FFCP PHASE1:Mm9::chr11:70249208..70249219,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:70249208..70249219,+|id=chr11:70249208..70249219,+|ontology_enrichment_celltype=CL:0000791!4.87e-08!9;CL:0000789!4.87e-08!9;CL:0002420!4.87e-08!9;CL:0002419!4.87e-08!9;CL:0000790!4.87e-08!9;CL:0000084!6.23e-08!11;CL:0000827!6.23e-08!11;CL:0000738!2.60e-07!17;CL:0002087!2.60e-07!17;CL:0000838!4.04e-07!12|ontology_enrichment_celltype_v019_2=CL:0000625,5.62e-10,1;CL:0000355,1.37e-09,9;CL:0000791,3.68e-09,9;CL:0000789,3.68e-09,9;CL:0002420,3.68e-09,9;CL:0002419,3.68e-09,9;CL:0000790,3.68e-09,9;CL:0000084,1.34e-07,11;CL:0000827,1.34e-07,11;CL:0000838,5.17e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.06e-27,3;DOID:4045,2.06e-27,3;DOID:0050686,4.51e-14,6|ontology_enrichment_uberon=UBERON:0002390!7.93e-21!45;UBERON:0003061!7.93e-21!45;UBERON:0002193!1.15e-20!48;UBERON:0004177!4.00e-20!29;UBERON:0002370!3.47e-16!23;UBERON:0000974!3.47e-16!23;UBERON:0004807!3.47e-16!23;UBERON:0005058!3.47e-16!23;UBERON:0003351!3.47e-16!23;UBERON:0009113!3.47e-16!23;UBERON:0003295!3.47e-16!23;UBERON:0009722!3.47e-16!23;UBERON:0005562!3.47e-16!23;UBERON:0007690!3.47e-16!23;UBERON:0006562!2.74e-15!24;UBERON:0003408!2.74e-15!24;UBERON:0001557!2.74e-15!24;UBERON:0001042!2.74e-15!24;UBERON:0008814!2.74e-15!24;UBERON:0009145!2.74e-15!24;UBERON:0002405!1.33e-14!70;UBERON:0000072!5.28e-13!27;UBERON:0005057!7.60e-12!51;UBERON:0000065!6.54e-10!41;UBERON:0001004!1.54e-09!42;UBERON:0000063!7.01e-09!35;UBERON:0003081!8.13e-09!88;UBERON:0001041!1.47e-07!92;UBERON:0000077!9.41e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.37e-09,9;UBERON:0002036,1.37e-09,9;UBERON:0002385,1.37e-09,9;UBERON:0000486,1.37e-09,9;UBERON:0007503,1.37e-09,9;UBERON:0001015,1.37e-09,9;UBERON:0002329,1.37e-09,9;UBERON:0003082,1.37e-09,9;UBERON:0003059,1.37e-09,9;UBERON:0007282,1.37e-09,9;UBERON:0004290,1.37e-09,9;UBERON:0009618,1.37e-09,9;UBERON:0000383,1.09e-08,10;UBERON:0007524,5.99e-08,11;UBERON:0003077,5.99e-08,11;UBERON:0007285,5.99e-08,11|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0.563154888606667,0.234064526321993,0,0,1.02720437958723,1.39872643870396,0,0,0,0.157731082679119,0.137114433605739,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8339233831608,4.6880120671428,19.3703785270305,8.82347232046521,15.0270006690858,20.8769451803396,0,0,0,0,0,0,0,0,0,0,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0,0,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0.414599921413271,1.90934123603023,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0.596044064343795,0.480781798079875,0.295379054349154,0.403865799792591,0.381034033274999,0.302478555410522,0.487289403698762,0.384847366561318,0.701261413089414,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0|short_description=p@chr11:70249208..70249219,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:70249208..70249219,+ | |||
|id=chr11:70249208..70249219,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.87e-08!9;CL:0000789!4.87e-08!9;CL:0002420!4.87e-08!9;CL:0002419!4.87e-08!9;CL:0000790!4.87e-08!9;CL:0000084!6.23e-08!11;CL:0000827!6.23e-08!11;CL:0000738!2.60e-07!17;CL:0002087!2.60e-07!17;CL:0000838!4.04e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.62e-10,1;CL:0000355,1.37e-09,9;CL:0000791,3.68e-09,9;CL:0000789,3.68e-09,9;CL:0002420,3.68e-09,9;CL:0002419,3.68e-09,9;CL:0000790,3.68e-09,9;CL:0000084,1.34e-07,11;CL:0000827,1.34e-07,11;CL:0000838,5.17e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.06e-27,3;DOID:4045,2.06e-27,3;DOID:0050686,4.51e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.93e-21!45;UBERON:0003061!7.93e-21!45;UBERON:0002193!1.15e-20!48;UBERON:0004177!4.00e-20!29;UBERON:0002370!3.47e-16!23;UBERON:0000974!3.47e-16!23;UBERON:0004807!3.47e-16!23;UBERON:0005058!3.47e-16!23;UBERON:0003351!3.47e-16!23;UBERON:0009113!3.47e-16!23;UBERON:0003295!3.47e-16!23;UBERON:0009722!3.47e-16!23;UBERON:0005562!3.47e-16!23;UBERON:0007690!3.47e-16!23;UBERON:0006562!2.74e-15!24;UBERON:0003408!2.74e-15!24;UBERON:0001557!2.74e-15!24;UBERON:0001042!2.74e-15!24;UBERON:0008814!2.74e-15!24;UBERON:0009145!2.74e-15!24;UBERON:0002405!1.33e-14!70;UBERON:0000072!5.28e-13!27;UBERON:0005057!7.60e-12!51;UBERON:0000065!6.54e-10!41;UBERON:0001004!1.54e-09!42;UBERON:0000063!7.01e-09!35;UBERON:0003081!8.13e-09!88;UBERON:0001041!1.47e-07!92;UBERON:0000077!9.41e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.37e-09,9;UBERON:0002036,1.37e-09,9;UBERON:0002385,1.37e-09,9;UBERON:0000486,1.37e-09,9;UBERON:0007503,1.37e-09,9;UBERON:0001015,1.37e-09,9;UBERON:0002329,1.37e-09,9;UBERON:0003082,1.37e-09,9;UBERON:0003059,1.37e-09,9;UBERON:0007282,1.37e-09,9;UBERON:0004290,1.37e-09,9;UBERON:0009618,1.37e-09,9;UBERON:0000383,1.09e-08,10;UBERON:0007524,5.99e-08,11;UBERON:0003077,5.99e-08,11;UBERON:0007285,5.99e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0.563154888606667,0.234064526321993,0,0,1.02720437958723,1.39872643870396,0,0,0,0.157731082679119,0.137114433605739,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8339233831608,4.6880120671428,19.3703785270305,8.82347232046521,15.0270006690858,20.8769451803396,0,0,0,0,0,0,0,0,0,0,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0,0,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0.414599921413271,1.90934123603023,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0.596044064343795,0.480781798079875,0.295379054349154,0.403865799792591,0.381034033274999,0.302478555410522,0.487289403698762,0.384847366561318,0.701261413089414,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr11:70249208..70249219,+ | |||
}} |
Revision as of 20:44, 12 September 2013
Short description: | p@chr11:70249208..70249219, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:70249208..70249219, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.62e-10 | 1 |
multi-potent skeletal muscle stem cell | 1.37e-09 | 9 |
mature alpha-beta T cell | 3.68e-09 | 9 |
alpha-beta T cell | 3.68e-09 | 9 |
immature T cell | 3.68e-09 | 9 |
mature T cell | 3.68e-09 | 9 |
immature alpha-beta T cell | 3.68e-09 | 9 |
T cell | 1.34e-07 | 11 |
pro-T cell | 1.34e-07 | 11 |
lymphoid lineage restricted progenitor cell | 5.17e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.37e-09 | 9 |
striated muscle tissue | 1.37e-09 | 9 |
muscle tissue | 1.37e-09 | 9 |
multilaminar epithelium | 1.37e-09 | 9 |
epithelial vesicle | 1.37e-09 | 9 |
musculature | 1.37e-09 | 9 |
somite | 1.37e-09 | 9 |
myotome | 1.37e-09 | 9 |
presomitic mesoderm | 1.37e-09 | 9 |
presumptive segmental plate | 1.37e-09 | 9 |
dermomyotome | 1.37e-09 | 9 |
trunk paraxial mesoderm | 1.37e-09 | 9 |
musculature of body | 1.09e-08 | 10 |
dense mesenchyme tissue | 5.99e-08 | 11 |
paraxial mesoderm | 5.99e-08 | 11 |
presumptive paraxial mesoderm | 5.99e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.06e-27 | 3 |
muscle cancer | 2.06e-27 | 3 |
organ system cancer | 4.51e-14 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.