FFCP PHASE1:Hg19::chr2:30457156..30457167,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81606|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29532|TSSclassifier=S|UniProt=|association_with_transcript=24bp_to_ENST00000484150_5end|coexpression_cluster_id=C18|description=CAGE_peak_11_at_LBH_5end|id=chr2:30457156..30457167,+|ontology_enrichment_celltype=CL:0000791!2.09e-43!18;CL:0000789!2.09e-43!18;CL:0002420!2.09e-43!18;CL:0002419!2.09e-43!18;CL:0000790!2.09e-43!18;CL:0000084!2.12e-33!25;CL:0000827!2.12e-33!25;CL:0000625!9.37e-31!11;CL:0000838!3.32e-25!52;CL:0000542!1.33e-24!53;CL:0000051!1.33e-24!53;CL:0000624!4.66e-17!6;CL:0002087!4.66e-14!119;CL:0000738!1.06e-13!140;CL:0002031!3.71e-11!124;CL:0000898!6.33e-10!3;CL:0000037!1.27e-09!172;CL:0000566!1.27e-09!172;CL:0000988!1.17e-08!182;CL:0000842!1.55e-08!3;CL:0000623!1.72e-08!3;CL:0000825!1.72e-08!3;CL:0002032!4.83e-08!165;CL:0000837!4.83e-08!165;CL:0000815!3.57e-07!2;CL:0000792!3.57e-07!2;CL:0002677!3.57e-07!2|ontology_enrichment_celltype_v019=CL:0000791;8.99e-48;18!CL:0000789;8.99e-48;18!CL:0002419;8.99e-48;18!CL:0000625;2.84e-38;11!CL:0000084;1.23e-33;25!CL:0000898;5.07e-17;3!CL:0000624;1.62e-14;6!CL:0000815;7.43e-12;2!CL:0000792;7.43e-12;2!CL:0002677;7.43e-12;2!CL:0000542;3.13e-09;53!CL:0000895;7.18e-07;1|ontology_enrichment_celltype_v019_2=CL:0000791,8.05e-48,18;CL:0000789,8.05e-48,18;CL:0002420,8.05e-48,18;CL:0002419,8.05e-48,18;CL:0000790,8.05e-48,18;CL:0000625,2.56e-38,11;CL:0000084,1.14e-33,25;CL:0000827,1.14e-33,25;CL:0000838,3.21e-17,52;CL:0000898,5.22e-17,3;CL:0000542,7.71e-17,53;CL:0000051,7.71e-17,53;CL:0000624,1.60e-14,6;CL:0000815,6.15e-12,2;CL:0000792,6.15e-12,2;CL:0002677,6.15e-12,2;CL:0000810,8.97e-07,1;CL:0000895,8.97e-07,1;CL:0002436,8.97e-07,1;CL:0002427,8.97e-07,1;CL:0002428,8.97e-07,1;CL:0002429,8.97e-07,1;CL:0002433,8.97e-07,1;CL:0002431,8.97e-07,1;CL:0002432,8.97e-07,1|ontology_enrichment_development_v019=CL:0000790;8.99e-48;18!CL:0000051;3.13e-09;53!CL:0002427;7.18e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!5.21e-20!15;UBERON:0000179!5.21e-20!15;UBERON:0000463!5.21e-20!15;UBERON:0004177!2.41e-09!7;UBERON:0002370!7.28e-07!4;UBERON:0005058!7.28e-07!4;UBERON:0009113!7.28e-07!4;UBERON:0003295!7.28e-07!4;UBERON:0005562!7.28e-07!4|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-08;15!UBERON:0000179;2.41e-08;15!UBERON:0000463;2.41e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.77e-08,15;UBERON:0000179,2.77e-08,15;UBERON:0000463,2.77e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.647787332037959,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0.786839080455332,1.57204305099666,0.411202997999018,8.02495177875255,2.60737813306872,2.36723902867367,3.89653456815823,2.89667187901451,3.82987679717288,4.2091439970888,5.95768500283034,2.68991771423918,1.1705341280389,2.13769275984779,1.93445012450094,3.47763702882063,1.63115219478266,2.40786745280742,3.1360657141493,2.94604291013672,3.06576394881537,3.77990190030893,4.04831507231205,5.09704662918555,2.60433381542567,4.75226022224187,1.6563263098555,3.96758494578697,3.74792179657038,3.55165878066025,2.46338399076314,0.604820229674197,0.534880391567015,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.862510299438069,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,1.42939065274673,0.411362273086194,1.94541993357815,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=81606 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29532 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENST00000484150_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_11_at_LBH_5end | |||
|id=chr2:30457156..30457167,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.09e-43!18;CL:0000789!2.09e-43!18;CL:0002420!2.09e-43!18;CL:0002419!2.09e-43!18;CL:0000790!2.09e-43!18;CL:0000084!2.12e-33!25;CL:0000827!2.12e-33!25;CL:0000625!9.37e-31!11;CL:0000838!3.32e-25!52;CL:0000542!1.33e-24!53;CL:0000051!1.33e-24!53;CL:0000624!4.66e-17!6;CL:0002087!4.66e-14!119;CL:0000738!1.06e-13!140;CL:0002031!3.71e-11!124;CL:0000898!6.33e-10!3;CL:0000037!1.27e-09!172;CL:0000566!1.27e-09!172;CL:0000988!1.17e-08!182;CL:0000842!1.55e-08!3;CL:0000623!1.72e-08!3;CL:0000825!1.72e-08!3;CL:0002032!4.83e-08!165;CL:0000837!4.83e-08!165;CL:0000815!3.57e-07!2;CL:0000792!3.57e-07!2;CL:0002677!3.57e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.99e-48;18!CL:0000789;8.99e-48;18!CL:0002419;8.99e-48;18!CL:0000625;2.84e-38;11!CL:0000084;1.23e-33;25!CL:0000898;5.07e-17;3!CL:0000624;1.62e-14;6!CL:0000815;7.43e-12;2!CL:0000792;7.43e-12;2!CL:0002677;7.43e-12;2!CL:0000542;3.13e-09;53!CL:0000895;7.18e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.05e-48,18;CL:0000789,8.05e-48,18;CL:0002420,8.05e-48,18;CL:0002419,8.05e-48,18;CL:0000790,8.05e-48,18;CL:0000625,2.56e-38,11;CL:0000084,1.14e-33,25;CL:0000827,1.14e-33,25;CL:0000838,3.21e-17,52;CL:0000898,5.22e-17,3;CL:0000542,7.71e-17,53;CL:0000051,7.71e-17,53;CL:0000624,1.60e-14,6;CL:0000815,6.15e-12,2;CL:0000792,6.15e-12,2;CL:0002677,6.15e-12,2;CL:0000810,8.97e-07,1;CL:0000895,8.97e-07,1;CL:0002436,8.97e-07,1;CL:0002427,8.97e-07,1;CL:0002428,8.97e-07,1;CL:0002429,8.97e-07,1;CL:0002433,8.97e-07,1;CL:0002431,8.97e-07,1;CL:0002432,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;8.99e-48;18!CL:0000051;3.13e-09;53!CL:0002427;7.18e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.21e-20!15;UBERON:0000179!5.21e-20!15;UBERON:0000463!5.21e-20!15;UBERON:0004177!2.41e-09!7;UBERON:0002370!7.28e-07!4;UBERON:0005058!7.28e-07!4;UBERON:0009113!7.28e-07!4;UBERON:0003295!7.28e-07!4;UBERON:0005562!7.28e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-08;15!UBERON:0000179;2.41e-08;15!UBERON:0000463;2.41e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.77e-08,15;UBERON:0000179,2.77e-08,15;UBERON:0000463,2.77e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.647787332037959,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0.786839080455332,1.57204305099666,0.411202997999018,8.02495177875255,2.60737813306872,2.36723902867367,3.89653456815823,2.89667187901451,3.82987679717288,4.2091439970888,5.95768500283034,2.68991771423918,1.1705341280389,2.13769275984779,1.93445012450094,3.47763702882063,1.63115219478266,2.40786745280742,3.1360657141493,2.94604291013672,3.06576394881537,3.77990190030893,4.04831507231205,5.09704662918555,2.60433381542567,4.75226022224187,1.6563263098555,3.96758494578697,3.74792179657038,3.55165878066025,2.46338399076314,0.604820229674197,0.534880391567015,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.862510299438069,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,1.42939065274673,0.411362273086194,1.94541993357815,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0,0,0,0,0,0,0.904244737704086,0.372448285775147,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p11@LBH | |||
}} |
Revision as of 18:17, 12 September 2013
Short description: | p11@LBH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_LBH_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 24bp_to_ENST00000484150_5end |
EntrezGene: | LBH |
HGNC: | 29532 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.05e-48 | 18 |
alpha-beta T cell | 8.05e-48 | 18 |
immature T cell | 8.05e-48 | 18 |
mature T cell | 8.05e-48 | 18 |
immature alpha-beta T cell | 8.05e-48 | 18 |
CD8-positive, alpha-beta T cell | 2.56e-38 | 11 |
T cell | 1.14e-33 | 25 |
pro-T cell | 1.14e-33 | 25 |
lymphoid lineage restricted progenitor cell | 3.21e-17 | 52 |
naive T cell | 5.22e-17 | 3 |
lymphocyte | 7.71e-17 | 53 |
common lymphoid progenitor | 7.71e-17 | 53 |
CD4-positive, alpha-beta T cell | 1.60e-14 | 6 |
regulatory T cell | 6.15e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.15e-12 | 2 |
naive regulatory T cell | 6.15e-12 | 2 |
CD4-positive, alpha-beta thymocyte | 8.97e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 8.97e-07 | 1 |
mature CD4 single-positive thymocyte | 8.97e-07 | 1 |
resting double-positive thymocyte | 8.97e-07 | 1 |
double-positive blast | 8.97e-07 | 1 |
CD69-positive double-positive thymocyte | 8.97e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 8.97e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 8.97e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.77e-08 | 15 |
haemolymphatic fluid | 2.77e-08 | 15 |
organism substance | 2.77e-08 | 15 |
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