FFCP PHASE1:Hg19::chr3:27763807..27763822,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8320|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3372|TSSclassifier=S|UniProt=G3XAI5|association_with_transcript=-4bp_to_ENST00000449599_5end|coexpression_cluster_id=C98|description=CAGE_peak_1_at_EOMES_5end|id=chr3:27763807..27763822,-|ontology_enrichment_celltype=CL:0000738!1.27e-14!140;CL:0000084!7.09e-14!25;CL:0000827!7.09e-14!25;CL:0002087!1.93e-13!119;CL:0000791!1.37e-11!18;CL:0000789!1.37e-11!18;CL:0002420!1.37e-11!18;CL:0002419!1.37e-11!18;CL:0000790!1.37e-11!18;CL:0002031!2.10e-11!124;CL:0000838!1.97e-10!52;CL:0000037!2.45e-10!172;CL:0000566!2.45e-10!172;CL:0000625!2.93e-10!11;CL:0000542!5.94e-10!53;CL:0000051!5.94e-10!53;CL:0002032!1.17e-09!165;CL:0000837!1.17e-09!165;CL:0000988!1.94e-09!182|ontology_enrichment_celltype_v019=CL:0000084;1.09e-19;25!CL:0000625;9.08e-16;11!CL:0000791;2.38e-15;18!CL:0000789;2.38e-15;18!CL:0002419;2.38e-15;18!CL:0000542;5.78e-08;53|ontology_enrichment_celltype_v019_2=CL:0000084,9.08e-20,25;CL:0000827,9.08e-20,25;CL:0000625,9.49e-16,11;CL:0002087,1.02e-15,115;CL:0000838,1.26e-15,52;CL:0000791,1.85e-15,18;CL:0000789,1.85e-15,18;CL:0002420,1.85e-15,18;CL:0002419,1.85e-15,18;CL:0000790,1.85e-15,18;CL:0000738,2.45e-15,136;CL:0000542,3.90e-15,53;CL:0000051,3.90e-15,53;CL:0002031,5.87e-12,120;CL:0000037,1.16e-11,168;CL:0000988,1.05e-10,177;CL:0002032,2.96e-10,161;CL:0000837,2.96e-10,161|ontology_enrichment_development_v019=CL:0000790;2.38e-15;18!CL:0000051;5.78e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.48e-11!115;UBERON:0000178!5.56e-11!15;UBERON:0000179!5.56e-11!15;UBERON:0000463!5.56e-11!15;UBERON:0002390!1.23e-08!102;UBERON:0003061!1.23e-08!102;UBERON:0002193!2.56e-07!112|ontology_enrichment_uberon_v019=UBERON:0000178;1.57e-13;15!UBERON:0000179;1.57e-13;15!UBERON:0000463;1.57e-13;15!UBERON:0002390;2.82e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.47e-13,15;UBERON:0000179,1.47e-13,15;UBERON:0000463,1.47e-13,15;UBERON:0002390,4.91e-08,98;UBERON:0003061,4.91e-08,98;UBERON:0002193,1.35e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.410623275218653,0,57.4628811224594,82.5110923971955,80.9933939717759,3.93364276848904,8.82807615623589,1.85779347979291,0.919421224478927,0,0,0,0,0,3.32397245119126,2.60707781711184,2.17010870715852,3.80656306207871,8.42123531649347,2.83333124397605,1.30858414901608,0.377875943688809,0.242584061187816,1.62700325833979,0.822335776043652,0.309706370895104,0.863077176966451,0.512321413058201,0.47296445977717,2.06847408441971,1.29096936716765,0,1.50593871634084,0.818718450173537,0.224723484445085,2.44867113896722,0.641858054152187,0,0.329851300186716,1.39624560335142,0,1.45104619314292,1.13477044938228,1.24564449799115,1.25624332628372,0,0,1.81619850790011,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,0,2.24203425192614,0,0.786839080455332,1.96505381374582,2.46721798799411,0,0.651844533267181,0.473447805734733,0,4.34500781852177,0,0,0,2.68991771423918,1.69077151827842,1.64437904603676,4.42160028457357,1.15921234294021,0.14828656316206,0.267540828089713,0,8.49820070231746,24.9093320841249,15.4632350467183,13.4100436770337,67.8544332510326,84.6408490013344,77.9370676447667,38.0955051266765,51.4506176840762,84.9528940555952,65.1137443121046,81.2916716951836,25.2008429030916,38.7788283886086,25.6339194872554,0,0,0,0,0,0,0,0.486634870302636,0,0,0,2.35762335895883,0,0,0.97364218096405,1.0447784237956,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0.121973706129595,2.12047629314376,1.97529702878181,0.932949495138334,2.01856680700503,1.82488679537915,0,0,0,0,0,0.591534000199219,0.674338760312407,0.964044119533928,0.661763836394364,0.653638332277218,0.474541238222193,0.674156540800822,0.784885860501384,0.38474715694639,0,0,0,0,0,5.89696330006576,1.77236972004421,4.85609409356116,0.122988438543114,0,0.658501712451753,0,0.402115889646523,0.0925884451585296,0,0,0,1.507095264676,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,2.30029607499127,0,0.264145302039678,0.207328115540772,0,0,0.761974731506028,1.52795370223311,0,1.71072446022705,0.822619941626588,0.901029173531752,4.28739648945867,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0.144781306667579,0,0,57.7238491566666,16.5505838569619,13.1532820664306,15.0161352447306,2.03275699377971,5.20559415430487,7.73288812777695,0.502548796003046,5.74144876487847,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.2707210449155,2.5885704098234,11.3131211271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7823,0|short_description=p1@EOMES}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8320 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3372 | |||
|TSSclassifier=S | |||
|UniProt=G3XAI5 | |||
|association_with_transcript=-4bp_to_ENST00000449599_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_1_at_EOMES_5end | |||
|id=chr3:27763807..27763822,- | |||
|ontology_enrichment_celltype=CL:0000738!1.27e-14!140;CL:0000084!7.09e-14!25;CL:0000827!7.09e-14!25;CL:0002087!1.93e-13!119;CL:0000791!1.37e-11!18;CL:0000789!1.37e-11!18;CL:0002420!1.37e-11!18;CL:0002419!1.37e-11!18;CL:0000790!1.37e-11!18;CL:0002031!2.10e-11!124;CL:0000838!1.97e-10!52;CL:0000037!2.45e-10!172;CL:0000566!2.45e-10!172;CL:0000625!2.93e-10!11;CL:0000542!5.94e-10!53;CL:0000051!5.94e-10!53;CL:0002032!1.17e-09!165;CL:0000837!1.17e-09!165;CL:0000988!1.94e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.09e-19;25!CL:0000625;9.08e-16;11!CL:0000791;2.38e-15;18!CL:0000789;2.38e-15;18!CL:0002419;2.38e-15;18!CL:0000542;5.78e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,9.08e-20,25;CL:0000827,9.08e-20,25;CL:0000625,9.49e-16,11;CL:0002087,1.02e-15,115;CL:0000838,1.26e-15,52;CL:0000791,1.85e-15,18;CL:0000789,1.85e-15,18;CL:0002420,1.85e-15,18;CL:0002419,1.85e-15,18;CL:0000790,1.85e-15,18;CL:0000738,2.45e-15,136;CL:0000542,3.90e-15,53;CL:0000051,3.90e-15,53;CL:0002031,5.87e-12,120;CL:0000037,1.16e-11,168;CL:0000988,1.05e-10,177;CL:0002032,2.96e-10,161;CL:0000837,2.96e-10,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.38e-15;18!CL:0000051;5.78e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.48e-11!115;UBERON:0000178!5.56e-11!15;UBERON:0000179!5.56e-11!15;UBERON:0000463!5.56e-11!15;UBERON:0002390!1.23e-08!102;UBERON:0003061!1.23e-08!102;UBERON:0002193!2.56e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.57e-13;15!UBERON:0000179;1.57e-13;15!UBERON:0000463;1.57e-13;15!UBERON:0002390;2.82e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.47e-13,15;UBERON:0000179,1.47e-13,15;UBERON:0000463,1.47e-13,15;UBERON:0002390,4.91e-08,98;UBERON:0003061,4.91e-08,98;UBERON:0002193,1.35e-07,108 | |||
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| |||
|short_description=p1@EOMES | |||
}} |
Revision as of 23:46, 12 September 2013
Short description: | p1@EOMES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_EOMES_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -4bp_to_ENST00000449599_5end |
EntrezGene: | EOMES |
HGNC: | 3372 |
UniProt: | G3XAI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 9.08e-20 | 25 |
pro-T cell | 9.08e-20 | 25 |
CD8-positive, alpha-beta T cell | 9.49e-16 | 11 |
nongranular leukocyte | 1.02e-15 | 115 |
lymphoid lineage restricted progenitor cell | 1.26e-15 | 52 |
mature alpha-beta T cell | 1.85e-15 | 18 |
alpha-beta T cell | 1.85e-15 | 18 |
immature T cell | 1.85e-15 | 18 |
mature T cell | 1.85e-15 | 18 |
immature alpha-beta T cell | 1.85e-15 | 18 |
leukocyte | 2.45e-15 | 136 |
lymphocyte | 3.90e-15 | 53 |
common lymphoid progenitor | 3.90e-15 | 53 |
hematopoietic lineage restricted progenitor cell | 5.87e-12 | 120 |
hematopoietic stem cell | 1.16e-11 | 168 |
hematopoietic cell | 1.05e-10 | 177 |
hematopoietic oligopotent progenitor cell | 2.96e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.96e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.47e-13 | 15 |
haemolymphatic fluid | 1.47e-13 | 15 |
organism substance | 1.47e-13 | 15 |
hematopoietic system | 4.91e-08 | 98 |
blood island | 4.91e-08 | 98 |
hemolymphoid system | 1.35e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.