FFCP PHASE1:Mm9::chr15:74789738..74789763,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:74789738..74789763,-|id=chr15:74789738..74789763,-|ontology_enrichment_celltype=CL:0000988!3.29e-08!32;CL:0002032!3.29e-08!32;CL:0000037!3.29e-08!32;CL:0000566!3.29e-08!32;CL:0000837!3.29e-08!32;CL:0002320!5.05e-08!46;CL:0000134!5.05e-08!46;CL:0000063!1.98e-07!66;CL:0000049!3.90e-07!19|ontology_enrichment_celltype_v019_2=CL:0002320,1.02e-17,46;CL:0000134,1.02e-17,46;CL:0000049,6.91e-16,19;CL:0000988,2.83e-15,32;CL:0002032,2.83e-15,32;CL:0000037,2.83e-15,32;CL:0000837,2.83e-15,32;CL:0000219,1.36e-14,54;CL:0000763,1.47e-12,16;CL:0000068,6.51e-12,3;CL:0002202,6.51e-12,3;CL:0000069,6.51e-12,3;CL:0002632,6.51e-12,3;CL:0002368,6.51e-12,3;CL:0000307,6.51e-12,3;CL:0000377,6.51e-12,3;CL:0002092,9.42e-11,3;CL:0002540,9.42e-11,3;CL:0002031,1.28e-09,25;CL:0000723,1.84e-09,91;CL:0000048,1.84e-09,91;CL:0000553,4.21e-09,6;CL:0000556,4.21e-09,6;CL:0000839,6.39e-09,13;CL:0000034,1.21e-08,97;CL:0000557,3.38e-08,7;CL:0002476,4.89e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.64e-12!45;UBERON:0003061!2.64e-12!45;UBERON:0002193!9.44e-12!48;UBERON:0002371!1.66e-11!16;UBERON:0002405!2.05e-11!70;UBERON:0001474!1.25e-08!22;UBERON:0004765!1.25e-08!22;UBERON:0001434!1.25e-08!22;UBERON:0002384!5.05e-08!46;UBERON:0000926!3.93e-07!193;UBERON:0004120!3.93e-07!193;UBERON:0006603!3.93e-07!193;UBERON:0002530!9.37e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.76e-24,16;UBERON:0002384,1.02e-17,46;UBERON:0001474,8.83e-17,22;UBERON:0004765,8.83e-17,22;UBERON:0001434,8.83e-17,22;UBERON:0003126,6.51e-12,3;UBERON:0001005,6.51e-12,3;UBERON:0007196,6.51e-12,3;UBERON:0001558,6.51e-12,3;UBERON:0002204,6.73e-11,32;UBERON:0002390,3.61e-07,45;UBERON:0003061,3.61e-07,45|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0.34243593645101,0,0.856003649656029,0.0874204024189974,0.333109761815663,0.607425802169478,1.39912375625629,1.89277299214943,2.33094537129756,2.97072756258621,0,1.88652807281682,2.35079810225042,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0.418531630736908,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0.279972843250725,0,7.04686945442493,0,0.336093799142464,0.257259436035947,0,0,0,0.528990979272033,0,0.338844532069132,0,2.6996991518442,1.97773272513395,2.1314403448383,0.898800331555214,0,0,0,0,0,0.441737081903227,0,0,0,1.10115880999389,0,0,0,0,0,0.558365998002762,1.12552522006336,0.30559649555362,0.294628585473668,0.142371680799103,0,0.075726193333184,0,1.15945795480671,0,0,0.539703191637817,0,0,0,0,0,0,0.422530259330042,0,0,0,13.8554266247177,14.1881524666055,11.62706223534,0.11418387971906,0,0,0.867426633830679,0.304465478312141,0,1.50722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,1.31796636956512,0,1.01656181658452,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,2.1066395619397,0.257347907114715,3.12579849335152,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0.274561413188081,2.87536413054709,0,0.936113019343682,0.252578877947112,0,0.964887042726734,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.655453258862952,0.518054945597687,0.289298117163023,9.04747703635634,2.17562273527484,1.96705709207614,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.376736914009382,0,0.457556346413045,0.169978429993855,0.559805809294632,0.138199973804424,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0,0,0.259229946583586,3.10669656543463,0,0,0,0,0.387479470433193,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0.316011120628178,0.405450430580328,0.616265742988964,0.51968329191118,0,0,0.721172697119813,0.590758108698309,0.908698049533329,0.457240839929999,0.302478555410522,0.38983152295901,0.577271049841977,0.818138315270983,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:74789738..74789763,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:74789738..74789763,- | |||
|id=chr15:74789738..74789763,- | |||
|ontology_enrichment_celltype=CL:0000988!3.29e-08!32;CL:0002032!3.29e-08!32;CL:0000037!3.29e-08!32;CL:0000566!3.29e-08!32;CL:0000837!3.29e-08!32;CL:0002320!5.05e-08!46;CL:0000134!5.05e-08!46;CL:0000063!1.98e-07!66;CL:0000049!3.90e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.02e-17,46;CL:0000134,1.02e-17,46;CL:0000049,6.91e-16,19;CL:0000988,2.83e-15,32;CL:0002032,2.83e-15,32;CL:0000037,2.83e-15,32;CL:0000837,2.83e-15,32;CL:0000219,1.36e-14,54;CL:0000763,1.47e-12,16;CL:0000068,6.51e-12,3;CL:0002202,6.51e-12,3;CL:0000069,6.51e-12,3;CL:0002632,6.51e-12,3;CL:0002368,6.51e-12,3;CL:0000307,6.51e-12,3;CL:0000377,6.51e-12,3;CL:0002092,9.42e-11,3;CL:0002540,9.42e-11,3;CL:0002031,1.28e-09,25;CL:0000723,1.84e-09,91;CL:0000048,1.84e-09,91;CL:0000553,4.21e-09,6;CL:0000556,4.21e-09,6;CL:0000839,6.39e-09,13;CL:0000034,1.21e-08,97;CL:0000557,3.38e-08,7;CL:0002476,4.89e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.64e-12!45;UBERON:0003061!2.64e-12!45;UBERON:0002193!9.44e-12!48;UBERON:0002371!1.66e-11!16;UBERON:0002405!2.05e-11!70;UBERON:0001474!1.25e-08!22;UBERON:0004765!1.25e-08!22;UBERON:0001434!1.25e-08!22;UBERON:0002384!5.05e-08!46;UBERON:0000926!3.93e-07!193;UBERON:0004120!3.93e-07!193;UBERON:0006603!3.93e-07!193;UBERON:0002530!9.37e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.76e-24,16;UBERON:0002384,1.02e-17,46;UBERON:0001474,8.83e-17,22;UBERON:0004765,8.83e-17,22;UBERON:0001434,8.83e-17,22;UBERON:0003126,6.51e-12,3;UBERON:0001005,6.51e-12,3;UBERON:0007196,6.51e-12,3;UBERON:0001558,6.51e-12,3;UBERON:0002204,6.73e-11,32;UBERON:0002390,3.61e-07,45;UBERON:0003061,3.61e-07,45 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0.34243593645101,0,0.856003649656029,0.0874204024189974,0.333109761815663,0.607425802169478,1.39912375625629,1.89277299214943,2.33094537129756,2.97072756258621,0,1.88652807281682,2.35079810225042,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0.418531630736908,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0.279972843250725,0,7.04686945442493,0,0.336093799142464,0.257259436035947,0,0,0,0.528990979272033,0,0.338844532069132,0,2.6996991518442,1.97773272513395,2.1314403448383,0.898800331555214,0,0,0,0,0,0.441737081903227,0,0,0,1.10115880999389,0,0,0,0,0,0.558365998002762,1.12552522006336,0.30559649555362,0.294628585473668,0.142371680799103,0,0.075726193333184,0,1.15945795480671,0,0,0.539703191637817,0,0,0,0,0,0,0.422530259330042,0,0,0,13.8554266247177,14.1881524666055,11.62706223534,0.11418387971906,0,0,0.867426633830679,0.304465478312141,0,1.50722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,1.31796636956512,0,1.01656181658452,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,2.1066395619397,0.257347907114715,3.12579849335152,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0.274561413188081,2.87536413054709,0,0.936113019343682,0.252578877947112,0,0.964887042726734,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.655453258862952,0.518054945597687,0.289298117163023,9.04747703635634,2.17562273527484,1.96705709207614,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.376736914009382,0,0.457556346413045,0.169978429993855,0.559805809294632,0.138199973804424,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0,0,0.259229946583586,3.10669656543463,0,0,0,0,0.387479470433193,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0.316011120628178,0.405450430580328,0.616265742988964,0.51968329191118,0,0,0.721172697119813,0.590758108698309,0.908698049533329,0.457240839929999,0.302478555410522,0.38983152295901,0.577271049841977,0.818138315270983,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:74789738..74789763,- | |||
}} |
Revision as of 10:53, 13 September 2013
Short description: | p@chr15:74789738..74789763, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:74789738..74789763, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.02e-17 | 46 |
mesenchymal cell | 1.02e-17 | 46 |
common myeloid progenitor | 6.91e-16 | 19 |
hematopoietic cell | 2.83e-15 | 32 |
hematopoietic oligopotent progenitor cell | 2.83e-15 | 32 |
hematopoietic stem cell | 2.83e-15 | 32 |
hematopoietic multipotent progenitor cell | 2.83e-15 | 32 |
motile cell | 1.36e-14 | 54 |
myeloid cell | 1.47e-12 | 16 |
duct epithelial cell | 6.51e-12 | 3 |
epithelial cell of tracheobronchial tree | 6.51e-12 | 3 |
branched duct epithelial cell | 6.51e-12 | 3 |
epithelial cell of lower respiratory tract | 6.51e-12 | 3 |
respiratory epithelial cell | 6.51e-12 | 3 |
tracheal epithelial cell | 6.51e-12 | 3 |
tracheoblast | 6.51e-12 | 3 |
bone marrow cell | 9.42e-11 | 3 |
mesenchymal stem cell of the bone marrow | 9.42e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 1.28e-09 | 25 |
somatic stem cell | 1.84e-09 | 91 |
multi fate stem cell | 1.84e-09 | 91 |
megakaryocyte progenitor cell | 4.21e-09 | 6 |
megakaryocyte | 4.21e-09 | 6 |
myeloid lineage restricted progenitor cell | 6.39e-09 | 13 |
stem cell | 1.21e-08 | 97 |
granulocyte monocyte progenitor cell | 3.38e-08 | 7 |
bone marrow macrophage | 4.89e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.76e-24 | 16 |
connective tissue | 1.02e-17 | 46 |
bone element | 8.83e-17 | 22 |
skeletal element | 8.83e-17 | 22 |
skeletal system | 8.83e-17 | 22 |
trachea | 6.51e-12 | 3 |
respiratory airway | 6.51e-12 | 3 |
tracheobronchial tree | 6.51e-12 | 3 |
lower respiratory tract | 6.51e-12 | 3 |
musculoskeletal system | 6.73e-11 | 32 |
hematopoietic system | 3.61e-07 | 45 |
blood island | 3.61e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.