FFCP PHASE1:Hg19::chr2:1418171..1418194,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7173|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12015|TSSclassifier=S|UniProt=P07202,Q502Y3|association_with_transcript=0bp_to_ENST00000382198,NM_175721,NM_175722,uc010yio.1,uc010yip.1_5end|coexpression_cluster_id=C178|description=CAGE_peak_2_at_TPO_5end|id=chr2:1418171..1418194,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007123;4.05e-40;5!UBERON:0004872;2.74e-29;7|ontology_enrichment_disease=DOID:114!9.87e-26!2;DOID:178!9.73e-14!1;DOID:326!9.73e-14!1;DOID:3978!9.73e-14!1;DOID:3394!9.73e-14!1;DOID:5844!9.73e-14!1;DOID:1287!2.21e-13!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!4.26e-18!3;UBERON:0004854!4.26e-18!3;UBERON:0009034!4.26e-18!3;UBERON:0002095!4.26e-18!3;UBERON:0004782!4.26e-18!3;UBERON:0003281!4.26e-18!3;UBERON:0009664!4.26e-18!3;UBERON:0002296!4.26e-18!3;UBERON:0005602!4.26e-18!3;UBERON:0001179!4.26e-18!3;UBERON:0006293!4.26e-18!3;UBERON:0004177!7.53e-17!7;UBERON:0003112!1.25e-13!1;UBERON:0000032!1.25e-13!1;UBERON:0005253!1.25e-13!1;UBERON:0003128!1.25e-13!1;UBERON:0002241!1.25e-13!1;UBERON:0001703!1.25e-13!1;UBERON:0004761!1.25e-13!1;UBERON:0009617!1.25e-13!1;UBERON:0002046!3.72e-11!5;UBERON:0004117!3.72e-11!5;UBERON:0007689!3.72e-11!5;UBERON:0007123!3.72e-11!5;UBERON:0003091!3.72e-11!5;UBERON:0009722!6.98e-11!11;UBERON:0007690!6.98e-11!11;UBERON:0008814!4.02e-08!15;UBERON:0001875!1.36e-07!2;UBERON:0006514!1.36e-07!2;UBERON:0000341!1.45e-07!2;UBERON:0000945!2.37e-07!8;UBERON:0010039!2.37e-07!8|ontology_enrichment_uberon_v019=UBERON:0002106;1.71e-66;3!UBERON:0004177;1.81e-40;5!UBERON:0005057;1.81e-40;5!UBERON:0002046;4.05e-40;5!UBERON:0002075;4.07e-12;18!UBERON:0000077;1.98e-08;27!UBERON:0002405;1.98e-08;27!UBERON:0002390;3.37e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.71e-66,3;UBERON:0004854,1.71e-66,3;UBERON:0009034,1.71e-66,3;UBERON:0002095,1.71e-66,3;UBERON:0004782,1.71e-66,3;UBERON:0003281,1.71e-66,3;UBERON:0009664,1.71e-66,3;UBERON:0002296,1.71e-66,3;UBERON:0005602,1.71e-66,3;UBERON:0001179,1.71e-66,3;UBERON:0006293,1.71e-66,3;UBERON:0002046,4.05e-40,5;UBERON:0004117,4.05e-40,5;UBERON:0007689,4.05e-40,5;UBERON:0007123,4.05e-40,5;UBERON:0003091,4.05e-40,5;UBERON:0004177,2.74e-29,7;UBERON:0005057,2.74e-29,7;UBERON:0000945,8.65e-26,8;UBERON:0010039,8.65e-26,8;UBERON:0009722,6.17e-19,11;UBERON:0007690,6.17e-19,11;UBERON:0004457,1.33e-17,12;UBERON:0000042,1.33e-17,12;UBERON:0003887,1.33e-17,12;UBERON:0002075,4.07e-12,18;UBERON:0008814,5.09e-12,18;UBERON:0005409,1.03e-08,25;UBERON:0000077,6.44e-08,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.2326022707326,14.7608563459492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0.124149428591716,0,3.81882949668989,4.44657815708082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@TPO}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7173 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12015 | |||
|TSSclassifier=S | |||
|UniProt=P07202,Q502Y3 | |||
|association_with_transcript=0bp_to_ENST00000382198,NM_175721,NM_175722,uc010yio.1,uc010yip.1_5end | |||
|coexpression_cluster_id=C178 | |||
|description=CAGE_peak_2_at_TPO_5end | |||
|id=chr2:1418171..1418194,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.05e-40;5!UBERON:0004872;2.74e-29;7 | |||
|ontology_enrichment_disease=DOID:114!9.87e-26!2;DOID:178!9.73e-14!1;DOID:326!9.73e-14!1;DOID:3978!9.73e-14!1;DOID:3394!9.73e-14!1;DOID:5844!9.73e-14!1;DOID:1287!2.21e-13!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!4.26e-18!3;UBERON:0004854!4.26e-18!3;UBERON:0009034!4.26e-18!3;UBERON:0002095!4.26e-18!3;UBERON:0004782!4.26e-18!3;UBERON:0003281!4.26e-18!3;UBERON:0009664!4.26e-18!3;UBERON:0002296!4.26e-18!3;UBERON:0005602!4.26e-18!3;UBERON:0001179!4.26e-18!3;UBERON:0006293!4.26e-18!3;UBERON:0004177!7.53e-17!7;UBERON:0003112!1.25e-13!1;UBERON:0000032!1.25e-13!1;UBERON:0005253!1.25e-13!1;UBERON:0003128!1.25e-13!1;UBERON:0002241!1.25e-13!1;UBERON:0001703!1.25e-13!1;UBERON:0004761!1.25e-13!1;UBERON:0009617!1.25e-13!1;UBERON:0002046!3.72e-11!5;UBERON:0004117!3.72e-11!5;UBERON:0007689!3.72e-11!5;UBERON:0007123!3.72e-11!5;UBERON:0003091!3.72e-11!5;UBERON:0009722!6.98e-11!11;UBERON:0007690!6.98e-11!11;UBERON:0008814!4.02e-08!15;UBERON:0001875!1.36e-07!2;UBERON:0006514!1.36e-07!2;UBERON:0000341!1.45e-07!2;UBERON:0000945!2.37e-07!8;UBERON:0010039!2.37e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.71e-66;3!UBERON:0004177;1.81e-40;5!UBERON:0005057;1.81e-40;5!UBERON:0002046;4.05e-40;5!UBERON:0002075;4.07e-12;18!UBERON:0000077;1.98e-08;27!UBERON:0002405;1.98e-08;27!UBERON:0002390;3.37e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.71e-66,3;UBERON:0004854,1.71e-66,3;UBERON:0009034,1.71e-66,3;UBERON:0002095,1.71e-66,3;UBERON:0004782,1.71e-66,3;UBERON:0003281,1.71e-66,3;UBERON:0009664,1.71e-66,3;UBERON:0002296,1.71e-66,3;UBERON:0005602,1.71e-66,3;UBERON:0001179,1.71e-66,3;UBERON:0006293,1.71e-66,3;UBERON:0002046,4.05e-40,5;UBERON:0004117,4.05e-40,5;UBERON:0007689,4.05e-40,5;UBERON:0007123,4.05e-40,5;UBERON:0003091,4.05e-40,5;UBERON:0004177,2.74e-29,7;UBERON:0005057,2.74e-29,7;UBERON:0000945,8.65e-26,8;UBERON:0010039,8.65e-26,8;UBERON:0009722,6.17e-19,11;UBERON:0007690,6.17e-19,11;UBERON:0004457,1.33e-17,12;UBERON:0000042,1.33e-17,12;UBERON:0003887,1.33e-17,12;UBERON:0002075,4.07e-12,18;UBERON:0008814,5.09e-12,18;UBERON:0005409,1.03e-08,25;UBERON:0000077,6.44e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.2326022707326,14.7608563459492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0.124149428591716,0,3.81882949668989,4.44657815708082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@TPO | |||
}} |
Revision as of 13:41, 12 September 2013
Short description: | p2@TPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TPO_5end |
Coexpression cluster: | C178_spleen_liver_Hepatocyte_b_lymph_vein_thymus |
Association with transcript: | 0bp_to_ENST00000382198, NM_175721, NM_175722, uc010yio.1, uc010yip.1_5end |
EntrezGene: | TPO |
HGNC: | 12015 |
UniProt: | P07202Q502Y3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 1.71e-66 | 3 |
gastrointestinal system mesentery | 1.71e-66 | 3 |
stomach region | 1.71e-66 | 3 |
mesentery | 1.71e-66 | 3 |
gastrointestinal system serosa | 1.71e-66 | 3 |
mesentery of stomach | 1.71e-66 | 3 |
gut mesentery | 1.71e-66 | 3 |
dorsal mesentery | 1.71e-66 | 3 |
dorsal mesogastrium | 1.71e-66 | 3 |
peritoneal cavity | 1.71e-66 | 3 |
spleen primordium | 1.71e-66 | 3 |
thyroid gland | 4.05e-40 | 5 |
pharyngeal pouch | 4.05e-40 | 5 |
thyroid diverticulum | 4.05e-40 | 5 |
pharyngeal pouch 2 | 4.05e-40 | 5 |
thyroid primordium | 4.05e-40 | 5 |
hemopoietic organ | 2.74e-29 | 7 |
immune organ | 2.74e-29 | 7 |
stomach | 8.65e-26 | 8 |
food storage organ | 8.65e-26 | 8 |
entire pharyngeal arch endoderm | 6.17e-19 | 11 |
early pharyngeal endoderm | 6.17e-19 | 11 |
cavity lining | 1.33e-17 | 12 |
serous membrane | 1.33e-17 | 12 |
intraembryonic coelom | 1.33e-17 | 12 |
viscus | 4.07e-12 | 18 |
pharyngeal arch system | 5.09e-12 | 18 |
gastrointestinal system | 1.03e-08 | 25 |
mixed endoderm/mesoderm-derived structure | 6.44e-08 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.