FFCP PHASE1:Hg19::chr3:124826812..124826843,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84561|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15595|TSSclassifier=N|UniProt=|association_with_transcript=-391bp_to_ENST00000461616_5end|coexpression_cluster_id=C30|description=CAGE_peak_9_at_SLC12A8_5end|id=chr3:124826812..124826843,-|ontology_enrichment_celltype=CL:0000077!2.76e-07!19|ontology_enrichment_celltype_v019=CL:0000319;3.75e-18;1!CL:0002581;1.22e-17;1!CL:0000159;9.46e-10;2|ontology_enrichment_celltype_v019_2=CL:0000319,3.75e-18,1;CL:0002581,1.03e-17,1;CL:0000159,9.46e-10,2|ontology_enrichment_development_v019=UBERON:0007123;1.84e-14;5|ontology_enrichment_disease=DOID:2394!1.50e-08!14|ontology_enrichment_disease_v019=DOID:3030;3.75e-18;1|ontology_enrichment_disease_v019_2=DOID:3030,3.75e-18,1|ontology_enrichment_uberon=UBERON:0002118!3.65e-07!5;UBERON:0004532!3.65e-07!5|ontology_enrichment_uberon_v019=UBERON:0000341;5.07e-34;2!UBERON:0002046;1.84e-14;5!UBERON:0000974;4.81e-12;6!UBERON:0005406;1.71e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0000341,3.62e-34,2;UBERON:0002046,1.84e-14,5;UBERON:0004117,1.84e-14,5;UBERON:0007689,1.84e-14,5;UBERON:0007123,1.84e-14,5;UBERON:0003091,1.84e-14,5;UBERON:0005406,1.57e-09,2;UBERON:0000974,1.29e-07,10;UBERON:0009722,4.57e-07,11;UBERON:0007690,4.57e-07,11|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.229240217243854,0.410502947249729,0.393553906568396,0,0,0,0.919421224478927,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.860509862246441,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,2.0994328148232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0.415941723061614,0.356857977594324,0.315404830067869,0.35142424497814,0,0,1.03473071292505,0,0.184369168541703,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0.918515585316854,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0.953150969619124,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.848432591722276,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0,0.369254416383208,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,6.83062910471503,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0.407992870545287,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0.251567901752575,3.55924488638614,0.457680136793847,0.151230923763239,0.621748802331122,0.295710299979268,0,0,0.155262956876259,0.414706207840855,0.53168342911599,0,0.450772826991655,0.761610424337591,0.406870733204662,0.181848659202559,0.322231671127465,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0.694567422971502,1.46842022703881,0,0.617602894321944,0.438568099157414,0.176689145945881,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,8.11050598887274,0,0,0,0,0,0.552317850755522,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,1.49263787330687,22.8541854205191,0,0.0620747142958579,0.560659312903067,7.76495330993612,34.3599221228973,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233|short_description=p9@SLC12A8}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84561 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15595 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-391bp_to_ENST00000461616_5end | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_9_at_SLC12A8_5end | |||
|id=chr3:124826812..124826843,- | |||
|ontology_enrichment_celltype=CL:0000077!2.76e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000319;3.75e-18;1!CL:0002581;1.22e-17;1!CL:0000159;9.46e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.75e-18,1;CL:0002581,1.03e-17,1;CL:0000159,9.46e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.84e-14;5 | |||
|ontology_enrichment_disease=DOID:2394!1.50e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3030;3.75e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.75e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0002118!3.65e-07!5;UBERON:0004532!3.65e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;5.07e-34;2!UBERON:0002046;1.84e-14;5!UBERON:0000974;4.81e-12;6!UBERON:0005406;1.71e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,3.62e-34,2;UBERON:0002046,1.84e-14,5;UBERON:0004117,1.84e-14,5;UBERON:0007689,1.84e-14,5;UBERON:0007123,1.84e-14,5;UBERON:0003091,1.84e-14,5;UBERON:0005406,1.57e-09,2;UBERON:0000974,1.29e-07,10;UBERON:0009722,4.57e-07,11;UBERON:0007690,4.57e-07,11 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.229240217243854,0.410502947249729,0.393553906568396,0,0,0,0.919421224478927,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.860509862246441,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,2.0994328148232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0.415941723061614,0.356857977594324,0.315404830067869,0.35142424497814,0,0,1.03473071292505,0,0.184369168541703,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0.918515585316854,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0.953150969619124,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.848432591722276,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0,0.369254416383208,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,6.83062910471503,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0.407992870545287,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0.251567901752575,3.55924488638614,0.457680136793847,0.151230923763239,0.621748802331122,0.295710299979268,0,0,0.155262956876259,0.414706207840855,0.53168342911599,0,0.450772826991655,0.761610424337591,0.406870733204662,0.181848659202559,0.322231671127465,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0.694567422971502,1.46842022703881,0,0.617602894321944,0.438568099157414,0.176689145945881,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,8.11050598887274,0,0,0,0,0,0.552317850755522,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,1.49263787330687,22.8541854205191,0,0.0620747142958579,0.560659312903067,7.76495330993612,34.3599221228973,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p9@SLC12A8 | |||
}} |
Revision as of 21:17, 12 September 2013
Short description: | p9@SLC12A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SLC12A8_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | -391bp_to_ENST00000461616_5end |
EntrezGene: | SLC12A8 |
HGNC: | 15595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.75e-18 | 1 |
perirenal preadipocyte | 1.03e-17 | 1 |
seromucus secreting cell | 9.46e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
throat | 3.62e-34 | 2 |
thyroid gland | 1.84e-14 | 5 |
pharyngeal pouch | 1.84e-14 | 5 |
thyroid diverticulum | 1.84e-14 | 5 |
pharyngeal pouch 2 | 1.84e-14 | 5 |
thyroid primordium | 1.84e-14 | 5 |
perirenal fat | 1.57e-09 | 2 |
neck | 1.29e-07 | 10 |
entire pharyngeal arch endoderm | 4.57e-07 | 11 |
early pharyngeal endoderm | 4.57e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.75e-18 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.