FFCP PHASE1:Hg19::chr3:187870838..187870852,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4026|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6679|TSSclassifier=W|UniProt=C9JUT4|association_with_transcript=-219bp_to_ENST00000448637_5end|description=CAGE_peak_9_at_LPP_5end|id=chr3:187870838..187870852,+|ontology_enrichment_celltype=CL:0002009!3.22e-11!65;CL:0002194!3.21e-10!63;CL:0000576!3.21e-10!63;CL:0000040!3.21e-10!63;CL:0000559!3.21e-10!63;CL:0000557!7.11e-10!71;CL:0000766!1.77e-09!76;CL:0000839!8.87e-08!70;CL:0000860!1.48e-07!45;CL:0002057!2.18e-07!42|ontology_enrichment_celltype_v019=CL:0000840;4.46e-10;5|ontology_enrichment_celltype_v019_2=CL:0002009,3.29e-11,61;CL:0000557,9.47e-11,67;CL:0000840,4.89e-10,5;CL:0001029,4.89e-10,5;CL:0002194,2.72e-09,59;CL:0000576,2.72e-09,59;CL:0000040,2.72e-09,59;CL:0000559,2.72e-09,59;CL:0000766,1.65e-08,72;CL:0000839,8.76e-08,66|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.61e-09!80;UBERON:0000062!2.35e-08!511;UBERON:0004765!7.94e-08!101;UBERON:0001434!7.94e-08!101;UBERON:0001474!1.53e-07!86;UBERON:0000468!9.60e-07!659|ontology_enrichment_uberon_v019=UBERON:0000160;2.55e-11;17!UBERON:0005409;5.67e-10;22!UBERON:0000059;2.79e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.66e-11,17;UBERON:0002371,1.39e-10,76;UBERON:0001474,2.43e-09,82;UBERON:0005409,1.46e-08,25;UBERON:0004765,5.81e-08,90;UBERON:0002405,1.64e-07,93;UBERON:0000059,2.72e-07,11;UBERON:0002390,7.93e-07,98;UBERON:0003061,7.93e-07,98|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0,0,2.53299878168311,0.631719873426831,0.261185628199839,0.737201809504527,0,3.9319446983431,0.527533956456907,0.247532705920093,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.410623275218653,0.251085279189606,0,0,0,0.786728553697808,1.15148819429164,0.309632246632152,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0.434021741431704,1.11957737119962,0,1.03030227053675,0.145398238779565,0,0.485168122375632,0.697287110717054,1.6446715520873,1.23882548358041,0.28769239232215,1.2808035326455,0.709446689665756,1.03423704220986,1.29096936716765,0,0.564727018627814,0.545812300115692,0.674170453335254,1.22433556948361,0.641858054152187,0,1.31940520074686,1.59570926097305,0.426224750532694,0,0,0.622822248995575,1.25624332628372,1.0429658368404,0.868755378820466,0.605399502633369,1.47311054395026,0.949387162322653,0.633765858935825,0.850417199860174,1.04829322754188,0,0.750884464207532,1.44653028027372,0.285012743741249,1.19350006319454,0.91332076882317,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.822189523018381,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0.221729397462564,0.175669571386252,0.392937226493138,0,0,9.08732702233113,8.18409765306556,6.24902414438666,0.238490624305342,0,0,0,0,0,0,0,0,0,0.775250277507987,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.529636723252875,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0.468642863667593,0.936480230490962,0,0.149448680551801,0.117434498643765,0.485618833104395,0.702254033511242,0.204154171254893,0.491337269247072,0.413303124703062,0,0,0,0,0.168336113954066,0.375355559615893,0.554128230968366,0.438977620880838,0.30648779579902,0.600952235626387,0,1.97328599257748,0.213557388818567,0,0.600182192168805,0.103052529238439,0.257640540045629,0.558350568994769,1.35021065793013,0.584622030967192,0.504867548488229,0.276149695926898,0,0.710019185033229,0.403008392910561,0.508681776931463,1.35282597214308,0.818238361772504,0.860413786167011,0.609868530647977,0.530119073285941,0.69716365721711,0.310983165046111,1.00928340350251,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.354920400119532,0.168584690078102,0,0.220587945464788,0.435758888184812,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0,3.32068784066407,0.171567810298526,0.439001141634502,1.1240175325762,0.301586917234893,0.185176890317059,0,0,0,0,0.70445216541493,0,0.462985512576611,0.190254152234598,0,0,1.72351904261178,0.936017060556951,2.67536092119711,0.93733833986777,0.839910640994298,0.567100388969546,0.268675568108545,0.290633938513962,0,0,0,0,0.432359860250884,0,0.126995788584338,0,0,0,0.102827492703324,0,1.14330573052231,0.336393253036082,0,0.2933531432838,1.03417372606222,3.57656445851882,0,0.26593811658487,1.04007436911366,1.02882949704857,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0.271265023699736,0.831883446123229,0.356857977594324,0.157702415033935,0.1171414149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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6679 | |||
|TSSclassifier=W | |||
|UniProt=C9JUT4 | |||
|association_with_transcript=-219bp_to_ENST00000448637_5end | |||
|description=CAGE_peak_9_at_LPP_5end | |||
|id=chr3:187870838..187870852,+ | |||
|ontology_enrichment_celltype=CL:0002009!3.22e-11!65;CL:0002194!3.21e-10!63;CL:0000576!3.21e-10!63;CL:0000040!3.21e-10!63;CL:0000559!3.21e-10!63;CL:0000557!7.11e-10!71;CL:0000766!1.77e-09!76;CL:0000839!8.87e-08!70;CL:0000860!1.48e-07!45;CL:0002057!2.18e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000840;4.46e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,3.29e-11,61;CL:0000557,9.47e-11,67;CL:0000840,4.89e-10,5;CL:0001029,4.89e-10,5;CL:0002194,2.72e-09,59;CL:0000576,2.72e-09,59;CL:0000040,2.72e-09,59;CL:0000559,2.72e-09,59;CL:0000766,1.65e-08,72;CL:0000839,8.76e-08,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.61e-09!80;UBERON:0000062!2.35e-08!511;UBERON:0004765!7.94e-08!101;UBERON:0001434!7.94e-08!101;UBERON:0001474!1.53e-07!86;UBERON:0000468!9.60e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.55e-11;17!UBERON:0005409;5.67e-10;22!UBERON:0000059;2.79e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.66e-11,17;UBERON:0002371,1.39e-10,76;UBERON:0001474,2.43e-09,82;UBERON:0005409,1.46e-08,25;UBERON:0004765,5.81e-08,90;UBERON:0002405,1.64e-07,93;UBERON:0000059,2.72e-07,11;UBERON:0002390,7.93e-07,98;UBERON:0003061,7.93e-07,98 | |||
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| |||
|short_description=p9@LPP | |||
}} |
Revision as of 23:14, 12 September 2013
Short description: | p9@LPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_LPP_5end |
Coexpression cluster: | NA |
Association with transcript: | -219bp_to_ENST00000448637_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | C9JUT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 3.29e-11 | 61 |
granulocyte monocyte progenitor cell | 9.47e-11 | 67 |
immature conventional dendritic cell | 4.89e-10 | 5 |
common dendritic progenitor | 4.89e-10 | 5 |
monopoietic cell | 2.72e-09 | 59 |
monocyte | 2.72e-09 | 59 |
monoblast | 2.72e-09 | 59 |
promonocyte | 2.72e-09 | 59 |
myeloid leukocyte | 1.65e-08 | 72 |
myeloid lineage restricted progenitor cell | 8.76e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.66e-11 | 17 |
bone marrow | 1.39e-10 | 76 |
bone element | 2.43e-09 | 82 |
gastrointestinal system | 1.46e-08 | 25 |
skeletal element | 5.81e-08 | 90 |
immune system | 1.64e-07 | 93 |
large intestine | 2.72e-07 | 11 |
hematopoietic system | 7.93e-07 | 98 |
blood island | 7.93e-07 | 98 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.