FFCP PHASE1:Hg19::chr1:186116540..186116557,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C90|description=CAGE_peak_at_chr1:186116540..186116557,+|id=chr1:186116540..186116557,+|ontology_enrichment_celltype=CL:0002570!1.22e-07!8|ontology_enrichment_celltype_v019=CL:0002174;7.05e-34;1!CL:0000501;7.05e-34;1!CL:0000174;2.89e-12;3!CL:0000333;5.92e-08;5|ontology_enrichment_celltype_v019_2=CL:0002174,5.05e-34,1;CL:0000501,5.05e-34,1;CL:0000174,2.59e-12,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1909!2.33e-08!2;DOID:17!6.78e-07!5;DOID:450!6.78e-07!5;DOID:66!6.78e-07!5;DOID:423!6.78e-07!5;DOID:0080000!6.78e-07!5;DOID:11722!6.78e-07!5|ontology_enrichment_disease_v019=DOID:171;4.61e-53;10!DOID:3095;1.43e-24;22!DOID:2994;1.43e-24;22!DOID:169;7.80e-07;6|ontology_enrichment_disease_v019_2=DOID:171,5.27e-53,10;DOID:3095,1.51e-24,22;DOID:2994,1.51e-24,22;DOID:169,7.58e-07,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002346;2.28e-74;4!UBERON:0000923;2.28e-74;4!UBERON:0010316;2.28e-74;4!UBERON:0005291;2.28e-74;4!UBERON:0002050;9.96e-60;5!UBERON:0005423;9.96e-60;5!UBERON:0000013;5.92e-08;5!UBERON:0002410;5.92e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.73e-08,5;UBERON:0002410,5.73e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0.622422070799533,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0,0,0.506328996723799,0.0974370051611986,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0.39961921916426,0,0.343609788497747,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,1.28929632425987,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.454947352624943,0.285465333544967,0,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45985072082972,0,1.01839517972415,7.01497236335553,3.34626563499306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.665320713092027,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p@chr1:186116540..186116557,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr1:186116540..186116557,+ | |||
|id=chr1:186116540..186116557,+ | |||
|ontology_enrichment_celltype=CL:0002570!1.22e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002174;7.05e-34;1!CL:0000501;7.05e-34;1!CL:0000174;2.89e-12;3!CL:0000333;5.92e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,5.05e-34,1;CL:0000501,5.05e-34,1;CL:0000174,2.59e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!2.33e-08!2;DOID:17!6.78e-07!5;DOID:450!6.78e-07!5;DOID:66!6.78e-07!5;DOID:423!6.78e-07!5;DOID:0080000!6.78e-07!5;DOID:11722!6.78e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:171;4.61e-53;10!DOID:3095;1.43e-24;22!DOID:2994;1.43e-24;22!DOID:169;7.80e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.27e-53,10;DOID:3095,1.51e-24,22;DOID:2994,1.51e-24,22;DOID:169,7.58e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.28e-74;4!UBERON:0000923;2.28e-74;4!UBERON:0010316;2.28e-74;4!UBERON:0005291;2.28e-74;4!UBERON:0002050;9.96e-60;5!UBERON:0005423;9.96e-60;5!UBERON:0000013;5.92e-08;5!UBERON:0002410;5.92e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.73e-08,5;UBERON:0002410,5.73e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0.622422070799533,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0,0,0.506328996723799,0.0974370051611986,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0.39961921916426,0,0.343609788497747,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,1.28929632425987,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.454947352624943,0.285465333544967,0,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45985072082972,0,1.01839517972415,7.01497236335553,3.34626563499306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.665320713092027,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:186116540..186116557,+ | |||
}} | |||
Revision as of 02:21, 12 September 2013
| Short description: | p@chr1:186116540..186116557, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr1:186116540..186116557, + |
| Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| follicular cell of ovary | 5.05e-34 | 1 |
| granulosa cell | 5.05e-34 | 1 |
| steroid hormone secreting cell | 2.59e-12 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| sympathetic nervous system | 5.73e-08 | 5 |
| autonomic nervous system | 5.73e-08 | 5 |
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 5.27e-53 | 10 |
| germ cell and embryonal cancer | 1.51e-24 | 22 |
| germ cell cancer | 1.51e-24 | 22 |
| neuroendocrine tumor | 7.58e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
