FFCP PHASE1:Hg19::chr17:42143963..42144057,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=124801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26407 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=43bp_to_uc010wit.1_5end | |||
|description=CAGE_peak_1_at_LSM12_5end | |||
|id=chr17:42143963..42144057,- | |||
|ontology_enrichment_celltype=CL:0000066!1.07e-12!254;CL:0002321!1.19e-12!248;CL:0000220!2.66e-12!246;CL:0000548!1.21e-11!679;CL:0000004!1.21e-11!679;CL:0000255!1.21e-11!679;CL:0000012!1.20e-10!682;CL:0000222!6.23e-09!119;CL:0000055!2.04e-08!180;CL:0000076!4.84e-07!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.34e-13,253;CL:0002321,9.74e-13,250;CL:0000222,5.57e-09,121;CL:0000076,5.90e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.55e-16!235;DOID:14566!4.31e-16!239;DOID:0050687!1.19e-11!143;DOID:305!2.07e-07!106;DOID:3095!4.95e-07!22;DOID:2994!4.95e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.29e-07;22!DOID:2994;5.29e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.55e-16,235;DOID:14566,4.31e-16,239;DOID:0050687,1.19e-11,143;DOID:305,2.07e-07,106;DOID:3095,4.95e-07,22;DOID:2994,4.95e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0003104!4.99e-11!238;UBERON:0009142!4.99e-11!238;UBERON:0002100!6.77e-11!216;UBERON:0005256!1.21e-10!143;UBERON:0005177!4.88e-10!107;UBERON:0000466!1.78e-09!126;UBERON:0003914!6.20e-08!118;UBERON:0000490!2.19e-07!138;UBERON:0000464!3.92e-07!104;UBERON:0000119!8.93e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.20e-07;30!UBERON:0001008;4.20e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.50e-11,199;UBERON:0005177,5.69e-11,101;UBERON:0003104,1.85e-09,160;UBERON:0009142,1.85e-09,160;UBERON:0005256,5.65e-09,122;UBERON:0000490,1.12e-08,148;UBERON:0003914,3.49e-08,117;UBERON:0007503,3.25e-07,78;UBERON:0005172,9.10e-07,54;UBERON:0005173,9.10e-07,54 | |||
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| |||
|short_description=p1@LSM12 | |||
}} |
Revision as of 13:51, 11 September 2013
Short description: | p1@LSM12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LSM12_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_uc010wit.1_5end |
EntrezGene: | LSM12 |
HGNC: | 26407 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.34e-13 | 253 |
embryonic cell | 9.74e-13 | 250 |
mesodermal cell | 5.57e-09 | 121 |
squamous epithelial cell | 5.90e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.50e-11 | 199 |
trunk region element | 5.69e-11 | 101 |
mesenchyme | 1.85e-09 | 160 |
entire embryonic mesenchyme | 1.85e-09 | 160 |
trunk mesenchyme | 5.65e-09 | 122 |
unilaminar epithelium | 1.12e-08 | 148 |
epithelial tube | 3.49e-08 | 117 |
epithelial vesicle | 3.25e-07 | 78 |
abdomen element | 9.10e-07 | 54 |
abdominal segment element | 9.10e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.55e-16 | 235 |
disease of cellular proliferation | 4.31e-16 | 239 |
cell type cancer | 1.19e-11 | 143 |
carcinoma | 2.07e-07 | 106 |
germ cell and embryonal cancer | 4.95e-07 | 22 |
germ cell cancer | 4.95e-07 | 22 |
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