FFCP PHASE1:Mm9::chr11:35793975..35794081,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=211652|HGNC=|UniProt=Q5SXA9|association_with_transcript=0bp_to_ENSMUST00000018993_5end|description=CAGE_peak_1_at_Wwc1_5end|id=chr11:35793975..35794081,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.16e-12!43;UBERON:0005177!2.93e-11!85;UBERON:0000481!2.85e-10!230;UBERON:0002100!1.55e-09!98;UBERON:0004111!2.72e-08!122;UBERON:0005409!4.14e-08!59;UBERON:0004119!1.40e-07!130;UBERON:0000925!1.40e-07!130;UBERON:0006595!1.40e-07!130;UBERON:0001007!2.33e-07!128;UBERON:0001555!2.33e-07!128;UBERON:0007026!2.33e-07!128;UBERON:0000922!3.23e-07!328;UBERON:0000468!3.38e-07!333;UBERON:0009569!3.44e-07!66;UBERON:0004921!3.72e-07!126;UBERON:0004185!3.72e-07!126;UBERON:0000955!9.27e-07!50;UBERON:0006238!9.27e-07!50;UBERON:0003080!9.76e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.63e-11,79;UBERON:0011216,1.80e-09,194;UBERON:0002100,1.41e-08,90;UBERON:0004111,3.96e-08,122;UBERON:0000160,6.00e-08,31;UBERON:0009569,4.91e-07,66;UBERON:0003080,9.55e-07,40|phase1_expression=70.7857904203189,174.487703819681,135.589773338082,132.781788763698,150.268718983904,46.1667997757697,34.8082834487333,0,0,0.468129052643987,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0,0,35.292965412694,0,0,23.5188861506308,25.693839479523,79.8182430119878,45.2300095967028,46.1108437947803,32.4940047270399,38.5606098532694,18.4036323843903,0,0,0,18.4865036640816,15.4598220183398,20.4169356262369,0,0,0,0,0,0,14.604030885167,12.1652317463417,10.8292583775392,8.60630478782843,187.937684799945,172.45365344656,173.237040075187,71.813034293811,158.127820801469,0,0,0,6.68874533693462,4.87106847895886,5.15672092277442,21.4455448511174,19.0436752537932,20.9164363157039,8.13226876965917,8.00365316500025,0,0,0,49.1344181250184,116.418146512431,30.0699875694585,28.7562648646501,28.604194743788,23.1377297367081,15.6816664075646,21.313399063402,19.7441670297567,23.8996884518605,27.5289702498472,29.240400421508,26.4203237200739,20.5742608859102,24.6101761290482,20.8365348222704,28.4766658981409,23.6360296213306,21.8501494320838,13.5529149317887,22.2099822046601,15.6575534493252,5.14938114665652,3.17400552448499,43.18980881655,29.2544118173671,24.478968013479,37.2395202230094,42.8852435515462,34.9460971935922,28.7911061270091,0,0,0,59.8584534050892,2.56652954828636,0,0,32.9066382337045,30.909903587962,29.3204178108574,37.6806803072898,0,49.4312323085867,12.1439728736295,13.0920155674221,12.6838523490832,12.2085338847624,14.1106448562846,28.0236498665176,22.7419370315624,2.89198713839823,0,1.29413479957927,0.441683036920787,0,18.6391761218122,12.5895742714965,8.16842156572475,44.4495276062949,0,0,0,24.4158742229861,31.5675415944852,20.6073137465098,37.1984045211472,34.010155824934,33.6616632186487,29.2034273521964,19.7568365869614,15.9240922380919,49.0282151361329,52.6104639716185,6.8963834770233,8.27647575960503,9.72335500948886,6.93242162044289,9.45707338203457,6.91814089538189,10.5882948752494,19.6614561761652,6.03590380211958,7.56424320671277,8.79755620819744,10.0830036916684,14.1804097105055,8.00979983000983,12.3469281844766,9.35461054046918,0,0,0,6.00664740352955,5.8631514995274,4.8616756594474,6.62885259638589,2.95146347621106,3.5481435964097,2.55787339225449,3.75582761959467,1.16765342367169,2.13927804887525,1.31333971263276,0.162137619091711,0.877199924551994,0.658650345873152,1.34206418760372,28.3891430561572,29.0191006909582,46.9194671836993,37.8164310328868,9.59797127408553,12.3085436086032,22.036335886078,31.8659968904881,29.5762798313678,27.202264534096,46.0293189698176,31.7868982617341,32.9249123528353,39.1944249921067,40.9424582950152,42.2445122067484,27.4495323340862,31.8626037206988,10.0523987505133,14.9665551518745,30.4310886317317,24.4381593414377,27.5412531778029,43.6946157916685,77.5912310514637,101.260561514007,76.3013817309081,74.1616955170021,69.66636736548,4.83850806576673,5.89676985339609,8.99448449539415,8.72298521970563,10.1294407096015,12.2220408855082,17.2617682470486,19.6183624397793,26.3578956660558,37.3797336971122,36.8419538191818,40.8769351780074,42.6858303730619,34.4443033962071,34.7359335381624,73.9012760666419,8.90609635321278,21.8373068432315,20.3694102930226,30.0403517809283,54.1045211537065,49.2750336634048,72.5897170031012,38.3053400178044,37.8704619299405,42.5744232315491,55.058073744488,61.4758535442588,62.488393307213,0,0,25.5717421969899,32.008662571349,15.8945084087914,12.7760738385501,7.86887737808042,0.252470927204373,6.31016438832513,6.63745865304285,5.38558494331997,5.25731355495614,4.23317480756549,7.92614286208731,2.42886421004937,2.33804686329049,2.76701444562566,24.7417413644791,11.2132667314532,11.3961986347043,12.3794089108718,31.0143831188367,63.7176664031822,25.734747432428,32.3486205952284,34.3261245155735,33.6644157884081,39.9665692327106,43.1575249590929,45.8052499141657,37.4322247303957,48.6696607221157,63.2511651449993,58.7872596514665,29.61824570057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| ||
|EntrezGene=211652 | |||
|HGNC= | |||
|UniProt=Q5SXA9 | |||
|association_with_transcript=0bp_to_ENSMUST00000018993_5end | |||
|description=CAGE_peak_1_at_Wwc1_5end | |||
|id=chr11:35793975..35794081,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.16e-12!43;UBERON:0005177!2.93e-11!85;UBERON:0000481!2.85e-10!230;UBERON:0002100!1.55e-09!98;UBERON:0004111!2.72e-08!122;UBERON:0005409!4.14e-08!59;UBERON:0004119!1.40e-07!130;UBERON:0000925!1.40e-07!130;UBERON:0006595!1.40e-07!130;UBERON:0001007!2.33e-07!128;UBERON:0001555!2.33e-07!128;UBERON:0007026!2.33e-07!128;UBERON:0000922!3.23e-07!328;UBERON:0000468!3.38e-07!333;UBERON:0009569!3.44e-07!66;UBERON:0004921!3.72e-07!126;UBERON:0004185!3.72e-07!126;UBERON:0000955!9.27e-07!50;UBERON:0006238!9.27e-07!50;UBERON:0003080!9.76e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.63e-11,79;UBERON:0011216,1.80e-09,194;UBERON:0002100,1.41e-08,90;UBERON:0004111,3.96e-08,122;UBERON:0000160,6.00e-08,31;UBERON:0009569,4.91e-07,66;UBERON:0003080,9.55e-07,40 | |||
|phase1_expression=70.7857904203189,174.487703819681,135.589773338082,132.781788763698,150.268718983904,46.1667997757697,34.8082834487333,0,0,0.468129052643987,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0,0,35.292965412694,0,0,23.5188861506308,25.693839479523,79.8182430119878,45.2300095967028,46.1108437947803,32.4940047270399,38.5606098532694,18.4036323843903,0,0,0,18.4865036640816,15.4598220183398,20.4169356262369,0,0,0,0,0,0,14.604030885167,12.1652317463417,10.8292583775392,8.60630478782843,187.937684799945,172.45365344656,173.237040075187,71.813034293811,158.127820801469,0,0,0,6.68874533693462,4.87106847895886,5.15672092277442,21.4455448511174,19.0436752537932,20.9164363157039,8.13226876965917,8.00365316500025,0,0,0,49.1344181250184,116.418146512431,30.0699875694585,28.7562648646501,28.604194743788,23.1377297367081,15.6816664075646,21.313399063402,19.7441670297567,23.8996884518605,27.5289702498472,29.240400421508,26.4203237200739,20.5742608859102,24.6101761290482,20.8365348222704,28.4766658981409,23.6360296213306,21.8501494320838,13.5529149317887,22.2099822046601,15.6575534493252,5.14938114665652,3.17400552448499,43.18980881655,29.2544118173671,24.478968013479,37.2395202230094,42.8852435515462,34.9460971935922,28.7911061270091,0,0,0,59.8584534050892,2.56652954828636,0,0,32.9066382337045,30.909903587962,29.3204178108574,37.6806803072898,0,49.4312323085867,12.1439728736295,13.0920155674221,12.6838523490832,12.2085338847624,14.1106448562846,28.0236498665176,22.7419370315624,2.89198713839823,0,1.29413479957927,0.441683036920787,0,18.6391761218122,12.5895742714965,8.16842156572475,44.4495276062949,0,0,0,24.4158742229861,31.5675415944852,20.6073137465098,37.1984045211472,34.010155824934,33.6616632186487,29.2034273521964,19.7568365869614,15.9240922380919,49.0282151361329,52.6104639716185,6.8963834770233,8.27647575960503,9.72335500948886,6.93242162044289,9.45707338203457,6.91814089538189,10.5882948752494,19.6614561761652,6.03590380211958,7.56424320671277,8.79755620819744,10.0830036916684,14.1804097105055,8.00979983000983,12.3469281844766,9.35461054046918,0,0,0,6.00664740352955,5.8631514995274,4.8616756594474,6.62885259638589,2.95146347621106,3.5481435964097,2.55787339225449,3.75582761959467,1.16765342367169,2.13927804887525,1.31333971263276,0.162137619091711,0.877199924551994,0.658650345873152,1.34206418760372,28.3891430561572,29.0191006909582,46.9194671836993,37.8164310328868,9.59797127408553,12.3085436086032,22.036335886078,31.8659968904881,29.5762798313678,27.202264534096,46.0293189698176,31.7868982617341,32.9249123528353,39.1944249921067,40.9424582950152,42.2445122067484,27.4495323340862,31.8626037206988,10.0523987505133,14.9665551518745,30.4310886317317,24.4381593414377,27.5412531778029,43.6946157916685,77.5912310514637,101.260561514007,76.3013817309081,74.1616955170021,69.66636736548,4.83850806576673,5.89676985339609,8.99448449539415,8.72298521970563,10.1294407096015,12.2220408855082,17.2617682470486,19.6183624397793,26.3578956660558,37.3797336971122,36.8419538191818,40.8769351780074,42.6858303730619,34.4443033962071,34.7359335381624,73.9012760666419,8.90609635321278,21.8373068432315,20.3694102930226,30.0403517809283,54.1045211537065,49.2750336634048,72.5897170031012,38.3053400178044,37.8704619299405,42.5744232315491,55.058073744488,61.4758535442588,62.488393307213,0,0,25.5717421969899,32.008662571349,15.8945084087914,12.7760738385501,7.86887737808042,0.252470927204373,6.31016438832513,6.63745865304285,5.38558494331997,5.25731355495614,4.23317480756549,7.92614286208731,2.42886421004937,2.33804686329049,2.76701444562566,24.7417413644791,11.2132667314532,11.3961986347043,12.3794089108718,31.0143831188367,63.7176664031822,25.734747432428,32.3486205952284,34.3261245155735,33.6644157884081,39.9665692327106,43.1575249590929,45.8052499141657,37.4322247303957,48.6696607221157,63.2511651449993,58.7872596514665,29.6182457005796,19.8067203434441,25.8717367565509,27.863814554107,29.9704994855442,22.1177333826567,20.404078554663,22.5304062344803,9.38686832254841,71.3874078811074,39.2540548537832,23.5787341706316,15.339120536111,20.9888978749982,28.2912455287433,35.2902934451882,49.2602613904448,18.913380805072,0.341741761595705,4.54051109519089,1.85194527369712,0.188368457004691,0.27338845544205,0,0,0,0.138199973804424,35.3228128665592,8.69923982348122,19.7219883113043,14.9047370334086,18.1906817532588,18.1240927909327,17.3975006836419,23.6388883374461,31.9342249220516,11.6653475962614,75.8033961966049,2.25477175473676,5.08356256549528,3.14371131868485,4.4723773319131,5.94135187997563,3.21016638432478,3.87278887530988,8.98410255423256,5.97698263226552,3.38217769156408,3.16833006883652,3.79213344753814,9.12263468805739,6.36807934421929,2.46849563657811,3.75956060901711,2.18549490259391,3.4856680360791,2.21534290761866,1.81739609906666,2.057583779685,1.31074040677893,1.55932609183604,1.25075394132428,1.28564592399726,19.272082607293,44.1752047214389,31.489563669926,35.2557694364565,30.7171454511183,22.5218970541418,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| |||
|short_description=p1@Wwc1 | |||
}} | |||
Revision as of 19:34, 12 September 2013
| Short description: | p1@Wwc1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Wwc1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000018993_5end |
| EntrezGene: | Wwc1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk region element | 3.63e-11 | 79 |
| organ system subdivision | 1.80e-09 | 194 |
| trunk | 1.41e-08 | 90 |
| anatomical conduit | 3.96e-08 | 122 |
| intestine | 6.00e-08 | 31 |
| subdivision of trunk | 4.91e-07 | 66 |
| anterior neural tube | 9.55e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
