FFCP PHASE1:Mm9::chr15:73342989..73343037,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=105841|HGNC=|MCL_coexpression_id=163|UniProt=A2RT67|association_with_transcript=0bp_to_ENSMUST00000043414,NM_001081066,uc007wce.1,uc011ztv.1_5end|description=CAGE_peak_1_at_Dennd3_5end|id=chr15:73342989..73343037,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.48e-15!59;UBERON:0000160!1.35e-14!43;UBERON:0001007!4.29e-14!128;UBERON:0001555!4.29e-14!128;UBERON:0007026!4.29e-14!128;UBERON:0004119!7.14e-14!130;UBERON:0000925!7.14e-14!130;UBERON:0006595!7.14e-14!130;UBERON:0004921!3.49e-13!126;UBERON:0004185!3.49e-13!126;UBERON:0003104!9.09e-07!131;UBERON:0009142!9.09e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.90e-11,47;UBERON:0000160,5.65e-11,31;UBERON:0001007,1.28e-10,116;UBERON:0001555,1.28e-10,116;UBERON:0007026,1.28e-10,116;UBERON:0004119,2.53e-10,118;UBERON:0000925,2.53e-10,118;UBERON:0006595,2.53e-10,118;UBERON:0004921,8.03e-10,114|phase1_expression=2.88267924788629,20.2405736430829,22.2949627300873,34.7833843002855,45.5815114251176,5.37213670118047,6.77476657727024,0.387369970324729,0.985521055061667,1.40438715793196,0.34243593645101,0.239316476986009,2.22560948910567,1.39872643870396,3.99731714178795,4.25198061518635,0.699561878128147,20.8205029136437,22.4867671113412,15.2780274647291,4.67738095830884,1.29078236561151,1.04479915655574,9.75953779039781,9.86459908588831,14.3557991028755,9.04600191934057,9.48073423817912,10.2612646506442,10.3332353201572,5.76499327703792,0,0.61506478758457,0,1.73310971850765,1.66234645358492,2.24586291888606,39.3419732892693,22.6587249911902,25.6526634547161,47.6467505305122,36.8844561877561,36.4132764773365,0.503587271902309,0.709638518536602,1.28482726513177,0,0.218025156380447,0,0.194429899074283,0.979904951377538,0,19.7983475148129,2.17608642603403,3.6970317905671,0,0,0.515672092277442,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,1.15265491596466,0.207379224616955,0.405017814995072,0.210324961351382,0.856952953211411,1.32521124570968,0,0.191690942036473,1.83843757322004,0,1.27687338085188,0.921639199537461,0.395658863190582,0.914876436024097,1.56274011167028,1.11673199600552,0.56276261003168,2.13917546887534,0.883885756421003,0.711858403995515,0.372798891650601,0.151452386666368,0.226714680320357,7.24661221754194,1.72084775396277,0,1.61910957491345,1.29955283489534,0.448026887097336,4.0728881838208,0.170430322578058,0,0,1.97180787687353,0,0,0,2.59789249213457,2.28023878927589,2.02209778005913,4.68153906848146,17.6077760880077,2.52351636410202,1.21439728736295,1.52232739156071,2.07553947530453,1.80867168663147,2.11659672844269,2.01066546127481,2.47194967734374,1.87979163995885,10.6153266233985,2.91180329905337,6.18356251689102,2.90925151881133,5.59175283654366,1.17112318804619,0.83778682725382,13.0283098156382,2.03685711660064,0.599902730993408,1.90605340609597,1.49790639404823,2.74500361691176,0.376963056338593,2.08589184230732,2.30143911597297,1.87009240103604,1.62241263067758,2.03678727700633,4.10543003013307,2.27450482590307,1.05220927943237,0.780722657776222,0.919608417733892,0.540186389416048,0.60281927134286,1.56483948048054,0.384341160854549,1.3118241438362,1.81092359517311,0.215567992932842,1.13463648100692,1.93546236580344,1.7535658594206,2.50242524303038,1.74126083261083,2.67516777330327,1.19420560091096,2.1066395619397,2.31613116403244,1.70498099637356,0.207125772535502,2.11073453982987,1.62055855314913,2.13070262026689,1.57411385397923,0.617068451549513,1.39520366850245,1.07309360559848,2.45207218971056,1.48103864922132,1.47750717671186,1.78351381000883,2.19299981137998,1.3173006917463,2.81833479396781,1.47202963994889,1.02904612379284,29.7376904685418,20.3626936330929,1.06644125267617,1.85789337488351,2.31961430379768,6.85723983719365,8.00560957841533,7.03834816616469,13.2868137232463,7.74085087202851,8.04272668160862,5.57078121715222,6.04388670069272,13.4822911298133,9.72621224436124,10.5544874824815,1.70701110857774,2.97046132785295,2.25415471346161,2.64746726198909,3.49114476901726,6.31222379012867,6.9560190836683,5.90440591918409,4.86696056308262,6.91024117962083,2.07516838961004,0.500535317148282,1.37591296579242,1.79889689907883,1.82574109249653,1.4470629585145,1.2731292589071,3.74004978686054,3.56697498905078,1.09824565275233,1.43768206527355,3.72140947668503,1.24815069245824,0.505157755894224,2.15276896226295,1.92977408545347,11.4546977903295,1.51593129416388,1.95557971730431,1.86719594352707,3.05097322775053,6.70025029767263,11.4260947625287,9.75668239288994,6.14777062014145,7.75126413770712,9.40783135079174,6.55453258862952,10.1884139300878,9.40218880779825,0,1.08781136763742,7.86822836830458,4.13905119457099,0.642202359951168,1.99259867206745,0.327869890753351,1.00988370881749,0.315508219416257,1.56175497718655,1.29254038639679,0,0.222798674082394,0.849229592366497,0,0.584511715822624,0.395287777946524,1.92792789853084,2.55492153374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| ||
|EntrezGene=105841 | |||
|HGNC= | |||
|MCL_coexpression_id=163 | |||
|UniProt=A2RT67 | |||
|association_with_transcript=0bp_to_ENSMUST00000043414,NM_001081066,uc007wce.1,uc011ztv.1_5end | |||
|description=CAGE_peak_1_at_Dennd3_5end | |||
|id=chr15:73342989..73343037,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.48e-15!59;UBERON:0000160!1.35e-14!43;UBERON:0001007!4.29e-14!128;UBERON:0001555!4.29e-14!128;UBERON:0007026!4.29e-14!128;UBERON:0004119!7.14e-14!130;UBERON:0000925!7.14e-14!130;UBERON:0006595!7.14e-14!130;UBERON:0004921!3.49e-13!126;UBERON:0004185!3.49e-13!126;UBERON:0003104!9.09e-07!131;UBERON:0009142!9.09e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.90e-11,47;UBERON:0000160,5.65e-11,31;UBERON:0001007,1.28e-10,116;UBERON:0001555,1.28e-10,116;UBERON:0007026,1.28e-10,116;UBERON:0004119,2.53e-10,118;UBERON:0000925,2.53e-10,118;UBERON:0006595,2.53e-10,118;UBERON:0004921,8.03e-10,114 | |||
|phase1_expression=2.88267924788629,20.2405736430829,22.2949627300873,34.7833843002855,45.5815114251176,5.37213670118047,6.77476657727024,0.387369970324729,0.985521055061667,1.40438715793196,0.34243593645101,0.239316476986009,2.22560948910567,1.39872643870396,3.99731714178795,4.25198061518635,0.699561878128147,20.8205029136437,22.4867671113412,15.2780274647291,4.67738095830884,1.29078236561151,1.04479915655574,9.75953779039781,9.86459908588831,14.3557991028755,9.04600191934057,9.48073423817912,10.2612646506442,10.3332353201572,5.76499327703792,0,0.61506478758457,0,1.73310971850765,1.66234645358492,2.24586291888606,39.3419732892693,22.6587249911902,25.6526634547161,47.6467505305122,36.8844561877561,36.4132764773365,0.503587271902309,0.709638518536602,1.28482726513177,0,0.218025156380447,0,0.194429899074283,0.979904951377538,0,19.7983475148129,2.17608642603403,3.6970317905671,0,0,0.515672092277442,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,1.15265491596466,0.207379224616955,0.405017814995072,0.210324961351382,0.856952953211411,1.32521124570968,0,0.191690942036473,1.83843757322004,0,1.27687338085188,0.921639199537461,0.395658863190582,0.914876436024097,1.56274011167028,1.11673199600552,0.56276261003168,2.13917546887534,0.883885756421003,0.711858403995515,0.372798891650601,0.151452386666368,0.226714680320357,7.24661221754194,1.72084775396277,0,1.61910957491345,1.29955283489534,0.448026887097336,4.0728881838208,0.170430322578058,0,0,1.97180787687353,0,0,0,2.59789249213457,2.28023878927589,2.02209778005913,4.68153906848146,17.6077760880077,2.52351636410202,1.21439728736295,1.52232739156071,2.07553947530453,1.80867168663147,2.11659672844269,2.01066546127481,2.47194967734374,1.87979163995885,10.6153266233985,2.91180329905337,6.18356251689102,2.90925151881133,5.59175283654366,1.17112318804619,0.83778682725382,13.0283098156382,2.03685711660064,0.599902730993408,1.90605340609597,1.49790639404823,2.74500361691176,0.376963056338593,2.08589184230732,2.30143911597297,1.87009240103604,1.62241263067758,2.03678727700633,4.10543003013307,2.27450482590307,1.05220927943237,0.780722657776222,0.919608417733892,0.540186389416048,0.60281927134286,1.56483948048054,0.384341160854549,1.3118241438362,1.81092359517311,0.215567992932842,1.13463648100692,1.93546236580344,1.7535658594206,2.50242524303038,1.74126083261083,2.67516777330327,1.19420560091096,2.1066395619397,2.31613116403244,1.70498099637356,0.207125772535502,2.11073453982987,1.62055855314913,2.13070262026689,1.57411385397923,0.617068451549513,1.39520366850245,1.07309360559848,2.45207218971056,1.48103864922132,1.47750717671186,1.78351381000883,2.19299981137998,1.3173006917463,2.81833479396781,1.47202963994889,1.02904612379284,29.7376904685418,20.3626936330929,1.06644125267617,1.85789337488351,2.31961430379768,6.85723983719365,8.00560957841533,7.03834816616469,13.2868137232463,7.74085087202851,8.04272668160862,5.57078121715222,6.04388670069272,13.4822911298133,9.72621224436124,10.5544874824815,1.70701110857774,2.97046132785295,2.25415471346161,2.64746726198909,3.49114476901726,6.31222379012867,6.9560190836683,5.90440591918409,4.86696056308262,6.91024117962083,2.07516838961004,0.500535317148282,1.37591296579242,1.79889689907883,1.82574109249653,1.4470629585145,1.2731292589071,3.74004978686054,3.56697498905078,1.09824565275233,1.43768206527355,3.72140947668503,1.24815069245824,0.505157755894224,2.15276896226295,1.92977408545347,11.4546977903295,1.51593129416388,1.95557971730431,1.86719594352707,3.05097322775053,6.70025029767263,11.4260947625287,9.75668239288994,6.14777062014145,7.75126413770712,9.40783135079174,6.55453258862952,10.1884139300878,9.40218880779825,0,1.08781136763742,7.86822836830458,4.13905119457099,0.642202359951168,1.99259867206745,0.327869890753351,1.00988370881749,0.315508219416257,1.56175497718655,1.29254038639679,0,0.222798674082394,0.849229592366497,0,0.584511715822624,0.395287777946524,1.92792789853084,2.55492153374884,1.24645922567079,2.60619134965722,3.62934270539578,10.619611067197,2.91336763385978,2.72091201268276,3.01768127609437,4.72483028609236,6.45613810682248,8.78656196771952,3.27180356529755,5.70395805415554,6.32073515871632,9.48767477174989,9.28219889233682,6.46835250932197,2.16073312837572,2.19909762430683,2.57204442037911,0.709360934569094,2.14042581122485,2.46823530903181,4.26250928760439,2.81606049676452,0.847328283455281,10.8058915046931,0.32977250588296,0.322928853391811,0.542816324353403,0.835606408021955,0.164140899745061,12.5336759750836,0.370850604021019,7.86006051670122,1.857481811669,2.03713980106683,2.0720530270516,4.51090951479383,8.92234875505438,4.41943917984024,2.6590775941495,3.17859939750175,3.81868247206045,1.10717597753397,2.64315307264903,2.48412283890143,1.46361807210128,4.14888871117737,1.48350781023303,2.97552440611209,4.4498510137285,6.61036363788144,9.32008969630389,3.94585057078933,0.299033092087958,1.15820943319968,0.777804753376191,1.29159823477731,1.520605129417,3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| |||
|short_description=p1@Dennd3 | |||
}} |
Revision as of 10:49, 13 September 2013
Short description: | p1@Dennd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dennd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:163 |
Association with transcript: | 0bp_to_ENSMUST00000043414, NM_001081066, uc007wce.1, uc011ztv.1_5end |
EntrezGene: | Dennd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.90e-11 | 47 |
intestine | 5.65e-11 | 31 |
digestive system | 1.28e-10 | 116 |
digestive tract | 1.28e-10 | 116 |
primitive gut | 1.28e-10 | 116 |
endoderm-derived structure | 2.53e-10 | 118 |
endoderm | 2.53e-10 | 118 |
presumptive endoderm | 2.53e-10 | 118 |
subdivision of digestive tract | 8.03e-10 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.