FFCP PHASE1:Hg19::chr18:29077951..29077964,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1829|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3049|TSSclassifier=S|UniProt=Q14126|association_with_transcript=-62bp_to_ENST00000261590,NM_001943,uc002kwu.3_5end|coexpression_cluster_id=C2456|description=CAGE_peak_4_at_DSG2_5end|id=chr18:29077951..29077964,+|ontology_enrichment_celltype=CL:0000066!4.47e-19!254;CL:0000223!8.57e-13!59;CL:0002076!7.63e-10!43;CL:0000039!1.12e-08!7;CL:0000586!1.12e-08!7;CL:0002251!8.22e-07!21|ontology_enrichment_celltype_v019=CL:0000039;4.36e-28;7!CL:0000586;4.36e-28;7!CL:0000182;6.12e-11;12!CL:0002322;1.35e-10;5!CL:0000540;2.19e-09;6!CL:0000404;2.19e-09;6|ontology_enrichment_celltype_v019_2=CL:0000039,1.23e-27,7;CL:0000586,1.23e-27,7;CL:0000182,4.89e-11,12;CL:0002322,1.85e-10,5;CL:0000540,2.19e-09,6;CL:0000031,2.19e-09,6;CL:0000404,2.19e-09,6;CL:0000066,4.35e-08,253;CL:0000047,3.90e-07,8|ontology_enrichment_development_v019=UBERON:0009497;4.41e-10;13!CL:0000031;2.19e-09;6!UBERON:0004161;6.24e-08;11|ontology_enrichment_disease=DOID:305!7.32e-16!106;DOID:0050687!2.96e-09!143|ontology_enrichment_disease_v019=DOID:3095;1.98e-11;22!DOID:2994;1.98e-11;22!DOID:1799;3.83e-07;1!DOID:10165;3.83e-07;1!DOID:1798;3.83e-07;1|ontology_enrichment_disease_v019_2=DOID:3095,2.68e-11,22;DOID:2994,2.68e-11,22;DOID:305,1.26e-09,106;DOID:0050687,1.42e-09,143;DOID:1799,4.18e-07,1;DOID:10165,4.18e-07,1;DOID:1798,4.18e-07,1|ontology_enrichment_uberon=UBERON:0004119!1.29e-11!169;UBERON:0000925!1.29e-11!169;UBERON:0006595!1.29e-11!169;UBERON:0001007!1.16e-09!155;UBERON:0001555!1.16e-09!155;UBERON:0007026!1.16e-09!155;UBERON:0005911!3.16e-09!82;UBERON:0001048!4.44e-09!168;UBERON:0004921!1.67e-08!129;UBERON:0004185!1.67e-08!129;UBERON:0000466!7.22e-08!126;UBERON:0003929!2.11e-07!54;UBERON:0000077!6.18e-07!130;UBERON:0000481!9.74e-07!347|ontology_enrichment_uberon_v019=UBERON:0002423;1.39e-09;25!UBERON:0002107;8.03e-07;19!UBERON:0006925;8.03e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0008835,4.03e-11,22;UBERON:0003894,4.03e-11,22;UBERON:0009854,1.34e-10,23;UBERON:0007499,1.11e-09,25;UBERON:0009497,1.11e-09,25;UBERON:0000015,1.11e-09,25;UBERON:0002423,1.11e-09,25;UBERON:0006235,1.11e-09,25;UBERON:0004161,1.11e-09,25;UBERON:0009856,2.82e-09,26;UBERON:0002107,7.01e-07,19;UBERON:0006925,7.01e-07,19;UBERON:0008836,7.01e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,1.31064823278103,0.527533956456907,0,0.662794751455832,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.376627918784408,0.382067028739756,0.57470412614962,0.393553906568396,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.665188192387692,0.87834785693126,0.261958150995425,0.364295288292542,0.370784442784429,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.286804595389004,1.09776335516636,0.662648841607426,2.09149097165133,0.621966330092223,2.77552935963191,2.55484151353081,0,0,0,0,0,0,0.337169380156203,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.614942192715568,0.686271241194102,0.768251997860379,0,0.201057944823262,0.648119116109707,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0,0,0,0,0,0,1.84780341018745,0.850650583454319,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,0.460404944679482,0,0,0,0.451199612907412,2.54150612444569,0.784349769176855,1.46139224653261,1.05551628892876,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.170453254832202,0,0.661139661443912,0.768760269460425,0.638063562472921,1.6185244936888,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0.211107635297664,0,0,0,0.769776901804097,0,0,0.470719003883896,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.586032717087576,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,2.26739473068848,0,0.123084805461069,0,1.43789361835723,0,0,0.197286811273867,0,0,0.969332746095218,0,0,0,0,0,0.227586896570999,0,1.18193840883968,0,0,0.347249989866585,0,0,0,0,0.29554761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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3049 | |||
|TSSclassifier=S | |||
|UniProt=Q14126 | |||
|association_with_transcript=-62bp_to_ENST00000261590,NM_001943,uc002kwu.3_5end | |||
|coexpression_cluster_id=C2456 | |||
|description=CAGE_peak_4_at_DSG2_5end | |||
|id=chr18:29077951..29077964,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.47e-19!254;CL:0000223!8.57e-13!59;CL:0002076!7.63e-10!43;CL:0000039!1.12e-08!7;CL:0000586!1.12e-08!7;CL:0002251!8.22e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.36e-28;7!CL:0000586;4.36e-28;7!CL:0000182;6.12e-11;12!CL:0002322;1.35e-10;5!CL:0000540;2.19e-09;6!CL:0000404;2.19e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.23e-27,7;CL:0000586,1.23e-27,7;CL:0000182,4.89e-11,12;CL:0002322,1.85e-10,5;CL:0000540,2.19e-09,6;CL:0000031,2.19e-09,6;CL:0000404,2.19e-09,6;CL:0000066,4.35e-08,253;CL:0000047,3.90e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009497;4.41e-10;13!CL:0000031;2.19e-09;6!UBERON:0004161;6.24e-08;11 | |||
|ontology_enrichment_disease=DOID:305!7.32e-16!106;DOID:0050687!2.96e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.98e-11;22!DOID:2994;1.98e-11;22!DOID:1799;3.83e-07;1!DOID:10165;3.83e-07;1!DOID:1798;3.83e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.68e-11,22;DOID:2994,2.68e-11,22;DOID:305,1.26e-09,106;DOID:0050687,1.42e-09,143;DOID:1799,4.18e-07,1;DOID:10165,4.18e-07,1;DOID:1798,4.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.29e-11!169;UBERON:0000925!1.29e-11!169;UBERON:0006595!1.29e-11!169;UBERON:0001007!1.16e-09!155;UBERON:0001555!1.16e-09!155;UBERON:0007026!1.16e-09!155;UBERON:0005911!3.16e-09!82;UBERON:0001048!4.44e-09!168;UBERON:0004921!1.67e-08!129;UBERON:0004185!1.67e-08!129;UBERON:0000466!7.22e-08!126;UBERON:0003929!2.11e-07!54;UBERON:0000077!6.18e-07!130;UBERON:0000481!9.74e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.39e-09;25!UBERON:0002107;8.03e-07;19!UBERON:0006925;8.03e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,4.03e-11,22;UBERON:0003894,4.03e-11,22;UBERON:0009854,1.34e-10,23;UBERON:0007499,1.11e-09,25;UBERON:0009497,1.11e-09,25;UBERON:0000015,1.11e-09,25;UBERON:0002423,1.11e-09,25;UBERON:0006235,1.11e-09,25;UBERON:0004161,1.11e-09,25;UBERON:0009856,2.82e-09,26;UBERON:0002107,7.01e-07,19;UBERON:0006925,7.01e-07,19;UBERON:0008836,7.01e-07,19 | |||
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| |||
|short_description=p4@DSG2 | |||
}} |
Revision as of 17:12, 11 September 2013
Short description: | p4@DSG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_DSG2_5end |
Coexpression cluster: | C2456_hepatoblastoma_iPS_choriocarcinoma_colon_HES3GFP_argyrophil_H9 |
Association with transcript: | -62bp_to_ENST00000261590, NM_001943, uc002kwu.3_5end |
EntrezGene: | DSG2 |
HGNC: | 3049 |
UniProt: | Q14126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.23e-27 | 7 |
germ cell | 1.23e-27 | 7 |
hepatocyte | 4.89e-11 | 12 |
embryonic stem cell | 1.85e-10 | 5 |
neuron | 2.19e-09 | 6 |
neuroblast | 2.19e-09 | 6 |
electrically signaling cell | 2.19e-09 | 6 |
epithelial cell | 4.35e-08 | 253 |
neuronal stem cell | 3.90e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 4.03e-11 | 22 |
liver primordium | 4.03e-11 | 22 |
digestive tract diverticulum | 1.34e-10 | 23 |
epithelial sac | 1.11e-09 | 25 |
epithelium of foregut-midgut junction | 1.11e-09 | 25 |
anatomical boundary | 1.11e-09 | 25 |
hepatobiliary system | 1.11e-09 | 25 |
foregut-midgut junction | 1.11e-09 | 25 |
septum transversum | 1.11e-09 | 25 |
sac | 2.82e-09 | 26 |
liver | 7.01e-07 | 19 |
digestive gland | 7.01e-07 | 19 |
liver bud | 7.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.68e-11 | 22 |
germ cell cancer | 2.68e-11 | 22 |
carcinoma | 1.26e-09 | 106 |
cell type cancer | 1.42e-09 | 143 |
islet cell tumor | 4.18e-07 | 1 |
endocrine pancreas cancer | 4.18e-07 | 1 |
pancreatic endocrine carcinoma | 4.18e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.