FFCP PHASE1:Mm9::chr12:110004200..110004205,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:110004200..110004205,-|id=chr12:110004200..110004205,-|ontology_enrichment_celltype=CL:0000988!1.22e-11!32;CL:0002032!1.22e-11!32;CL:0000037!1.22e-11!32;CL:0000566!1.22e-11!32;CL:0000837!1.22e-11!32;CL:0000838!2.21e-10!12;CL:0000542!1.65e-09!13;CL:0000051!1.65e-09!13;CL:0002320!1.25e-08!46;CL:0000134!1.25e-08!46;CL:0000084!1.52e-08!11;CL:0000827!1.52e-08!11;CL:0000791!9.72e-08!9;CL:0000789!9.72e-08!9;CL:0002420!9.72e-08!9;CL:0002419!9.72e-08!9;CL:0000790!9.72e-08!9;CL:0002031!3.19e-07!25;CL:0000063!4.41e-07!66;CL:0000034!4.78e-07!97;CL:0000738!4.79e-07!17;CL:0002087!4.79e-07!17;CL:0000219!6.22e-07!54|ontology_enrichment_celltype_v019_2=CL:0000355,2.54e-13,9|ontology_enrichment_disease=DOID:0060100!4.16e-10!3;DOID:4045!4.16e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.79e-38,3;DOID:4045,2.79e-38,3;DOID:0050686,1.37e-19,6|ontology_enrichment_uberon=UBERON:0002370!2.76e-10!23;UBERON:0000974!2.76e-10!23;UBERON:0004807!2.76e-10!23;UBERON:0005058!2.76e-10!23;UBERON:0003351!2.76e-10!23;UBERON:0009113!2.76e-10!23;UBERON:0003295!2.76e-10!23;UBERON:0009722!2.76e-10!23;UBERON:0005562!2.76e-10!23;UBERON:0007690!2.76e-10!23;UBERON:0006562!8.87e-10!24;UBERON:0003408!8.87e-10!24;UBERON:0001557!8.87e-10!24;UBERON:0001042!8.87e-10!24;UBERON:0008814!8.87e-10!24;UBERON:0009145!8.87e-10!24;UBERON:0004177!2.31e-09!29;UBERON:0002390!6.95e-09!45;UBERON:0003061!6.95e-09!45;UBERON:0002384!1.25e-08!46;UBERON:0000072!1.75e-08!27;UBERON:0002193!3.77e-08!48;UBERON:0000490!1.70e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.54e-13,9;UBERON:0002036,2.54e-13,9;UBERON:0002385,2.54e-13,9;UBERON:0000486,2.54e-13,9;UBERON:0007503,2.54e-13,9;UBERON:0001015,2.54e-13,9;UBERON:0002329,2.54e-13,9;UBERON:0003082,2.54e-13,9;UBERON:0003059,2.54e-13,9;UBERON:0007282,2.54e-13,9;UBERON:0004290,2.54e-13,9;UBERON:0009618,2.54e-13,9;UBERON:0000383,4.61e-12,10;UBERON:0007524,4.96e-11,11;UBERON:0003077,4.96e-11,11;UBERON:0007285,4.96e-11,11|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0,0,1.02720437958723,0.34968160967599,0,0,0,0.157731082679119,0.137114433605739,0,0,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,10.4632907684227,5.4693474116666,14.6586648312664,18.8234076169925,5.46436387966757,4.36959317728038,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0.360586348559907,0,0.201932899896295,0.15241361331,0.302478555410522,0,0.384847366561318,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:110004200..110004205,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:110004200..110004205,- | |||
|id=chr12:110004200..110004205,- | |||
|ontology_enrichment_celltype=CL:0000988!1.22e-11!32;CL:0002032!1.22e-11!32;CL:0000037!1.22e-11!32;CL:0000566!1.22e-11!32;CL:0000837!1.22e-11!32;CL:0000838!2.21e-10!12;CL:0000542!1.65e-09!13;CL:0000051!1.65e-09!13;CL:0002320!1.25e-08!46;CL:0000134!1.25e-08!46;CL:0000084!1.52e-08!11;CL:0000827!1.52e-08!11;CL:0000791!9.72e-08!9;CL:0000789!9.72e-08!9;CL:0002420!9.72e-08!9;CL:0002419!9.72e-08!9;CL:0000790!9.72e-08!9;CL:0002031!3.19e-07!25;CL:0000063!4.41e-07!66;CL:0000034!4.78e-07!97;CL:0000738!4.79e-07!17;CL:0002087!4.79e-07!17;CL:0000219!6.22e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.54e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!4.16e-10!3;DOID:4045!4.16e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.79e-38,3;DOID:4045,2.79e-38,3;DOID:0050686,1.37e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.76e-10!23;UBERON:0000974!2.76e-10!23;UBERON:0004807!2.76e-10!23;UBERON:0005058!2.76e-10!23;UBERON:0003351!2.76e-10!23;UBERON:0009113!2.76e-10!23;UBERON:0003295!2.76e-10!23;UBERON:0009722!2.76e-10!23;UBERON:0005562!2.76e-10!23;UBERON:0007690!2.76e-10!23;UBERON:0006562!8.87e-10!24;UBERON:0003408!8.87e-10!24;UBERON:0001557!8.87e-10!24;UBERON:0001042!8.87e-10!24;UBERON:0008814!8.87e-10!24;UBERON:0009145!8.87e-10!24;UBERON:0004177!2.31e-09!29;UBERON:0002390!6.95e-09!45;UBERON:0003061!6.95e-09!45;UBERON:0002384!1.25e-08!46;UBERON:0000072!1.75e-08!27;UBERON:0002193!3.77e-08!48;UBERON:0000490!1.70e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.54e-13,9;UBERON:0002036,2.54e-13,9;UBERON:0002385,2.54e-13,9;UBERON:0000486,2.54e-13,9;UBERON:0007503,2.54e-13,9;UBERON:0001015,2.54e-13,9;UBERON:0002329,2.54e-13,9;UBERON:0003082,2.54e-13,9;UBERON:0003059,2.54e-13,9;UBERON:0007282,2.54e-13,9;UBERON:0004290,2.54e-13,9;UBERON:0009618,2.54e-13,9;UBERON:0000383,4.61e-12,10;UBERON:0007524,4.96e-11,11;UBERON:0003077,4.96e-11,11;UBERON:0007285,4.96e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0,0,1.02720437958723,0.34968160967599,0,0,0,0.157731082679119,0.137114433605739,0,0,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,10.4632907684227,5.4693474116666,14.6586648312664,18.8234076169925,5.46436387966757,4.36959317728038,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0.360586348559907,0,0.201932899896295,0.15241361331,0.302478555410522,0,0.384847366561318,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:110004200..110004205,- | |||
}} |
Revision as of 22:11, 12 September 2013
Short description: | p@chr12:110004200..110004205, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:110004200..110004205, - |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.54e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.54e-13 | 9 |
striated muscle tissue | 2.54e-13 | 9 |
muscle tissue | 2.54e-13 | 9 |
multilaminar epithelium | 2.54e-13 | 9 |
epithelial vesicle | 2.54e-13 | 9 |
musculature | 2.54e-13 | 9 |
somite | 2.54e-13 | 9 |
myotome | 2.54e-13 | 9 |
presomitic mesoderm | 2.54e-13 | 9 |
presumptive segmental plate | 2.54e-13 | 9 |
dermomyotome | 2.54e-13 | 9 |
trunk paraxial mesoderm | 2.54e-13 | 9 |
musculature of body | 4.61e-12 | 10 |
dense mesenchyme tissue | 4.96e-11 | 11 |
paraxial mesoderm | 4.96e-11 | 11 |
presumptive paraxial mesoderm | 4.96e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.79e-38 | 3 |
muscle cancer | 2.79e-38 | 3 |
organ system cancer | 1.37e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.