FFCP PHASE1:Hg19::chr17:7919436..7919461,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:7919436..7919461,+|id=chr17:7919436..7919461,+|ontology_enrichment_celltype=CL:0002076!3.97e-17!43;CL:0002368!2.42e-10!13;CL:0000223!8.60e-10!59;CL:0002251!1.01e-08!21;CL:0000066!2.00e-07!254|ontology_enrichment_celltype_v019=CL:0002621;1.78e-18;3!CL:0002076;1.01e-14;42!CL:0000575;2.64e-13;2!CL:0002368;1.36e-11;13!CL:0002159;1.29e-10;14!CL:0002166;6.72e-09;3!CL:0000307;6.72e-09;3!CL:0002251;2.08e-07;20!CL:0002252;2.74e-07;1|ontology_enrichment_celltype_v019_2=CL:0002621,1.13e-18,3;CL:0002076,1.55e-15,42;CL:0000575,1.51e-13,2;CL:0002368,1.65e-11,13;CL:0002159,1.02e-10,14;CL:0000223,1.08e-10,58;CL:0002166,5.51e-09,3;CL:0000068,8.57e-09,3;CL:0000069,8.57e-09,3;CL:0000307,8.57e-09,3;CL:0000377,8.57e-09,3;CL:0002251,1.81e-07,20;CL:0002252,2.35e-07,1|ontology_enrichment_development_v019=CL:0000377;6.72e-09;3!UBERON:0009143;1.07e-07;1!CL:0000223;2.04e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!6.09e-14!169;UBERON:0000925!6.09e-14!169;UBERON:0006595!6.09e-14!169;UBERON:0001007!3.60e-11!155;UBERON:0001555!3.60e-11!155;UBERON:0007026!3.60e-11!155;UBERON:0004921!1.65e-09!129;UBERON:0004185!1.65e-09!129;UBERON:0001004!2.70e-09!72;UBERON:0000077!1.52e-07!130;UBERON:0000065!2.50e-07!53;UBERON:0000161!6.69e-07!35;UBERON:0007023!7.69e-07!115|ontology_enrichment_uberon_v019=UBERON:0001949;1.78e-18;3!UBERON:0003929;3.62e-14;7!UBERON:0003350;2.04e-12;8!UBERON:0001043;3.66e-09;3!UBERON:0000486;2.64e-08;12!UBERON:0001828;3.03e-07;8!UBERON:0000964;4.48e-07;4!UBERON:0010409;4.48e-07;4!UBERON:0001708;7.05e-07;4!UBERON:0008895;7.05e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.13e-18,3;UBERON:0003350,1.64e-12,8;UBERON:0001043,3.67e-09,3;UBERON:0009143,3.67e-09,3;UBERON:0004119,1.41e-08,160;UBERON:0000925,1.41e-08,160;UBERON:0006595,1.41e-08,160;UBERON:0001828,2.57e-07,8;UBERON:0000964,3.41e-07,4;UBERON:0010409,3.41e-07,4;UBERON:0004348,3.41e-07,4;UBERON:0005427,3.41e-07,4;UBERON:0001708,6.07e-07,4;UBERON:0008895,6.07e-07,4|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,2.79120467188971,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.90361775633475,0.739508020333575,0,0,0,0,0.200544447470142,0.434021741431704,1.56740831967947,0.971680998056939,0.77272670290256,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.22465726229299,0.750884464207532,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,2.5500670180478,1.85392221392215,0,0.522389211897802,0,0.238490624305342,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.36373060295417,1.14721838155602,0.243947412259191,0.265059536642971,0.929551542956147,0.518305275076852,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,4.42758378755209,0,1.20725313949488,0,0.100528972411631,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,1.17587489739202,1.84307626415102,0.0895585227028483,0.581267877027924,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0.791951872933429,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,0.40101294060657,0.920809889358963,0,0,0,0,0.539107359730903,0,0,0.73886140225013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0.15350367472613,0,0.537101224341368,0.145016693914229,0,0,2.14870389969272,0.960950336825531,2.16941611240793,1.51736671283325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,1.25088746543166,0.670302275535787,1.08890984861323,0.470719003883896,0.43050537267123,3.36942951335251,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55507742614196,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0.185536196323703,0,0,0.349839999984783,0,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.384751292518985,0,0,0.0897576444097721,0.54323685961004,0,0.0915975934018623,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:7919436..7919461,+ | |||
|id=chr17:7919436..7919461,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.97e-17!43;CL:0002368!2.42e-10!13;CL:0000223!8.60e-10!59;CL:0002251!1.01e-08!21;CL:0000066!2.00e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.78e-18;3!CL:0002076;1.01e-14;42!CL:0000575;2.64e-13;2!CL:0002368;1.36e-11;13!CL:0002159;1.29e-10;14!CL:0002166;6.72e-09;3!CL:0000307;6.72e-09;3!CL:0002251;2.08e-07;20!CL:0002252;2.74e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.13e-18,3;CL:0002076,1.55e-15,42;CL:0000575,1.51e-13,2;CL:0002368,1.65e-11,13;CL:0002159,1.02e-10,14;CL:0000223,1.08e-10,58;CL:0002166,5.51e-09,3;CL:0000068,8.57e-09,3;CL:0000069,8.57e-09,3;CL:0000307,8.57e-09,3;CL:0000377,8.57e-09,3;CL:0002251,1.81e-07,20;CL:0002252,2.35e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;6.72e-09;3!UBERON:0009143;1.07e-07;1!CL:0000223;2.04e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.09e-14!169;UBERON:0000925!6.09e-14!169;UBERON:0006595!6.09e-14!169;UBERON:0001007!3.60e-11!155;UBERON:0001555!3.60e-11!155;UBERON:0007026!3.60e-11!155;UBERON:0004921!1.65e-09!129;UBERON:0004185!1.65e-09!129;UBERON:0001004!2.70e-09!72;UBERON:0000077!1.52e-07!130;UBERON:0000065!2.50e-07!53;UBERON:0000161!6.69e-07!35;UBERON:0007023!7.69e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.78e-18;3!UBERON:0003929;3.62e-14;7!UBERON:0003350;2.04e-12;8!UBERON:0001043;3.66e-09;3!UBERON:0000486;2.64e-08;12!UBERON:0001828;3.03e-07;8!UBERON:0000964;4.48e-07;4!UBERON:0010409;4.48e-07;4!UBERON:0001708;7.05e-07;4!UBERON:0008895;7.05e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.13e-18,3;UBERON:0003350,1.64e-12,8;UBERON:0001043,3.67e-09,3;UBERON:0009143,3.67e-09,3;UBERON:0004119,1.41e-08,160;UBERON:0000925,1.41e-08,160;UBERON:0006595,1.41e-08,160;UBERON:0001828,2.57e-07,8;UBERON:0000964,3.41e-07,4;UBERON:0010409,3.41e-07,4;UBERON:0004348,3.41e-07,4;UBERON:0005427,3.41e-07,4;UBERON:0001708,6.07e-07,4;UBERON:0008895,6.07e-07,4 | |||
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|short_description=p@chr17:7919436..7919461,+ | |||
}} |
Revision as of 16:23, 11 September 2013
Short description: | p@chr17:7919436..7919461, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:7919436..7919461, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.13e-18 | 3 |
endo-epithelial cell | 1.55e-15 | 42 |
corneal epithelial cell | 1.51e-13 | 2 |
respiratory epithelial cell | 1.65e-11 | 13 |
general ecto-epithelial cell | 1.02e-10 | 14 |
endodermal cell | 1.08e-10 | 58 |
epithelial cell of Malassez | 5.51e-09 | 3 |
duct epithelial cell | 8.57e-09 | 3 |
branched duct epithelial cell | 8.57e-09 | 3 |
tracheal epithelial cell | 8.57e-09 | 3 |
tracheoblast | 8.57e-09 | 3 |
epithelial cell of alimentary canal | 1.81e-07 | 20 |
epithelial cell of esophagus | 2.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.13e-18 | 3 |
epithelium of mucosa | 1.64e-12 | 8 |
esophagus | 3.67e-09 | 3 |
esophageal region | 3.67e-09 | 3 |
endoderm-derived structure | 1.41e-08 | 160 |
endoderm | 1.41e-08 | 160 |
presumptive endoderm | 1.41e-08 | 160 |
gingiva | 2.57e-07 | 8 |
cornea | 3.41e-07 | 4 |
eye surface | 3.41e-07 | 4 |
optic eminence | 3.41e-07 | 4 |
corneal primordium | 3.41e-07 | 4 |
jaw skeleton | 6.07e-07 | 4 |
splanchnocranium | 6.07e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.