FFCP PHASE1:Mm9::chr13:99124757..99124764,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=286|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:99124757..99124764,+|id=chr13:99124757..99124764,+|ontology_enrichment_celltype=CL:0002453!7.86e-08!8|ontology_enrichment_celltype_v019_2=CL:0002453,3.57e-35,8;CL:0000333,2.53e-28,10;CL:0000095,2.53e-28,10;CL:0000243,2.53e-28,10;CL:0000123,2.53e-28,10;CL:0000125,2.53e-28,10;CL:0000030,2.53e-28,10;CL:0000339,2.53e-28,10;CL:0000128,6.93e-27,6;CL:0000126,6.93e-27,6;CL:0000127,6.93e-27,6;CL:0002603,3.37e-10,2;CL:0000708,4.13e-10,2;CL:0000878,7.56e-10,2;CL:0000129,7.56e-10,2;CL:0000219,1.10e-08,54;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3;CL:0002319,4.09e-07,43;CL:0000221,5.77e-07,44;CL:0000133,5.77e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!2.42e-21!8;UBERON:0003296!2.42e-21!8;UBERON:0010133!2.42e-21!8;UBERON:0001894!6.70e-17!10;UBERON:0006222!6.70e-17!10;UBERON:0001017!4.33e-08!73;UBERON:0005743!4.33e-08!73;UBERON:0000073!8.51e-08!75;UBERON:0001016!8.51e-08!75;UBERON:0002616!9.21e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0003210,4.13e-10,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5182615095686,0,0,0,3.21968769738334,1.43752564364972,0,0,0,0,0,0,0,0,0,0,4.4464739805557,0,0,0,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.646793418913773,0.428674070063185,0.177340233642274,0.713475270408282,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr13:99124757..99124764,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=286 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:99124757..99124764,+ | |||
|id=chr13:99124757..99124764,+ | |||
|ontology_enrichment_celltype=CL:0002453!7.86e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.57e-35,8;CL:0000333,2.53e-28,10;CL:0000095,2.53e-28,10;CL:0000243,2.53e-28,10;CL:0000123,2.53e-28,10;CL:0000125,2.53e-28,10;CL:0000030,2.53e-28,10;CL:0000339,2.53e-28,10;CL:0000128,6.93e-27,6;CL:0000126,6.93e-27,6;CL:0000127,6.93e-27,6;CL:0002603,3.37e-10,2;CL:0000708,4.13e-10,2;CL:0000878,7.56e-10,2;CL:0000129,7.56e-10,2;CL:0000219,1.10e-08,54;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3;CL:0002319,4.09e-07,43;CL:0000221,5.77e-07,44;CL:0000133,5.77e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!2.42e-21!8;UBERON:0003296!2.42e-21!8;UBERON:0010133!2.42e-21!8;UBERON:0001894!6.70e-17!10;UBERON:0006222!6.70e-17!10;UBERON:0001017!4.33e-08!73;UBERON:0005743!4.33e-08!73;UBERON:0000073!8.51e-08!75;UBERON:0001016!8.51e-08!75;UBERON:0002616!9.21e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,4.13e-10,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5182615095686,0,0,0,3.21968769738334,1.43752564364972,0,0,0,0,0,0,0,0,0,0,4.4464739805557,0,0,0,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.646793418913773,0.428674070063185,0.177340233642274,0.713475270408282,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr13:99124757..99124764,+ | |||
}} |
Revision as of 01:23, 13 September 2013
Short description: | p@chr13:99124757..99124764, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:99124757..99124764, + |
Coexpression cluster: | MCL_coexpression_mm9:286 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.57e-35 | 8 |
migratory neural crest cell | 2.53e-28 | 10 |
neuron associated cell | 2.53e-28 | 10 |
glial cell (sensu Vertebrata) | 2.53e-28 | 10 |
neuron associated cell (sensu Vertebrata) | 2.53e-28 | 10 |
glial cell | 2.53e-28 | 10 |
glioblast | 2.53e-28 | 10 |
glioblast (sensu Vertebrata) | 2.53e-28 | 10 |
oligodendrocyte | 6.93e-27 | 6 |
macroglial cell | 6.93e-27 | 6 |
astrocyte | 6.93e-27 | 6 |
astrocyte of the cerebellum | 3.37e-10 | 2 |
leptomeningeal cell | 4.13e-10 | 2 |
central nervous system macrophage | 7.56e-10 | 2 |
microglial cell | 7.56e-10 | 2 |
motile cell | 1.10e-08 | 54 |
secretory cell | 3.64e-07 | 3 |
stromal cell | 3.64e-07 | 3 |
extracellular matrix secreting cell | 3.64e-07 | 3 |
neural cell | 4.09e-07 | 43 |
ectodermal cell | 5.77e-07 | 44 |
neurectodermal cell | 5.77e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 4.13e-10 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.