FFCP PHASE1:Hg19::chr1:239882842..239882850,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1131|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1952|TSSclassifier=S|UniProt=B1AN12|association_with_transcript=0bp_to_ENST00000448020_5end|coexpression_cluster_id=C24|description=CAGE_peak_22_at_CHRM3_5end|id=chr1:239882842..239882850,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;3.66e-23;3|ontology_enrichment_disease=DOID:1036!1.01e-08!8|ontology_enrichment_disease_v019=DOID:1036;1.41e-09;8|ontology_enrichment_disease_v019_2=DOID:1036,1.47e-09,8|ontology_enrichment_uberon=UBERON:0003112!1.65e-16!1;UBERON:0000032!1.65e-16!1;UBERON:0005253!1.65e-16!1;UBERON:0003128!1.65e-16!1;UBERON:0002241!1.65e-16!1;UBERON:0001703!1.65e-16!1;UBERON:0004761!1.65e-16!1;UBERON:0009617!1.65e-16!1;UBERON:0001905!3.43e-09!2;UBERON:0002757!3.43e-09!2;UBERON:0010134!3.43e-09!2;UBERON:0002784!3.43e-09!2;UBERON:0005408!3.43e-09!2;UBERON:0001899!3.43e-09!2;UBERON:0000970!1.62e-07!20;UBERON:0002104!3.49e-07!21|ontology_enrichment_uberon_v019=UBERON:0001905;3.61e-34;2!UBERON:0002757;3.61e-34;2!UBERON:0010134;3.61e-34;2!UBERON:0005408;3.61e-34;2!UBERON:0001899;3.61e-34;2!UBERON:0003296;7.35e-18;4!UBERON:0010133;7.35e-18;4!UBERON:0002784;7.35e-18;4!UBERON:0000966;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5!UBERON:0001894;8.16e-11;7|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.61e-34,2;UBERON:0002757,3.61e-34,2;UBERON:0010134,3.61e-34,2;UBERON:0005408,3.61e-34,2;UBERON:0001899,3.61e-34,2;UBERON:0003296,7.35e-18,4;UBERON:0010133,7.35e-18,4;UBERON:0002784,7.35e-18,4;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0001894,8.16e-11,7;UBERON:0006222,8.16e-11,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23138781124008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,2.69026977775059,0,0,0,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,1.92986669276972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p22@CHRM3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1952 | |||
|TSSclassifier=S | |||
|UniProt=B1AN12 | |||
|association_with_transcript=0bp_to_ENST00000448020_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_22_at_CHRM3_5end | |||
|id=chr1:239882842..239882850,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.66e-23;3 | |||
|ontology_enrichment_disease=DOID:1036!1.01e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.41e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.47e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0003112!1.65e-16!1;UBERON:0000032!1.65e-16!1;UBERON:0005253!1.65e-16!1;UBERON:0003128!1.65e-16!1;UBERON:0002241!1.65e-16!1;UBERON:0001703!1.65e-16!1;UBERON:0004761!1.65e-16!1;UBERON:0009617!1.65e-16!1;UBERON:0001905!3.43e-09!2;UBERON:0002757!3.43e-09!2;UBERON:0010134!3.43e-09!2;UBERON:0002784!3.43e-09!2;UBERON:0005408!3.43e-09!2;UBERON:0001899!3.43e-09!2;UBERON:0000970!1.62e-07!20;UBERON:0002104!3.49e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.61e-34;2!UBERON:0002757;3.61e-34;2!UBERON:0010134;3.61e-34;2!UBERON:0005408;3.61e-34;2!UBERON:0001899;3.61e-34;2!UBERON:0003296;7.35e-18;4!UBERON:0010133;7.35e-18;4!UBERON:0002784;7.35e-18;4!UBERON:0000966;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5!UBERON:0001894;8.16e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.61e-34,2;UBERON:0002757,3.61e-34,2;UBERON:0010134,3.61e-34,2;UBERON:0005408,3.61e-34,2;UBERON:0001899,3.61e-34,2;UBERON:0003296,7.35e-18,4;UBERON:0010133,7.35e-18,4;UBERON:0002784,7.35e-18,4;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0001894,8.16e-11,7;UBERON:0006222,8.16e-11,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23138781124008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,2.69026977775059,0,0,0,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,1.92986669276972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p22@CHRM3 | |||
}} |
Revision as of 04:30, 12 September 2013
Short description: | p22@CHRM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_CHRM3_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000448020_5end |
EntrezGene: | CHRM3 |
HGNC: | 1952 |
UniProt: | B1AN12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 3.61e-34 | 2 |
regional part of epithalamus | 3.61e-34 | 2 |
secretory circumventricular organ | 3.61e-34 | 2 |
circumventricular organ | 3.61e-34 | 2 |
epithalamus | 3.61e-34 | 2 |
gland of diencephalon | 7.35e-18 | 4 |
neuroendocrine gland | 7.35e-18 | 4 |
regional part of diencephalon | 7.35e-18 | 4 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
diencephalon | 8.16e-11 | 7 |
future diencephalon | 8.16e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.47e-09 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.