FFCP PHASE1:Mm9::chr10:66559654..66559671,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=28193|HGNC=|MCL_coexpression_id=2573|UniProt=Q99KK1|association_with_transcript=-49bp_to_ENSMUST00000020023,uc007flq.1,uc011xfn.1_5end|description=CAGE_peak_1_at_Reep3_5end|id=chr10:66559654..66559671,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!8.82e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.19e-11,31;UBERON:0005409,3.80e-09,47;UBERON:0000344,8.82e-07,15|phase1_expression=20.0186058880992,103.296720661251,120.119799198838,113.726543451368,107.692581938465,30.3861482160521,22.1932008565749,10.2007425518845,40.8287294239834,43.7700664222128,10.2730780935303,14.0398999831792,2.39681021903688,3.14713448708391,3.99731714178795,4.656931149966,4.19737126876888,6.46697438984387,9.73512478600745,7.21462408056651,11.9060606211498,5.46100231604869,5.22399578277871,56.4773252460726,63.3169615745389,106.807145325394,70.6449673700883,60.9783588501066,56.8170024174558,64.2676830887823,60.5324294088982,3.17515336729816,0,0,12.1317680295535,10.140313366868,10.4126371693808,34.7381253511633,28.1280724028568,29.3173296625327,45.8820560664191,45.7640474922159,41.7538903606792,12.211991343631,13.787262645854,14.1330999164495,0.782391344348039,18.0960879795771,9.66619204031676,14.9711022287198,15.1185335355392,8.62515386189829,7.88578248471361,9.42970784614748,4.7053131879945,16.7218633423366,11.1748041576115,15.4701627683233,8.6996078169627,3.1739458756322,10.1413024560989,6.09920157724438,9.78224275722253,8.99899717281399,6.92206453796882,5.6838409195688,6.89080254192331,8.06858441175265,12.1316846400919,9.99043943654511,12.1988477583802,20.8525218614777,17.2277461942259,8.08439274818697,10.2554653989513,6.43453150627015,3.30347642998166,7.53355294702608,8.44835932909339,7.64940468835124,6.86157327018072,8.33461392890816,8.09630697104005,5.06486349028512,6.87592114995646,16.7938293719991,14.0947963991112,12.1159639786445,19.8402626532942,25.014186395346,22.3195656300292,35.2773789562368,61.1974200336975,30.2233787317178,55.2309954830519,44.3546618226362,19.9431076587088,23.0080935480378,12.4697282209377,13.4269038313929,12.8167511996779,8.98285341900225,5.09610479413291,7.11066703153331,14.7213907887626,14.9482320630308,14.6602089054287,33.9126122765608,22.7865337609511,10.0940654564081,7.28638372417771,8.52503339273995,11.0695438682908,8.44046787094686,10.9357497636205,12.0639927676488,23.4835219347655,27.763076528623,13.2691582792481,14.7207833452142,11.4837589599405,10.6672555689749,57.7814459776179,10.8328894894272,17.3840766655168,53.3905245385956,3.71426885968353,3.59941638596045,3.17675567682662,8.98743836428936,9.60751265919116,7.66491547888473,5.38855392596057,8.69432554923124,7.2725815595846,10.2211995732687,11.8133662066367,17.9146037678534,14.9106427475868,6.52369753248069,8.58794923553845,7.35686734187113,5.22180176435513,9.0422890701429,12.042460349785,9.73664274164858,11.7127155699661,11.9003550539947,4.74249584452253,6.80781888604149,12.1406275673125,10.5213951565236,16.6828349535359,18.1091126591527,22.4302528684658,8.95654200683219,6.31991868581911,2.31613116403244,3.12579849335152,8.07790512888457,6.56672967947069,9.54328925743379,9.70653415899362,10.4285042826124,11.7243005794407,5.8133486187602,12.3405764643825,13.8950757416932,11.5191894939436,14.9392392311977,14.4302480991623,13.7427988179812,13.6121071480451,14.8969124824013,9.2527577368216,10.496270462687,175.452373764397,79.5996205657268,7.03851226766272,8.12828351511535,10.6959992897337,16.7397325437374,32.9119504890408,42.0398633708756,68.8067139239542,57.9740320628518,51.7750530128555,54.9119862833576,60.048938832689,53.0303451105991,54.6829266182976,64.3226312611606,9.48339504765408,10.0538691096561,11.270773567308,12.6263823264095,9.89157684554891,17.2534116930184,18.7180149887802,25.0937251565324,23.863806631889,28.3813477020141,61.9585990612141,3.50374722003798,4.52085688760367,5.39669069723649,5.47722327748958,8.44120059133459,11.2035374783825,20.4264257590076,14.1057647294281,21.1412288154823,25.8782771749238,27.5384301274693,29.6435789458833,39.1497260818023,41.7995973506055,56.445891999514,20.6923572986597,5.68474235311454,6.68156403412306,6.45031325945715,7.51008794523207,9.04533790185805,20.2337094753112,20.4890330250689,14.1871629695572,19.9318220683897,20.4102103881583,16.7140581010053,17.2684981865896,17.6471851469444,15.0791283939272,15.7732648307426,8.35999264132362,10.2096596132751,8.99083303931635,17.9333880486071,8.52461715958712,9.59389523376617,10.0962630213202,11.3227235846025,12.9254038639679,16.2498782607735,18.0466926006739,24.3445816478396,16.1924280669958,9.64444331107329,19.3691011193797,7.39039027770156,20.2974321847824,9.25941139069727,14.4969393824683,30.0245623810015,18.5843193675948,2.42780636154981,3.93020624054176,7.35559811048003,8.56375489354241,10.1453598821496,22.7416897988035,10.1789444253702,11.4079161083111,9.16506598013866,9.48767477174989,9.282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| ||
|EntrezGene=28193 | |||
|HGNC= | |||
|MCL_coexpression_id=2573 | |||
|UniProt=Q99KK1 | |||
|association_with_transcript=-49bp_to_ENSMUST00000020023,uc007flq.1,uc011xfn.1_5end | |||
|description=CAGE_peak_1_at_Reep3_5end | |||
|id=chr10:66559654..66559671,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.82e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.19e-11,31;UBERON:0005409,3.80e-09,47;UBERON:0000344,8.82e-07,15 | |||
|phase1_expression=20.0186058880992,103.296720661251,120.119799198838,113.726543451368,107.692581938465,30.3861482160521,22.1932008565749,10.2007425518845,40.8287294239834,43.7700664222128,10.2730780935303,14.0398999831792,2.39681021903688,3.14713448708391,3.99731714178795,4.656931149966,4.19737126876888,6.46697438984387,9.73512478600745,7.21462408056651,11.9060606211498,5.46100231604869,5.22399578277871,56.4773252460726,63.3169615745389,106.807145325394,70.6449673700883,60.9783588501066,56.8170024174558,64.2676830887823,60.5324294088982,3.17515336729816,0,0,12.1317680295535,10.140313366868,10.4126371693808,34.7381253511633,28.1280724028568,29.3173296625327,45.8820560664191,45.7640474922159,41.7538903606792,12.211991343631,13.787262645854,14.1330999164495,0.782391344348039,18.0960879795771,9.66619204031676,14.9711022287198,15.1185335355392,8.62515386189829,7.88578248471361,9.42970784614748,4.7053131879945,16.7218633423366,11.1748041576115,15.4701627683233,8.6996078169627,3.1739458756322,10.1413024560989,6.09920157724438,9.78224275722253,8.99899717281399,6.92206453796882,5.6838409195688,6.89080254192331,8.06858441175265,12.1316846400919,9.99043943654511,12.1988477583802,20.8525218614777,17.2277461942259,8.08439274818697,10.2554653989513,6.43453150627015,3.30347642998166,7.53355294702608,8.44835932909339,7.64940468835124,6.86157327018072,8.33461392890816,8.09630697104005,5.06486349028512,6.87592114995646,16.7938293719991,14.0947963991112,12.1159639786445,19.8402626532942,25.014186395346,22.3195656300292,35.2773789562368,61.1974200336975,30.2233787317178,55.2309954830519,44.3546618226362,19.9431076587088,23.0080935480378,12.4697282209377,13.4269038313929,12.8167511996779,8.98285341900225,5.09610479413291,7.11066703153331,14.7213907887626,14.9482320630308,14.6602089054287,33.9126122765608,22.7865337609511,10.0940654564081,7.28638372417771,8.52503339273995,11.0695438682908,8.44046787094686,10.9357497636205,12.0639927676488,23.4835219347655,27.763076528623,13.2691582792481,14.7207833452142,11.4837589599405,10.6672555689749,57.7814459776179,10.8328894894272,17.3840766655168,53.3905245385956,3.71426885968353,3.59941638596045,3.17675567682662,8.98743836428936,9.60751265919116,7.66491547888473,5.38855392596057,8.69432554923124,7.2725815595846,10.2211995732687,11.8133662066367,17.9146037678534,14.9106427475868,6.52369753248069,8.58794923553845,7.35686734187113,5.22180176435513,9.0422890701429,12.042460349785,9.73664274164858,11.7127155699661,11.9003550539947,4.74249584452253,6.80781888604149,12.1406275673125,10.5213951565236,16.6828349535359,18.1091126591527,22.4302528684658,8.95654200683219,6.31991868581911,2.31613116403244,3.12579849335152,8.07790512888457,6.56672967947069,9.54328925743379,9.70653415899362,10.4285042826124,11.7243005794407,5.8133486187602,12.3405764643825,13.8950757416932,11.5191894939436,14.9392392311977,14.4302480991623,13.7427988179812,13.6121071480451,14.8969124824013,9.2527577368216,10.496270462687,175.452373764397,79.5996205657268,7.03851226766272,8.12828351511535,10.6959992897337,16.7397325437374,32.9119504890408,42.0398633708756,68.8067139239542,57.9740320628518,51.7750530128555,54.9119862833576,60.048938832689,53.0303451105991,54.6829266182976,64.3226312611606,9.48339504765408,10.0538691096561,11.270773567308,12.6263823264095,9.89157684554891,17.2534116930184,18.7180149887802,25.0937251565324,23.863806631889,28.3813477020141,61.9585990612141,3.50374722003798,4.52085688760367,5.39669069723649,5.47722327748958,8.44120059133459,11.2035374783825,20.4264257590076,14.1057647294281,21.1412288154823,25.8782771749238,27.5384301274693,29.6435789458833,39.1497260818023,41.7995973506055,56.445891999514,20.6923572986597,5.68474235311454,6.68156403412306,6.45031325945715,7.51008794523207,9.04533790185805,20.2337094753112,20.4890330250689,14.1871629695572,19.9318220683897,20.4102103881583,16.7140581010053,17.2684981865896,17.6471851469444,15.0791283939272,15.7732648307426,8.35999264132362,10.2096596132751,8.99083303931635,17.9333880486071,8.52461715958712,9.59389523376617,10.0962630213202,11.3227235846025,12.9254038639679,16.2498782607735,18.0466926006739,24.3445816478396,16.1924280669958,9.64444331107329,19.3691011193797,7.39039027770156,20.2974321847824,9.25941139069727,14.4969393824683,30.0245623810015,18.5843193675948,2.42780636154981,3.93020624054176,7.35559811048003,8.56375489354241,10.1453598821496,22.7416897988035,10.1789444253702,11.4079161083111,9.16506598013866,9.48767477174989,9.28219889233682,12.5962654128902,9.18311579559682,12.6771510107099,14.1462443120851,18.2660440651542,12.3074484145429,17.4421961838248,8.82948352432338,13.6109590676952,13.5572525352845,29.109748543255,33.307023094179,39.235855687105,30.6389658635032,26.26191568069,29.545361954111,50.717665573594,12.0526446306831,7.34744787430767,8.66824845445534,8.70414278637645,7.34636982318295,5.46776910884101,6.63456702298916,10.7086410896129,7.83728133012485,8.7065983496787,20.0480829783174,7.11755985557555,13.2157653632452,18.6849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| |||
|short_description=p1@Reep3 | |||
}} | |||
Revision as of 17:10, 12 September 2013
| Short description: | p1@Reep3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Reep3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2573 |
| Association with transcript: | -49bp_to_ENSMUST00000020023, uc007flq.1, uc011xfn.1_5end |
| EntrezGene: | Reep3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 3.19e-11 | 31 |
| gastrointestinal system | 3.80e-09 | 47 |
| mucosa | 8.82e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
