FFCP PHASE1:Mm9::chr13:29042426..29042441,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=667|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:29042426..29042441,-|id=chr13:29042426..29042441,-|ontology_enrichment_celltype=CL:0000393!1.10e-09!39;CL:0000211!1.10e-09!39;CL:0000540!3.61e-08!33;CL:0000047!3.61e-08!33;CL:0000031!3.61e-08!33;CL:0000404!3.61e-08!33;CL:0000055!1.12e-07!50;CL:0000221!7.81e-07!44;CL:0000133!7.81e-07!44;CL:0002319!8.89e-07!43|ontology_enrichment_celltype_v019_2=CL:0000393,7.88e-13,39;CL:0000211,7.88e-13,39;CL:0000540,2.44e-12,33;CL:0000047,2.44e-12,33;CL:0000031,2.44e-12,33;CL:0000404,2.44e-12,33;CL:0000117,2.09e-11,23;CL:0000337,2.09e-11,23;CL:0002319,3.09e-11,43;CL:0000221,8.86e-11,44;CL:0000133,8.86e-11,44;CL:0002321,1.70e-08,70;CL:0002609,3.08e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.55e-07,75;UBERON:0001017,9.59e-07,73|phase1_expression=2.24208385946712,0,0,0,0,0,0.233612640595526,0.129123323441576,0.703943610758334,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.17008658030214,1.29078236561151,0.783599367416806,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0.866554859253824,0,0.204169356262369,0,0,0,0,0,0,2.26614272356039,1.4192770370732,4.77221555620372,0,1.09012578190223,0,0,0.55994568650145,0,0,0.725362142011344,0,0.771778308107841,0.85960031981627,0.515672092277442,3.64169629547276,6.34789175126439,3.80298842103708,0.338844532069132,0,0.449949858640699,0,0,1.49800055259202,0.384218305321555,11.509546966241,9.18040380655497,7.15104868594699,0.285650984403804,2.42955395046775,4.28717797252339,7.95517409451362,17.4651569455904,1.10115880999389,0,0.153606533256243,4.2203612073662,5.76372154695181,6.77187381723788,0,0,0,1.17851434189467,1.56608848879013,3.16879057903011,1.66597625333005,1.20914496170857,1.15945795480671,0,0,0,0,0,0.421333260395256,0.511290967734173,0.259786004602869,1.06001872353102,0.704217098883403,0,0,0,3.46385665617943,3.29367825117628,2.52762222507392,0,0,0.148442139064825,0.867426633830679,0.913396434936424,0.230615497256059,0.60289056221049,0.587943535678524,0.376999773989026,0.741584903203122,0.144599356919912,0,0.485300549842228,0.662524555381181,0,0,0.292780797011547,0,0.255457055208591,1.55759661857696,0,1.14363204365758,0,0,2.76439574648302,0,0.511430914660661,0,0.162241263067758,1.2220723662038,0.373220911830279,0.505445516867349,0,0.780722657776222,1.37941262660084,0.720248519221397,2.26057226753573,1.42876648217788,1.7935920839879,2.43624483855295,0.258703370739016,0.862271971731369,0.945530400839096,1.75951124163949,0.219195732427575,1.66828349535359,0.696504333044333,1.23469281844766,1.59227413454795,0,0,0.284163499395593,0.621377317606506,1.40715635988658,1.08037236876609,0.473489471170421,0,0.925602677324269,1.16266972375204,0.804820204198858,2.56883753207773,1.6455984991348,1.47750717671186,0.405344047729279,0.584799949701329,0.219550115291051,0.671032093801859,0.420579897128254,2.88132914661996,0,0,1.2797295032114,0.928946687441754,0.38660238396628,0,0.667134131534611,0.760902504450237,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0.758671603812327,1.14248512609729,0,0,0.581857461502877,0.631222379012867,1.01178459398812,0,0.31399745568275,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0.554259570499814,1.51593129416388,1.14075483509418,1.35796068620151,1.64283173801951,0.837531287209079,0,0.195133647857799,0.945810864637146,1.32878813789265,2.07291199254733,1.14704320301017,1.89953480052485,0.867894351489069,0,0,0.491764273019036,0.275936746304732,0,0,1.63934945376675,0.252470927204373,1.26203287766503,1.95219372148319,0.861693590931196,0.716906393857656,1.11399337041197,0.283076530788832,0.404810701674894,1.75353514746787,1.18586333383957,0,0.567760340833074,0.712262414669021,0.325773918707152,1.31976098378028,0,2.18502572539483,0.906970670894253,0.565815239267694,0.590603785761546,0.614870295887855,0.516856586336442,2.54473610634254,0.712994756769443,0.316036757935816,0,0,1.02131881726136,1.98067203434441,1.4229455216103,1.28602221018955,1.59606210278046,0.535106452806212,1.48094118541909,0.913394847343798,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.361877549568935,0.596861720015682,0.328281799490123,0.291480836629851,0,0,0.619160603889667,0.185194527369712,0,0.136694227721025,0,0.509935289981566,1.25956307091292,0.690999869022119,0,0.632671987162271,1.42323626988794,0.648032044930808,1.04544148007234,0.87345025498471,0.674321731924103,0.41326727862668,0,0.259229946583586,0.621339313086926,0,0.747582730219894,0.827292452285488,1.16670713006429,0.645799117388655,0.675824501963113,2.46450201156083,0.911430693907651,0.734015410979976,0,0,0,1.41907650703115,1.02710957164827,1.03936658382236,0.358053391334963,0.993406773906324,0.841368146639782,1.03382669022204,0.706765149637033,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=667 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:29042426..29042441,- | |||
|id=chr13:29042426..29042441,- | |||
|ontology_enrichment_celltype=CL:0000393!1.10e-09!39;CL:0000211!1.10e-09!39;CL:0000540!3.61e-08!33;CL:0000047!3.61e-08!33;CL:0000031!3.61e-08!33;CL:0000404!3.61e-08!33;CL:0000055!1.12e-07!50;CL:0000221!7.81e-07!44;CL:0000133!7.81e-07!44;CL:0002319!8.89e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.88e-13,39;CL:0000211,7.88e-13,39;CL:0000540,2.44e-12,33;CL:0000047,2.44e-12,33;CL:0000031,2.44e-12,33;CL:0000404,2.44e-12,33;CL:0000117,2.09e-11,23;CL:0000337,2.09e-11,23;CL:0002319,3.09e-11,43;CL:0000221,8.86e-11,44;CL:0000133,8.86e-11,44;CL:0002321,1.70e-08,70;CL:0002609,3.08e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.55e-07,75;UBERON:0001017,9.59e-07,73 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0.233612640595526,0.129123323441576,0.703943610758334,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.17008658030214,1.29078236561151,0.783599367416806,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0.866554859253824,0,0.204169356262369,0,0,0,0,0,0,2.26614272356039,1.4192770370732,4.77221555620372,0,1.09012578190223,0,0,0.55994568650145,0,0,0.725362142011344,0,0.771778308107841,0.85960031981627,0.515672092277442,3.64169629547276,6.34789175126439,3.80298842103708,0.338844532069132,0,0.449949858640699,0,0,1.49800055259202,0.384218305321555,11.509546966241,9.18040380655497,7.15104868594699,0.285650984403804,2.42955395046775,4.28717797252339,7.95517409451362,17.4651569455904,1.10115880999389,0,0.153606533256243,4.2203612073662,5.76372154695181,6.77187381723788,0,0,0,1.17851434189467,1.56608848879013,3.16879057903011,1.66597625333005,1.20914496170857,1.15945795480671,0,0,0,0,0,0.421333260395256,0.511290967734173,0.259786004602869,1.06001872353102,0.704217098883403,0,0,0,3.46385665617943,3.29367825117628,2.52762222507392,0,0,0.148442139064825,0.867426633830679,0.913396434936424,0.230615497256059,0.60289056221049,0.587943535678524,0.376999773989026,0.741584903203122,0.144599356919912,0,0.485300549842228,0.662524555381181,0,0,0.292780797011547,0,0.255457055208591,1.55759661857696,0,1.14363204365758,0,0,2.76439574648302,0,0.511430914660661,0,0.162241263067758,1.2220723662038,0.373220911830279,0.505445516867349,0,0.780722657776222,1.37941262660084,0.720248519221397,2.26057226753573,1.42876648217788,1.7935920839879,2.43624483855295,0.258703370739016,0.862271971731369,0.945530400839096,1.75951124163949,0.219195732427575,1.66828349535359,0.696504333044333,1.23469281844766,1.59227413454795,0,0,0.284163499395593,0.621377317606506,1.40715635988658,1.08037236876609,0.473489471170421,0,0.925602677324269,1.16266972375204,0.804820204198858,2.56883753207773,1.6455984991348,1.47750717671186,0.405344047729279,0.584799949701329,0.219550115291051,0.671032093801859,0.420579897128254,2.88132914661996,0,0,1.2797295032114,0.928946687441754,0.38660238396628,0,0.667134131534611,0.760902504450237,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0.758671603812327,1.14248512609729,0,0,0.581857461502877,0.631222379012867,1.01178459398812,0,0.31399745568275,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0.554259570499814,1.51593129416388,1.14075483509418,1.35796068620151,1.64283173801951,0.837531287209079,0,0.195133647857799,0.945810864637146,1.32878813789265,2.07291199254733,1.14704320301017,1.89953480052485,0.867894351489069,0,0,0.491764273019036,0.275936746304732,0,0,1.63934945376675,0.252470927204373,1.26203287766503,1.95219372148319,0.861693590931196,0.716906393857656,1.11399337041197,0.283076530788832,0.404810701674894,1.75353514746787,1.18586333383957,0,0.567760340833074,0.712262414669021,0.325773918707152,1.31976098378028,0,2.18502572539483,0.906970670894253,0.565815239267694,0.590603785761546,0.614870295887855,0.516856586336442,2.54473610634254,0.712994756769443,0.316036757935816,0,0,1.02131881726136,1.98067203434441,1.4229455216103,1.28602221018955,1.59606210278046,0.535106452806212,1.48094118541909,0.913394847343798,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.361877549568935,0.596861720015682,0.328281799490123,0.291480836629851,0,0,0.619160603889667,0.185194527369712,0,0.136694227721025,0,0.509935289981566,1.25956307091292,0.690999869022119,0,0.632671987162271,1.42323626988794,0.648032044930808,1.04544148007234,0.87345025498471,0.674321731924103,0.41326727862668,0,0.259229946583586,0.621339313086926,0,0.747582730219894,0.827292452285488,1.16670713006429,0.645799117388655,0.675824501963113,2.46450201156083,0.911430693907651,0.734015410979976,0,0,0,1.41907650703115,1.02710957164827,1.03936658382236,0.358053391334963,0.993406773906324,0.841368146639782,1.03382669022204,0.706765149637033,1.67654974641,1.10908803650525,1.94915761479505,0.962118416403295,1.16876902181569,0,0,0.0897138566094757,0,0.19318959403219,0.563047426353546,0.73260649706906,1.71494703263253,0.501572104035363,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0,0.51776031175182,2.17953429926771,1.19707462020309,1.19513524027894,1.45864030240976,2.09613162627982,1.47074806760011,0.44449345560323,0.206035057238894,0,0.505394423527595,0,0.754505365544305,0.0936415074698824,0.320125762024346,0.34461281373368,0.476293691283074,0.811190281613988,0.578727661391115,1.23625770240992,0.588795680537589,0.342869252385415,0.532427418478012,0.715308569841963,0.581385666529314,0.282328141245992,1.01537529470012,0.182927972872773,0.263069711437843,1.08643291076689,1.12228454331548,0.355905054372522,0.591026894253381,0,0.619747364743864,0.771626443924566,0.999242311751784,0.467863216890817,0,0,0.220591419119515,1.15933917810211 | |||
|short_description=p@chr13:29042426..29042441,- | |||
}} |
Revision as of 00:18, 13 September 2013
Short description: | p@chr13:29042426..29042441, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:29042426..29042441, - |
Coexpression cluster: | MCL_coexpression_mm9:667 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.88e-13 | 39 |
electrically active cell | 7.88e-13 | 39 |
neuron | 2.44e-12 | 33 |
neuronal stem cell | 2.44e-12 | 33 |
neuroblast | 2.44e-12 | 33 |
electrically signaling cell | 2.44e-12 | 33 |
CNS neuron (sensu Vertebrata) | 2.09e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.09e-11 | 23 |
neural cell | 3.09e-11 | 43 |
ectodermal cell | 8.86e-11 | 44 |
neurectodermal cell | 8.86e-11 | 44 |
embryonic cell | 1.70e-08 | 70 |
neuron of cerebral cortex | 3.08e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.55e-07 | 75 |
central nervous system | 9.59e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.