FFCP PHASE1:Hg19::chr19:10654561..10654600,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84971 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20789 | |||
|TSSclassifier=S | |||
|UniProt=Q86TL0 | |||
|association_with_transcript=0bp_to_ENST00000309469,uc010xlg.1_5end | |||
|description=CAGE_peak_1_at_ATG4D_5end | |||
|id=chr19:10654561..10654600,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.51e-09!18;CL:0000789!1.51e-09!18;CL:0002420!1.51e-09!18;CL:0002419!1.51e-09!18;CL:0000790!1.51e-09!18;CL:0000084!3.63e-08!25;CL:0000827!3.63e-08!25;CL:0000988!1.03e-07!182;CL:0000037!1.83e-07!172;CL:0000566!1.83e-07!172;CL:0000738!4.33e-07!140;CL:0000542!8.33e-07!53;CL:0000051!8.33e-07!53;CL:0000625!9.46e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.42e-09;18!CL:0000789;1.42e-09;18!CL:0002419;1.42e-09;18!CL:0000084;3.88e-08;25!CL:0000625;8.86e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.51e-09,18;CL:0000789,1.51e-09,18;CL:0002420,1.51e-09,18;CL:0002419,1.51e-09,18;CL:0000790,1.51e-09,18;CL:0000988,1.44e-08,177;CL:0000084,3.63e-08,25;CL:0000827,3.63e-08,25;CL:0000037,4.26e-08,168;CL:0000738,8.86e-08,136;CL:0000542,8.33e-07,53;CL:0000051,8.33e-07,53;CL:0000625,9.46e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.42e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@ATG4D | |||
}} |
Revision as of 18:34, 11 September 2013
Short description: | p1@ATG4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ATG4D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309469, uc010xlg.1_5end |
EntrezGene: | ATG4D |
HGNC: | 20789 |
UniProt: | Q86TL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.51e-09 | 18 |
alpha-beta T cell | 1.51e-09 | 18 |
immature T cell | 1.51e-09 | 18 |
mature T cell | 1.51e-09 | 18 |
immature alpha-beta T cell | 1.51e-09 | 18 |
hematopoietic cell | 1.44e-08 | 177 |
T cell | 3.63e-08 | 25 |
pro-T cell | 3.63e-08 | 25 |
hematopoietic stem cell | 4.26e-08 | 168 |
leukocyte | 8.86e-08 | 136 |
lymphocyte | 8.33e-07 | 53 |
common lymphoid progenitor | 8.33e-07 | 53 |
CD8-positive, alpha-beta T cell | 9.46e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.