FFCP PHASE1:Mm9::chr11:114995242..114995263,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=246746|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=41bp_to_ENSMUST00000146254_5end|description=CAGE_peak_2_at_Cd300lf_5end|id=chr11:114995242..114995263,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,2.76e-09,6;CL:0000556,2.76e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!3.35e-10!70;UBERON:0002193!1.53e-08!48;UBERON:0000926!2.81e-08!193;UBERON:0004120!2.81e-08!193;UBERON:0006603!2.81e-08!193;UBERON:0004119!1.19e-07!130;UBERON:0000925!1.19e-07!130;UBERON:0006595!1.19e-07!130;UBERON:0001007!1.81e-07!128;UBERON:0001555!1.81e-07!128;UBERON:0007026!1.81e-07!128;UBERON:0001474!2.64e-07!22;UBERON:0004765!2.64e-07!22;UBERON:0001434!2.64e-07!22;UBERON:0002390!5.15e-07!45;UBERON:0003061!5.15e-07!45;UBERON:0002371!7.30e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.55e-11,22;UBERON:0004765,1.55e-11,22;UBERON:0001434,1.55e-11,22;UBERON:0002204,3.36e-11,32;UBERON:0002193,5.61e-11,48;UBERON:0002405,5.61e-11,48;UBERON:0002371,1.57e-10,16;UBERON:0002106,1.18e-09,6;UBERON:0004457,1.18e-09,6;UBERON:0000042,1.18e-09,6;UBERON:0004854,1.18e-09,6;UBERON:0009034,1.18e-09,6;UBERON:0002095,1.18e-09,6;UBERON:0004782,1.18e-09,6;UBERON:0003281,1.18e-09,6;UBERON:0009664,1.18e-09,6;UBERON:0002296,1.18e-09,6;UBERON:0005602,1.18e-09,6;UBERON:0001179,1.18e-09,6;UBERON:0006293,1.18e-09,6;UBERON:0002390,2.72e-08,45;UBERON:0003061,2.72e-08,45;UBERON:0003887,3.66e-07,10|phase1_expression=0,0,0,0,0,1.34303417529512,0.934450562382103,0.129123323441576,0,0,0,0,0,0,2.6648780945253,1.82227740650843,4.19737126876888,4.57420139769445,2.74228867211478,2.97072756258621,0.340173160604279,3.27660138962921,4.4403964153619,3.51983330145495,4.35877634027623,0.57423196411502,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.408338712524738,55.2461752572718,32.0347491254758,41.8818995179039,51.7643709467293,58.7419117064263,60.6887941288942,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,12.1486461832989,7.9109309005358,7.8152812644071,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,7.50919862576798,0.890652834388949,0,0.304465478312141,0.230615497256059,0.301445281105245,0.823120949949934,0.125666591329675,0.494389935468748,0,3.5384422077995,0.647067399789637,2.20841518460394,1.93950101254089,1.86391761218122,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.203678727700633,2.11491850037158,0.252722758433675,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0.822799249567402,0,0,0.146199987425332,0,0,0,0,0,1.05780226665418,0.213288250535234,0,0.128867461322093,0.403367049246685,0,0.951128130562796,0.474529061544512,0,1.00534083520108,0.596869416123452,0.779856348476481,1.79763881730844,0.432276099749388,0.995706366271836,0,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,1.1858105083486,0,0.196558995113203,0.224862112384854,1.42002084971952,0.964708639009667,0.763877555344259,2.30156909960649,5.35046248357617,1.64736847912849,4.31304619582064,2.60498663367952,0,0.252578877947112,0.358794827043824,0.964887042726734,4.61882975416512,0,0.162964976442026,0.678980343100753,0.469380496577004,0.502518772325447,0.476087281772027,2.14647012643579,0.788175720530955,2.6575762757853,1.43509291791738,1.47476983244164,2.76295970985433,3.47157740595628,1.50791283939272,7.07077388964322,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0,1.15479086080775,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0.322928853391811,0.180938774784468,0,0.164140899745061,1.45740418314925,0.18542530201051,6.4930934703184,1.44470807574256,8.88933731374616,3.39063222608444,4.10082683163076,2.97411625168479,0,0.279902904647316,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0,0.388902376688095,0.129159823477731,0.337912250981556,0.469428954583016,0,0,0,0,1.58005560314089,0.202725215290164,0.821687657318618,0.51968329191118,0.537080087002444,0,0.120195449519969,0.147689527174577,0.403865799792591,0.609654453239999,0.201652370273681,1.07203668813728,0.962118416403295,0.350630706544707,0,0,0,0,0.386379188064381,0.187682475451182,0.549454872801795,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.402048282689293,0,0.579421629724277,0,0,0.147198920134397,0,0.177475806159338,0,0,0.376437521661322,0.33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| ||
|EntrezGene=246746 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt= | |||
|association_with_transcript=41bp_to_ENSMUST00000146254_5end | |||
|description=CAGE_peak_2_at_Cd300lf_5end | |||
|id=chr11:114995242..114995263,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.76e-09,6;CL:0000556,2.76e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.35e-10!70;UBERON:0002193!1.53e-08!48;UBERON:0000926!2.81e-08!193;UBERON:0004120!2.81e-08!193;UBERON:0006603!2.81e-08!193;UBERON:0004119!1.19e-07!130;UBERON:0000925!1.19e-07!130;UBERON:0006595!1.19e-07!130;UBERON:0001007!1.81e-07!128;UBERON:0001555!1.81e-07!128;UBERON:0007026!1.81e-07!128;UBERON:0001474!2.64e-07!22;UBERON:0004765!2.64e-07!22;UBERON:0001434!2.64e-07!22;UBERON:0002390!5.15e-07!45;UBERON:0003061!5.15e-07!45;UBERON:0002371!7.30e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.55e-11,22;UBERON:0004765,1.55e-11,22;UBERON:0001434,1.55e-11,22;UBERON:0002204,3.36e-11,32;UBERON:0002193,5.61e-11,48;UBERON:0002405,5.61e-11,48;UBERON:0002371,1.57e-10,16;UBERON:0002106,1.18e-09,6;UBERON:0004457,1.18e-09,6;UBERON:0000042,1.18e-09,6;UBERON:0004854,1.18e-09,6;UBERON:0009034,1.18e-09,6;UBERON:0002095,1.18e-09,6;UBERON:0004782,1.18e-09,6;UBERON:0003281,1.18e-09,6;UBERON:0009664,1.18e-09,6;UBERON:0002296,1.18e-09,6;UBERON:0005602,1.18e-09,6;UBERON:0001179,1.18e-09,6;UBERON:0006293,1.18e-09,6;UBERON:0002390,2.72e-08,45;UBERON:0003061,2.72e-08,45;UBERON:0003887,3.66e-07,10 | |||
|phase1_expression=0,0,0,0,0,1.34303417529512,0.934450562382103,0.129123323441576,0,0,0,0,0,0,2.6648780945253,1.82227740650843,4.19737126876888,4.57420139769445,2.74228867211478,2.97072756258621,0.340173160604279,3.27660138962921,4.4403964153619,3.51983330145495,4.35877634027623,0.57423196411502,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.408338712524738,55.2461752572718,32.0347491254758,41.8818995179039,51.7643709467293,58.7419117064263,60.6887941288942,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,12.1486461832989,7.9109309005358,7.8152812644071,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,7.50919862576798,0.890652834388949,0,0.304465478312141,0.230615497256059,0.301445281105245,0.823120949949934,0.125666591329675,0.494389935468748,0,3.5384422077995,0.647067399789637,2.20841518460394,1.93950101254089,1.86391761218122,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.203678727700633,2.11491850037158,0.252722758433675,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0.822799249567402,0,0,0.146199987425332,0,0,0,0,0,1.05780226665418,0.213288250535234,0,0.128867461322093,0.403367049246685,0,0.951128130562796,0.474529061544512,0,1.00534083520108,0.596869416123452,0.779856348476481,1.79763881730844,0.432276099749388,0.995706366271836,0,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,1.1858105083486,0,0.196558995113203,0.224862112384854,1.42002084971952,0.964708639009667,0.763877555344259,2.30156909960649,5.35046248357617,1.64736847912849,4.31304619582064,2.60498663367952,0,0.252578877947112,0.358794827043824,0.964887042726734,4.61882975416512,0,0.162964976442026,0.678980343100753,0.469380496577004,0.502518772325447,0.476087281772027,2.14647012643579,0.788175720530955,2.6575762757853,1.43509291791738,1.47476983244164,2.76295970985433,3.47157740595628,1.50791283939272,7.07077388964322,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0,1.15479086080775,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0.322928853391811,0.180938774784468,0,0.164140899745061,1.45740418314925,0.18542530201051,6.4930934703184,1.44470807574256,8.88933731374616,3.39063222608444,4.10082683163076,2.97411625168479,0,0.279902904647316,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0,0.388902376688095,0.129159823477731,0.337912250981556,0.469428954583016,0,0,0,0,1.58005560314089,0.202725215290164,0.821687657318618,0.51968329191118,0.537080087002444,0,0.120195449519969,0.147689527174577,0.403865799792591,0.609654453239999,0.201652370273681,1.07203668813728,0.962118416403295,0.350630706544707,0,0,0,0,0.386379188064381,0.187682475451182,0.549454872801795,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.402048282689293,0,0.579421629724277,0,0,0.147198920134397,0,0.177475806159338,0,0,0.376437521661322,0.338458431566706,0.365855945745545,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.499621155875892,0.467863216890817,1.07435527024149,1.14772999241306,0.661774257358546,2.08681052058379 | |||
|short_description=p2@Cd300lf | |||
}} |
Revision as of 18:44, 12 September 2013
Short description: | p2@Cd300lf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cd300lf_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 41bp_to_ENSMUST00000146254_5end |
EntrezGene: | Cd300lf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.76e-09 | 6 |
megakaryocyte | 2.76e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.55e-11 | 22 |
skeletal element | 1.55e-11 | 22 |
skeletal system | 1.55e-11 | 22 |
musculoskeletal system | 3.36e-11 | 32 |
hemolymphoid system | 5.61e-11 | 48 |
immune system | 5.61e-11 | 48 |
bone marrow | 1.57e-10 | 16 |
spleen | 1.18e-09 | 6 |
cavity lining | 1.18e-09 | 6 |
serous membrane | 1.18e-09 | 6 |
gastrointestinal system mesentery | 1.18e-09 | 6 |
stomach region | 1.18e-09 | 6 |
mesentery | 1.18e-09 | 6 |
gastrointestinal system serosa | 1.18e-09 | 6 |
mesentery of stomach | 1.18e-09 | 6 |
gut mesentery | 1.18e-09 | 6 |
dorsal mesentery | 1.18e-09 | 6 |
dorsal mesogastrium | 1.18e-09 | 6 |
peritoneal cavity | 1.18e-09 | 6 |
spleen primordium | 1.18e-09 | 6 |
hematopoietic system | 2.72e-08 | 45 |
blood island | 2.72e-08 | 45 |
intraembryonic coelom | 3.66e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.