FFCP PHASE1:Mm9::chr12:80309891..80309910,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77974|HGNC=|MCL_coexpression_id=3|UniProt=Q8BYK4|association_with_transcript=0bp_to_ENSMUST00000021548,NM_030017,uc007oab.1,uc007oac.1,uc011yog.1_5end|description=CAGE_peak_1_at_Rdh12_5end|id=chr12:80309891..80309910,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=20.0186058880992,0,0.454999239389536,0,0,0,0.233612640595526,5.16493293766305,1.83025338797167,1.87251621057595,0.171217968225505,0.398860794976682,2.39681021903688,4.02133851127388,2.6648780945253,3.64455481301687,2.09868563438444,14.8267217718372,13.9856722277854,19.9463136345074,1.7008658030214,0.397163804803541,0,2.3998863419011,1.60586496747019,0,0,0.215471232685889,0.570070258369122,0.504060259519861,1.33038306393183,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,380.863783970586,228.14992060095,198.41549896607,432.938375190826,406.412063550275,232.073948748891,1.1330713617802,0.405507724878058,0.734187008646726,0.782391344348039,0.65407546914134,0.659058548203415,0.972149495371417,1.39986421625363,0,18.7916518784665,2.17608642603403,8.06625117941913,0.771778308107841,0.573066879877513,1.54701627683233,0.202316460859598,1.05798195854407,0,0.677689064138264,4.4464739805557,0,0,2.1314403448383,0.898800331555214,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.489963196859816,0.287536413054709,0,0,0.766124028511126,0.153606533256243,0.263772575460388,0.365950574409639,0,1.3959149950069,0,1.06958773443767,0,0.284743361598206,0,0.151452386666368,0.226714680320357,1.44932244350839,0,0,0,0,0,3.7919993435573,0,0,0,11.2674735821344,1.28326477414318,0,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,2.16949371466214,12.9468941823586,0.148442139064825,0.173485326766136,1.52232739156071,0.230615497256059,0.301445281105245,0.823120949949934,0.251333182659351,4.94389935468748,1.01219549843938,15.9229899350977,0.161766849947409,3.75430581382669,2.90925151881133,1.86391761218122,0.878342391034642,0.83778682725382,0.255457055208591,1.55759661857696,3.59941638596045,1.52484272487678,1.19832511523858,1.83000241127451,0.125654352112864,0.695297280769106,0.511430914660661,0.83115217823824,1.1356888414743,1.42575109390443,9.33052279575698,10.108910337347,87.5438120487732,0.650602214813519,0.459804208866946,2.88099407688559,6.17889753126432,0.95251098811859,2.8185018462667,4.96619140166563,287.936851632524,0.862271971731369,1.32374256117473,2.11141348996739,4.82230611340665,28.0827721717854,55.3720944770245,67.2907586053975,0.59710280045548,2.1066395619397,3.86021860672073,5.39910648851626,0.621377317606506,0.234526059981096,0.540186184383045,1.18372367792605,0.787056926989615,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.658239399653922,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,1.89260953707715,0.514523061896422,0,0.528901133327089,1.06644125267617,1.39342003116263,0.902072229254653,0.80673409849337,0.444756087689741,0,0.474529061544512,0,0.502670417600539,1.59165177632921,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.569003702859245,0.799739588268102,1.1270773567308,1.01825663922657,2.71533482034676,5.19005067188357,3.92066530170395,5.75679577120448,3.45397201251025,1.23397163921801,0.592905254174298,0,0,0.449724224769707,1.01430060694251,2.17059443777175,2.5462585178142,3.45235364940973,1.29708181420028,1.09824565275233,0,0.744281895337007,1.24815069245824,0,0.179397413521912,0.482443521363367,1.47802552133284,0.947457058852424,0.651859905768103,1.18821560042632,0.938760993154008,1.50755631697634,0.714130922658041,0.390267295715598,0.472905432318573,1.32878813789265,0.478364305972461,7.20998584749247,0.518054945597687,2.16973587872267,0,0.54390568381871,0.983528546038072,0.551873492609465,1.28440471990234,1.05490517932983,2.13115428989678,0.757412781613119,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0,0.395287777946524,1.28528526568723,1.70328102249922,1.42452482933804,0.977321756121456,0.494910368917606,0,0.728341908464944,0,0.377210159511796,1.18120757152309,1.53717573971964,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,6.12791290356818,1.8006109403131,2.58717367565509,1.92903331528433,2.6601035046341,1.78368817602071,1.48094118541909,2.43571959291679,3.52007562095566,4.66030555900404,0.661585194164886,33.8016818530034,49.569578995643,39.8065304525829,49.897639793311,47.9291427255579,0.291480836629851,2.03967832211561,5.29699730473343,3.92135049130123,8.51894825900674,3.01389531207506,3.14396723758358,1.60144721244566,5.94924504978494,7.83728133012485,4.97519905695926,42.005507192665,0.949007980743406,5.28630614529807,26.1372924788759,69.8354908688326,65.5087691238533,63.2513784544809,38.8471241909079,59.4185988303747,0.518459893167171,0.62133931308692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| ||
|EntrezGene=77974 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q8BYK4 | |||
|association_with_transcript=0bp_to_ENSMUST00000021548,NM_030017,uc007oab.1,uc007oac.1,uc011yog.1_5end | |||
|description=CAGE_peak_1_at_Rdh12_5end | |||
|id=chr12:80309891..80309910,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=20.0186058880992,0,0.454999239389536,0,0,0,0.233612640595526,5.16493293766305,1.83025338797167,1.87251621057595,0.171217968225505,0.398860794976682,2.39681021903688,4.02133851127388,2.6648780945253,3.64455481301687,2.09868563438444,14.8267217718372,13.9856722277854,19.9463136345074,1.7008658030214,0.397163804803541,0,2.3998863419011,1.60586496747019,0,0,0.215471232685889,0.570070258369122,0.504060259519861,1.33038306393183,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,380.863783970586,228.14992060095,198.41549896607,432.938375190826,406.412063550275,232.073948748891,1.1330713617802,0.405507724878058,0.734187008646726,0.782391344348039,0.65407546914134,0.659058548203415,0.972149495371417,1.39986421625363,0,18.7916518784665,2.17608642603403,8.06625117941913,0.771778308107841,0.573066879877513,1.54701627683233,0.202316460859598,1.05798195854407,0,0.677689064138264,4.4464739805557,0,0,2.1314403448383,0.898800331555214,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.489963196859816,0.287536413054709,0,0,0.766124028511126,0.153606533256243,0.263772575460388,0.365950574409639,0,1.3959149950069,0,1.06958773443767,0,0.284743361598206,0,0.151452386666368,0.226714680320357,1.44932244350839,0,0,0,0,0,3.7919993435573,0,0,0,11.2674735821344,1.28326477414318,0,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,2.16949371466214,12.9468941823586,0.148442139064825,0.173485326766136,1.52232739156071,0.230615497256059,0.301445281105245,0.823120949949934,0.251333182659351,4.94389935468748,1.01219549843938,15.9229899350977,0.161766849947409,3.75430581382669,2.90925151881133,1.86391761218122,0.878342391034642,0.83778682725382,0.255457055208591,1.55759661857696,3.59941638596045,1.52484272487678,1.19832511523858,1.83000241127451,0.125654352112864,0.695297280769106,0.511430914660661,0.83115217823824,1.1356888414743,1.42575109390443,9.33052279575698,10.108910337347,87.5438120487732,0.650602214813519,0.459804208866946,2.88099407688559,6.17889753126432,0.95251098811859,2.8185018462667,4.96619140166563,287.936851632524,0.862271971731369,1.32374256117473,2.11141348996739,4.82230611340665,28.0827721717854,55.3720944770245,67.2907586053975,0.59710280045548,2.1066395619397,3.86021860672073,5.39910648851626,0.621377317606506,0.234526059981096,0.540186184383045,1.18372367792605,0.787056926989615,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.658239399653922,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,1.89260953707715,0.514523061896422,0,0.528901133327089,1.06644125267617,1.39342003116263,0.902072229254653,0.80673409849337,0.444756087689741,0,0.474529061544512,0,0.502670417600539,1.59165177632921,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.569003702859245,0.799739588268102,1.1270773567308,1.01825663922657,2.71533482034676,5.19005067188357,3.92066530170395,5.75679577120448,3.45397201251025,1.23397163921801,0.592905254174298,0,0,0.449724224769707,1.01430060694251,2.17059443777175,2.5462585178142,3.45235364940973,1.29708181420028,1.09824565275233,0,0.744281895337007,1.24815069245824,0,0.179397413521912,0.482443521363367,1.47802552133284,0.947457058852424,0.651859905768103,1.18821560042632,0.938760993154008,1.50755631697634,0.714130922658041,0.390267295715598,0.472905432318573,1.32878813789265,0.478364305972461,7.20998584749247,0.518054945597687,2.16973587872267,0,0.54390568381871,0.983528546038072,0.551873492609465,1.28440471990234,1.05490517932983,2.13115428989678,0.757412781613119,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0,0.395287777946524,1.28528526568723,1.70328102249922,1.42452482933804,0.977321756121456,0.494910368917606,0,0.728341908464944,0,0.377210159511796,1.18120757152309,1.53717573971964,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,6.12791290356818,1.8006109403131,2.58717367565509,1.92903331528433,2.6601035046341,1.78368817602071,1.48094118541909,2.43571959291679,3.52007562095566,4.66030555900404,0.661585194164886,33.8016818530034,49.569578995643,39.8065304525829,49.897639793311,47.9291427255579,0.291480836629851,2.03967832211561,5.29699730473343,3.92135049130123,8.51894825900674,3.01389531207506,3.14396723758358,1.60144721244566,5.94924504978494,7.83728133012485,4.97519905695926,42.005507192665,0.949007980743406,5.28630614529807,26.1372924788759,69.8354908688326,65.5087691238533,63.2513784544809,38.8471241909079,59.4185988303747,0.518459893167171,0.621339313086926,0,0.149516546043979,0.66183396182839,0.972255941720238,0.774958940866387,0.844780627453891,0.821500670520278,0.2604087696879,0.314578033277133,0,0,2.8441000856536,1.82452693761148,1.54066435747241,1.16928740680016,1.9692936523423,2.98022032171897,1.44234539423963,1.9199638532695,2.01932899896295,2.66723823292499,2.11734988787365,2.72882066071307,2.21287235772758,2.33753804363138,69.1527670026395,0.221985953374065,0.0897138566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| |||
|short_description=p1@Rdh12 | |||
}} | |||
Revision as of 23:20, 12 September 2013
| Short description: | p1@Rdh12 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Rdh12_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3 |
| Association with transcript: | 0bp_to_ENSMUST00000021548, NM_030017, uc007oab.1, uc007oac.1, uc011yog.1_5end |
| EntrezGene: | Rdh12 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
