FFCP PHASE1:Mm9::chr13:52667956..52668000,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:52667956..52668000,-|id=chr13:52667956..52668000,-|ontology_enrichment_celltype=CL:0000049!1.37e-17!19;CL:0000988!2.16e-14!32;CL:0002032!2.16e-14!32;CL:0000037!2.16e-14!32;CL:0000566!2.16e-14!32;CL:0000837!2.16e-14!32;CL:0000763!2.98e-12!16;CL:0002320!1.29e-11!46;CL:0000134!1.29e-11!46;CL:0000553!1.59e-09!6;CL:0000556!1.59e-09!6;CL:0000219!3.01e-09!54;CL:0000034!8.97e-08!97;CL:0000557!1.06e-07!7;CL:0000839!1.30e-07!13;CL:0002031!5.45e-07!25;CL:0000063!8.42e-07!66|ontology_enrichment_celltype_v019_2=CL:0000049,1.16e-19,19;CL:0000988,1.49e-13,32;CL:0002032,1.49e-13,32;CL:0000037,1.49e-13,32;CL:0000837,1.49e-13,32;CL:0002320,1.49e-12,46;CL:0000134,1.49e-12,46;CL:0000034,6.52e-12,97;CL:0000763,1.58e-11,16;CL:0000553,4.43e-11,6;CL:0000556,4.43e-11,6;CL:0000219,2.32e-10,54;CL:0000723,1.09e-08,91;CL:0000048,1.09e-08,91;CL:0000839,1.40e-07,13;CL:0000050,2.00e-07,9|ontology_enrichment_disease=DOID:0060100!4.51e-08!3;DOID:4045!4.51e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.81e-13,3;DOID:4045,1.81e-13,3;DOID:0050686,5.92e-07,6|ontology_enrichment_uberon=UBERON:0002371!6.80e-15!16;UBERON:0002204!1.19e-12!32;UBERON:0001474!3.65e-12!22;UBERON:0004765!3.65e-12!22;UBERON:0001434!3.65e-12!22;UBERON:0002384!1.29e-11!46;UBERON:0002193!8.58e-08!48|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.12e-15,16;UBERON:0002204,1.54e-13,32;UBERON:0002384,1.49e-12,46;UBERON:0001474,1.56e-10,22;UBERON:0004765,1.56e-10,22;UBERON:0001434,1.56e-10,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.41732687172878,0,6.46697438984387,5.62169177783529,7.63901373236454,0,0.496454756004426,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,14.2300754450549,6.2506827561904,9.42342739152837,42.940898626264,30.0540013381716,14.5653105909346,0,0,0,0,0,0,0,0,0,10.2347389695219,0,0,0,0,0,0,0,0,0,0,0,0,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,2.39630249011841,6.59893004092748,2.92261522268049,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,2.1066395619397,2.57347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565105371014073,0.27338845544205,0,1.01987057996313,1.53946597556024,1.93479963326193,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:52667956..52668000,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:52667956..52668000,- | |||
|id=chr13:52667956..52668000,- | |||
|ontology_enrichment_celltype=CL:0000049!1.37e-17!19;CL:0000988!2.16e-14!32;CL:0002032!2.16e-14!32;CL:0000037!2.16e-14!32;CL:0000566!2.16e-14!32;CL:0000837!2.16e-14!32;CL:0000763!2.98e-12!16;CL:0002320!1.29e-11!46;CL:0000134!1.29e-11!46;CL:0000553!1.59e-09!6;CL:0000556!1.59e-09!6;CL:0000219!3.01e-09!54;CL:0000034!8.97e-08!97;CL:0000557!1.06e-07!7;CL:0000839!1.30e-07!13;CL:0002031!5.45e-07!25;CL:0000063!8.42e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.16e-19,19;CL:0000988,1.49e-13,32;CL:0002032,1.49e-13,32;CL:0000037,1.49e-13,32;CL:0000837,1.49e-13,32;CL:0002320,1.49e-12,46;CL:0000134,1.49e-12,46;CL:0000034,6.52e-12,97;CL:0000763,1.58e-11,16;CL:0000553,4.43e-11,6;CL:0000556,4.43e-11,6;CL:0000219,2.32e-10,54;CL:0000723,1.09e-08,91;CL:0000048,1.09e-08,91;CL:0000839,1.40e-07,13;CL:0000050,2.00e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!4.51e-08!3;DOID:4045!4.51e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.81e-13,3;DOID:4045,1.81e-13,3;DOID:0050686,5.92e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.80e-15!16;UBERON:0002204!1.19e-12!32;UBERON:0001474!3.65e-12!22;UBERON:0004765!3.65e-12!22;UBERON:0001434!3.65e-12!22;UBERON:0002384!1.29e-11!46;UBERON:0002193!8.58e-08!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.12e-15,16;UBERON:0002204,1.54e-13,32;UBERON:0002384,1.49e-12,46;UBERON:0001474,1.56e-10,22;UBERON:0004765,1.56e-10,22;UBERON:0001434,1.56e-10,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.41732687172878,0,6.46697438984387,5.62169177783529,7.63901373236454,0,0.496454756004426,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,14.2300754450549,6.2506827561904,9.42342739152837,42.940898626264,30.0540013381716,14.5653105909346,0,0,0,0,0,0,0,0,0,10.2347389695219,0,0,0,0,0,0,0,0,0,0,0,0,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,2.39630249011841,6.59893004092748,2.92261522268049,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,2.1066395619397,2.57347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565105371014073,0.27338845544205,0,1.01987057996313,1.53946597556024,1.93479963326193,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:52667956..52668000,- | |||
}} |
Revision as of 00:44, 13 September 2013
Short description: | p@chr13:52667956..52668000, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:52667956..52668000, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.16e-19 | 19 |
hematopoietic cell | 1.49e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.49e-13 | 32 |
hematopoietic stem cell | 1.49e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.49e-13 | 32 |
connective tissue cell | 1.49e-12 | 46 |
mesenchymal cell | 1.49e-12 | 46 |
stem cell | 6.52e-12 | 97 |
myeloid cell | 1.58e-11 | 16 |
megakaryocyte progenitor cell | 4.43e-11 | 6 |
megakaryocyte | 4.43e-11 | 6 |
motile cell | 2.32e-10 | 54 |
somatic stem cell | 1.09e-08 | 91 |
multi fate stem cell | 1.09e-08 | 91 |
myeloid lineage restricted progenitor cell | 1.40e-07 | 13 |
megakaryocyte-erythroid progenitor cell | 2.00e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.12e-15 | 16 |
musculoskeletal system | 1.54e-13 | 32 |
connective tissue | 1.49e-12 | 46 |
bone element | 1.56e-10 | 22 |
skeletal element | 1.56e-10 | 22 |
skeletal system | 1.56e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.81e-13 | 3 |
muscle cancer | 1.81e-13 | 3 |
organ system cancer | 5.92e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.