FFCP PHASE1:Hg19::chr1:153517273..153517295,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6275|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10494|TSSclassifier=N|UniProt=|association_with_transcript=277bp_to_ENST00000481009_5end|coexpression_cluster_id=C255|description=CAGE_peak_5_at_S100A4_5end|id=chr1:153517273..153517295,-|ontology_enrichment_celltype=CL:0000860!2.52e-13!45;CL:0002057!2.98e-12!42;CL:0002009!3.37e-12!65;CL:0000557!1.23e-11!71;CL:0002194!2.09e-11!63;CL:0000576!2.09e-11!63;CL:0000040!2.09e-11!63;CL:0000559!2.09e-11!63;CL:0000839!1.63e-10!70;CL:0000766!3.16e-09!76;CL:0002320!3.47e-07!365;CL:0000134!5.44e-07!358|ontology_enrichment_celltype_v019=CL:0000135;1.15e-12;3!CL:0000388;1.15e-12;3!CL:0000499;6.84e-12;28!CL:0002149;1.90e-10;6!CL:0002255;1.90e-10;6!CL:0002559;3.08e-07;5|ontology_enrichment_celltype_v019_2=CL:0000135,5.44e-13,3;CL:0000388,5.44e-13,3;CL:0000499,3.71e-12,28;CL:0002149,1.33e-10,6;CL:0002255,1.33e-10,6;CL:0002559,2.23e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3001;1.90e-10;6!DOID:3451;2.06e-08;2!DOID:4159;2.06e-08;2!DOID:0060122;2.06e-08;2|ontology_enrichment_disease_v019_2=DOID:3001,1.33e-10,6;DOID:3451,5.45e-08,2;DOID:4159,5.45e-08,2;DOID:0060122,5.45e-08,2|ontology_enrichment_uberon=UBERON:0001474!5.65e-11!86;UBERON:0002371!7.13e-11!80;UBERON:0004765!6.73e-10!101;UBERON:0001434!6.73e-10!101;UBERON:0002390!9.53e-08!102;UBERON:0003061!9.53e-08!102;UBERON:0002384!1.62e-07!375;UBERON:0001737!2.55e-07!9|ontology_enrichment_uberon_v019=UBERON:0007846;1.15e-12;3!UBERON:0000043;1.15e-12;3!UBERON:0007845;1.15e-12;3!UBERON:0002073;3.08e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.44e-13,3;UBERON:0000043,5.44e-13,3;UBERON:0007845,5.44e-13,3;UBERON:0000995,3.36e-08,21;UBERON:0005795,8.83e-08,22;UBERON:0003975,8.83e-08,22;UBERON:0002073,2.23e-07,5;UBERON:0005086,2.23e-07,5|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0.77272670290256,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.575384784644301,0.768482119587302,0.709446689665756,1.03423704220986,1.29096936716765,1.35426486594342,0,0.545812300115692,0.449446968890169,0.306083892370903,0,0.639337125799041,1.31940520074686,0.199463657621632,1.27867425159808,0,0.56738522469114,1.24564449799115,0.502497330513487,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0.632924774881769,0.633765858935825,0.850417199860174,0,0.112328631146495,0.600707571366025,0,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0.263384084775077,0,0.786021525498329,0.616804496998528,0.501559486172034,0,0,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0.25618263945135,0.260118695119756,0.164437904603676,0.552700035571697,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,1.11235332835329,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936480230490962,0,0.298897361103602,0.469737994575059,0.485618833104395,0.421352420106746,0.408308342509787,0.368502951935304,0.516628905878827,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0.919463387397059,0,0,0.179389635688862,0.213557388818567,0,0.600182192168805,0.412210116953756,0,0.744467425326359,0.168776332241266,0.292311015483596,0.504867548488229,0.460249493211497,0.161646056818812,0.355009592516614,0.302256294682921,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0,1.44375896333917,1.18306800039844,0.842923450390509,0.723033089650446,1.43382164552112,0.435758888184812,0.474541238222193,1.34831308160164,0.588664395376038,0.38474715694639,0,0,0,2.94017422771084,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,1.42636905040718,0.434343920002738,0.205476322550383,0,0,0,0,0.256686072559497,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0.500170521059677,0,0.415941723061614,1.24900292158013,1.10391690523754,1.05427273493442,0.601892199455438,0,2.0694614258501,0.664225598535437,0.184369168541703,0.434418072340414,0,1.71571711905428,0,0,0.106727557803444,0.606255142892519,3.32870879020994,1.81434175997808,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0.710246901252508,0,0,1.04589340613963,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0.165018999841176,0,0,0,0.48335359146061,0.308097234229289,0.307007349452259,0.55134628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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6275 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10494 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=277bp_to_ENST00000481009_5end | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_5_at_S100A4_5end | |||
|id=chr1:153517273..153517295,- | |||
|ontology_enrichment_celltype=CL:0000860!2.52e-13!45;CL:0002057!2.98e-12!42;CL:0002009!3.37e-12!65;CL:0000557!1.23e-11!71;CL:0002194!2.09e-11!63;CL:0000576!2.09e-11!63;CL:0000040!2.09e-11!63;CL:0000559!2.09e-11!63;CL:0000839!1.63e-10!70;CL:0000766!3.16e-09!76;CL:0002320!3.47e-07!365;CL:0000134!5.44e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.15e-12;3!CL:0000388;1.15e-12;3!CL:0000499;6.84e-12;28!CL:0002149;1.90e-10;6!CL:0002255;1.90e-10;6!CL:0002559;3.08e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,5.44e-13,3;CL:0000388,5.44e-13,3;CL:0000499,3.71e-12,28;CL:0002149,1.33e-10,6;CL:0002255,1.33e-10,6;CL:0002559,2.23e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;1.90e-10;6!DOID:3451;2.06e-08;2!DOID:4159;2.06e-08;2!DOID:0060122;2.06e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.33e-10,6;DOID:3451,5.45e-08,2;DOID:4159,5.45e-08,2;DOID:0060122,5.45e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001474!5.65e-11!86;UBERON:0002371!7.13e-11!80;UBERON:0004765!6.73e-10!101;UBERON:0001434!6.73e-10!101;UBERON:0002390!9.53e-08!102;UBERON:0003061!9.53e-08!102;UBERON:0002384!1.62e-07!375;UBERON:0001737!2.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.15e-12;3!UBERON:0000043;1.15e-12;3!UBERON:0007845;1.15e-12;3!UBERON:0002073;3.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.44e-13,3;UBERON:0000043,5.44e-13,3;UBERON:0007845,5.44e-13,3;UBERON:0000995,3.36e-08,21;UBERON:0005795,8.83e-08,22;UBERON:0003975,8.83e-08,22;UBERON:0002073,2.23e-07,5;UBERON:0005086,2.23e-07,5 | |||
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| |||
|short_description=p5@S100A4 | |||
}} |
Revision as of 00:30, 12 September 2013
Short description: | p5@S100A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_S100A4_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 277bp_to_ENST00000481009_5end |
EntrezGene: | S100A4 |
HGNC: | 10494 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 5.44e-13 | 3 |
tendon cell | 5.44e-13 | 3 |
stromal cell | 3.71e-12 | 28 |
epithelial cell of uterus | 1.33e-10 | 6 |
stromal cell of endometrium | 1.33e-10 | 6 |
hair follicle cell | 2.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 5.44e-13 | 3 |
tendon | 5.44e-13 | 3 |
regular connective tissue | 5.44e-13 | 3 |
uterus | 3.36e-08 | 21 |
embryonic uterus | 8.83e-08 | 22 |
internal female genitalia | 8.83e-08 | 22 |
hair follicle | 2.23e-07 | 5 |
hair follicle placode | 2.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.33e-10 | 6 |
skin carcinoma | 5.45e-08 | 2 |
skin cancer | 5.45e-08 | 2 |
integumentary system cancer | 5.45e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.