,1.99e-10,35;UBERON:0007499,3.75e-10,25;UBERON:0009856,1.07e-09,26;UBERON:0008835,1.80e-09,22;UBERON:0003894,1.80e-09,22;UBERON:0009854,5.37e-09,23;UBERON:0003296,6.88e-09,4;UBERON:0010133,6.88e-09,4;UBERON:0000007,1.54e-08,2;UBERON:0009497,3.66e-08,25;UBERON:0000015,3.66e-08,25;UBERON:0002423,3.66e-08,25;UBERON:0006235,3.66e-08,25;UBERON:0004161,3.66e-08,25;UBERON:0002365,4.98e-08,31;UBERON:0002330,4.98e-08,31;UBERON:0002530,1.22e-07,59;UBERON:0011216,3.11e-07,223;UBERON:0005172,5.70e-07,54;UBERON:0005173,5.70e-07,54 | |||
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| |||
|short_description=p4@MPV17L | |||
}} |
Revision as of 09:21, 11 September 2013
Short description: | p4@MPV17L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MPV17L_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 39bp_to_ENST00000287594, ENST00000396385, NM_001128423, NM_173803, uc002ddm.2, uc002ddn.2_5end |
EntrezGene: | MPV17L |
HGNC: | 26827 |
UniProt: | Q2QL34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.72e-14 | 12 |
endodermal cell | 4.19e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
endocrine system | 9.83e-13 | 45 |
liver | 3.42e-11 | 19 |
digestive gland | 3.42e-11 | 19 |
liver bud | 3.42e-11 | 19 |
endocrine gland | 1.99e-10 | 35 |
epithelial sac | 3.75e-10 | 25 |
sac | 1.07e-09 | 26 |
hepatic diverticulum | 1.80e-09 | 22 |
liver primordium | 1.80e-09 | 22 |
digestive tract diverticulum | 5.37e-09 | 23 |
gland of diencephalon | 6.88e-09 | 4 |
neuroendocrine gland | 6.88e-09 | 4 |
pituitary gland | 1.54e-08 | 2 |
epithelium of foregut-midgut junction | 3.66e-08 | 25 |
anatomical boundary | 3.66e-08 | 25 |
hepatobiliary system | 3.66e-08 | 25 |
foregut-midgut junction | 3.66e-08 | 25 |
septum transversum | 3.66e-08 | 25 |
exocrine gland | 4.98e-08 | 31 |
exocrine system | 4.98e-08 | 31 |
gland | 1.22e-07 | 59 |
organ system subdivision | 3.11e-07 | 223 |
abdomen element | 5.70e-07 | 54 |
abdominal segment element | 5.70e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.81e-09 | 106 |
cell type cancer | 4.63e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.