FFCP PHASE1:Mm9::chr12:34000355..34000366,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:34000355..34000366,+|id=chr12:34000355..34000366,+|ontology_enrichment_celltype=CL:0000988!8.95e-12!32;CL:0002032!8.95e-12!32;CL:0000037!8.95e-12!32;CL:0000566!8.95e-12!32;CL:0000837!8.95e-12!32;CL:0000838!1.82e-09!12;CL:0000542!1.42e-08!13;CL:0000051!1.42e-08!13;CL:0000084!2.13e-08!11;CL:0000827!2.13e-08!11;CL:0002320!1.09e-07!46;CL:0000134!1.09e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,6.58e-12,9;CL:0000789,6.58e-12,9;CL:0002420,6.58e-12,9;CL:0002419,6.58e-12,9;CL:0000790,6.58e-12,9;CL:0000084,1.04e-09,11;CL:0000827,1.04e-09,11;CL:0000838,6.99e-09,12;CL:0000624,7.27e-09,8;CL:0000542,3.50e-08,13;CL:0000051,3.50e-08,13;CL:0000988,1.79e-07,32;CL:0002032,1.79e-07,32;CL:0000037,1.79e-07,32;CL:0000837,1.79e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.43e-14,3;DOID:4045,2.43e-14,3;DOID:0050686,2.15e-07,6|ontology_enrichment_uberon=UBERON:0002370!6.24e-11!23;UBERON:0000974!6.24e-11!23;UBERON:0004807!6.24e-11!23;UBERON:0005058!6.24e-11!23;UBERON:0003351!6.24e-11!23;UBERON:0009113!6.24e-11!23;UBERON:0003295!6.24e-11!23;UBERON:0009722!6.24e-11!23;UBERON:0005562!6.24e-11!23;UBERON:0007690!6.24e-11!23;UBERON:0002390!2.16e-10!45;UBERON:0003061!2.16e-10!45;UBERON:0006562!2.59e-10!24;UBERON:0003408!2.59e-10!24;UBERON:0001557!2.59e-10!24;UBERON:0001042!2.59e-10!24;UBERON:0008814!2.59e-10!24;UBERON:0009145!2.59e-10!24;UBERON:0002193!2.22e-09!48;UBERON:0004177!4.90e-09!29;UBERON:0000072!9.62e-09!27;UBERON:0002384!1.09e-07!46;UBERON:0000065!7.65e-07!41|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0.16787927191189,0,3.87369970324729,0.281577444303333,0,0,0,8.9024379564227,5.07038334030185,0,0.404950534779652,0,0.946386496074713,0,0,0.850432901510698,0.198581902401771,0.783599367416806,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0.204169356262369,23.0192396905299,16.4080422349998,10.470474879476,21.7645650571475,31.4200923080885,10.6812277666854,0,0,0,0,0,0,0,0,0,0.503347818173209,3.62681071005672,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0.958520996047362,1.79970819298022,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,2.05878325691772,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0.188368457004691,0,0,1.18984900995699,1.25956307091292,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,7.32800820289447,0,0,0,0,0.168956125490778,0,0,0,1.20792060413003,2.59227005632079,0.632022241256357,0,0.205421914329655,0.51968329191118,0.537080087002444,1.39076948346885,0.240390899039938,0.295379054349154,0.100966449948148,0.381034033274999,0,0.682205165178267,0.192423683280659,1.40252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr12:34000355..34000366,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:34000355..34000366,+ | |||
|id=chr12:34000355..34000366,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.95e-12!32;CL:0002032!8.95e-12!32;CL:0000037!8.95e-12!32;CL:0000566!8.95e-12!32;CL:0000837!8.95e-12!32;CL:0000838!1.82e-09!12;CL:0000542!1.42e-08!13;CL:0000051!1.42e-08!13;CL:0000084!2.13e-08!11;CL:0000827!2.13e-08!11;CL:0002320!1.09e-07!46;CL:0000134!1.09e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.58e-12,9;CL:0000789,6.58e-12,9;CL:0002420,6.58e-12,9;CL:0002419,6.58e-12,9;CL:0000790,6.58e-12,9;CL:0000084,1.04e-09,11;CL:0000827,1.04e-09,11;CL:0000838,6.99e-09,12;CL:0000624,7.27e-09,8;CL:0000542,3.50e-08,13;CL:0000051,3.50e-08,13;CL:0000988,1.79e-07,32;CL:0002032,1.79e-07,32;CL:0000037,1.79e-07,32;CL:0000837,1.79e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.43e-14,3;DOID:4045,2.43e-14,3;DOID:0050686,2.15e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!6.24e-11!23;UBERON:0000974!6.24e-11!23;UBERON:0004807!6.24e-11!23;UBERON:0005058!6.24e-11!23;UBERON:0003351!6.24e-11!23;UBERON:0009113!6.24e-11!23;UBERON:0003295!6.24e-11!23;UBERON:0009722!6.24e-11!23;UBERON:0005562!6.24e-11!23;UBERON:0007690!6.24e-11!23;UBERON:0002390!2.16e-10!45;UBERON:0003061!2.16e-10!45;UBERON:0006562!2.59e-10!24;UBERON:0003408!2.59e-10!24;UBERON:0001557!2.59e-10!24;UBERON:0001042!2.59e-10!24;UBERON:0008814!2.59e-10!24;UBERON:0009145!2.59e-10!24;UBERON:0002193!2.22e-09!48;UBERON:0004177!4.90e-09!29;UBERON:0000072!9.62e-09!27;UBERON:0002384!1.09e-07!46;UBERON:0000065!7.65e-07!41 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,3.87369970324729,0.281577444303333,0,0,0,8.9024379564227,5.07038334030185,0,0.404950534779652,0,0.946386496074713,0,0,0.850432901510698,0.198581902401771,0.783599367416806,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0.204169356262369,23.0192396905299,16.4080422349998,10.470474879476,21.7645650571475,31.4200923080885,10.6812277666854,0,0,0,0,0,0,0,0,0,0.503347818173209,3.62681071005672,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0.958520996047362,1.79970819298022,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,2.05878325691772,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0.188368457004691,0,0,1.18984900995699,1.25956307091292,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,7.32800820289447,0,0,0,0,0.168956125490778,0,0,0,1.20792060413003,2.59227005632079,0.632022241256357,0,0.205421914329655,0.51968329191118,0.537080087002444,1.39076948346885,0.240390899039938,0.295379054349154,0.100966449948148,0.381034033274999,0,0.682205165178267,0.192423683280659,1.40252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr12:34000355..34000366,+ | |||
}} |
Revision as of 22:44, 12 September 2013
Short description: | p@chr12:34000355..34000366, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:34000355..34000366, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.58e-12 | 9 |
alpha-beta T cell | 6.58e-12 | 9 |
immature T cell | 6.58e-12 | 9 |
mature T cell | 6.58e-12 | 9 |
immature alpha-beta T cell | 6.58e-12 | 9 |
T cell | 1.04e-09 | 11 |
pro-T cell | 1.04e-09 | 11 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 12 |
CD4-positive, alpha-beta T cell | 7.27e-09 | 8 |
lymphocyte | 3.50e-08 | 13 |
common lymphoid progenitor | 3.50e-08 | 13 |
hematopoietic cell | 1.79e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.79e-07 | 32 |
hematopoietic stem cell | 1.79e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.79e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.43e-14 | 3 |
muscle cancer | 2.43e-14 | 3 |
organ system cancer | 2.15e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.