FFCP PHASE1:Mm9::chr12:111326146..111326190,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=568|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:111326146..111326190,-|id=chr12:111326146..111326190,-|ontology_enrichment_celltype=CL:0000680!6.92e-14!6;CL:0000183!6.92e-14!6;CL:0000187!6.92e-14!6;CL:0000056!6.92e-14!6;CL:0000222!8.62e-12!7;CL:0000355!5.39e-09!9;CL:0002494!6.26e-08!3;CL:0000737!6.26e-08!3;CL:0000746!6.26e-08!3;CL:0000513!6.26e-08!3;CL:0000192!1.44e-07!3;CL:0000359!1.44e-07!3;CL:0002539!1.44e-07!3;CL:0000514!1.44e-07!3|ontology_enrichment_celltype_v019_2=CL:0002494,1.28e-18,3;CL:0000737,1.28e-18,3;CL:0000746,1.28e-18,3;CL:0000513,1.28e-18,3;CL:0002293,1.21e-09,3;CL:0000680,1.27e-09,6;CL:0000187,1.27e-09,6;CL:0000056,1.27e-09,6;CL:0000222,2.51e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!9.14e-17!7;UBERON:0006858!9.14e-17!7;UBERON:0002342!1.55e-14!10;UBERON:0005062!1.55e-14!10;UBERON:0000383!1.07e-10!10;UBERON:0001134!5.39e-09!9;UBERON:0002036!5.39e-09!9;UBERON:0002385!5.39e-09!9;UBERON:0000486!5.39e-09!9;UBERON:0001015!5.39e-09!9;UBERON:0004290!5.39e-09!9;UBERON:0003082!5.39e-09!9;UBERON:0003064!8.76e-08!14;UBERON:0001135!1.44e-07!3;UBERON:0004237!1.44e-07!3;UBERON:0004695!1.44e-07!3;UBERON:0002111!1.44e-07!3;UBERON:0004178!1.44e-07!3;UBERON:0002329!3.24e-07!11;UBERON:0003077!3.24e-07!11;UBERON:0003059!3.24e-07!11;UBERON:0007282!3.24e-07!11;UBERON:0009618!3.24e-07!11;UBERON:0007285!3.24e-07!11;UBERON:0005157!7.91e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002369,5.99e-32,7;UBERON:0006858,5.99e-32,7;UBERON:0003064,6.96e-16,14;UBERON:0005256,3.12e-10,45;UBERON:0003104,2.73e-07,61;UBERON:0009142,2.73e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.506884656097573,0.550640256485045,0,0,0,0,0,0,0,0,0,2.05807548828758,1.71920063963254,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.832988126665025,0.0755715601067855,0,0,0,0,0,0,0,8.862376774059,8.57293815189467,6.00677276667578,0,11.5493829672886,2.54805239706646,0,0,0,0,0,0,4.30482203287992,0.346970653532272,2.13125834818499,2.53677046981664,4.97384713823654,2.82212897125692,2.01066546127481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:111326146..111326190,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=568 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:111326146..111326190,- | |||
|id=chr12:111326146..111326190,- | |||
|ontology_enrichment_celltype=CL:0000680!6.92e-14!6;CL:0000183!6.92e-14!6;CL:0000187!6.92e-14!6;CL:0000056!6.92e-14!6;CL:0000222!8.62e-12!7;CL:0000355!5.39e-09!9;CL:0002494!6.26e-08!3;CL:0000737!6.26e-08!3;CL:0000746!6.26e-08!3;CL:0000513!6.26e-08!3;CL:0000192!1.44e-07!3;CL:0000359!1.44e-07!3;CL:0002539!1.44e-07!3;CL:0000514!1.44e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.28e-18,3;CL:0000737,1.28e-18,3;CL:0000746,1.28e-18,3;CL:0000513,1.28e-18,3;CL:0002293,1.21e-09,3;CL:0000680,1.27e-09,6;CL:0000187,1.27e-09,6;CL:0000056,1.27e-09,6;CL:0000222,2.51e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!9.14e-17!7;UBERON:0006858!9.14e-17!7;UBERON:0002342!1.55e-14!10;UBERON:0005062!1.55e-14!10;UBERON:0000383!1.07e-10!10;UBERON:0001134!5.39e-09!9;UBERON:0002036!5.39e-09!9;UBERON:0002385!5.39e-09!9;UBERON:0000486!5.39e-09!9;UBERON:0001015!5.39e-09!9;UBERON:0004290!5.39e-09!9;UBERON:0003082!5.39e-09!9;UBERON:0003064!8.76e-08!14;UBERON:0001135!1.44e-07!3;UBERON:0004237!1.44e-07!3;UBERON:0004695!1.44e-07!3;UBERON:0002111!1.44e-07!3;UBERON:0004178!1.44e-07!3;UBERON:0002329!3.24e-07!11;UBERON:0003077!3.24e-07!11;UBERON:0003059!3.24e-07!11;UBERON:0007282!3.24e-07!11;UBERON:0009618!3.24e-07!11;UBERON:0007285!3.24e-07!11;UBERON:0005157!7.91e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,5.99e-32,7;UBERON:0006858,5.99e-32,7;UBERON:0003064,6.96e-16,14;UBERON:0005256,3.12e-10,45;UBERON:0003104,2.73e-07,61;UBERON:0009142,2.73e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.506884656097573,0.550640256485045,0,0,0,0,0,0,0,0,0,2.05807548828758,1.71920063963254,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.832988126665025,0.0755715601067855,0,0,0,0,0,0,0,8.862376774059,8.57293815189467,6.00677276667578,0,11.5493829672886,2.54805239706646,0,0,0,0,0,0,4.30482203287992,0.346970653532272,2.13125834818499,2.53677046981664,4.97384713823654,2.82212897125692,2.01066546127481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:111326146..111326190,- | |||
}} |
Revision as of 22:16, 12 September 2013
Short description: | p@chr12:111326146..111326190, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:111326146..111326190, - |
Coexpression cluster: | MCL_coexpression_mm9:568 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.28e-18 | 3 |
striated muscle cell | 1.28e-18 | 3 |
cardiac muscle cell | 1.28e-18 | 3 |
cardiac muscle myoblast | 1.28e-18 | 3 |
epithelial cell of thymus | 1.21e-09 | 3 |
muscle precursor cell | 1.27e-09 | 6 |
muscle cell | 1.27e-09 | 6 |
myoblast | 1.27e-09 | 6 |
mesodermal cell | 2.51e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 5.99e-32 | 7 |
adrenal/interrenal gland | 5.99e-32 | 7 |
intermediate mesoderm | 6.96e-16 | 14 |
trunk mesenchyme | 3.12e-10 | 45 |
mesenchyme | 2.73e-07 | 61 |
entire embryonic mesenchyme | 2.73e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.