FFCP PHASE1:Mm9::chr16:35001539..35001551,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=132|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:35001539..35001551,+|id=chr16:35001539..35001551,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.45e-09!59;UBERON:0001007!8.37e-09!128;UBERON:0001555!8.37e-09!128;UBERON:0007026!8.37e-09!128;UBERON:0005153!1.94e-08!17;UBERON:0004119!2.76e-08!130;UBERON:0000925!2.76e-08!130;UBERON:0006595!2.76e-08!130;UBERON:0004921!5.20e-08!126;UBERON:0004185!5.20e-08!126;UBERON:0000945!5.37e-07!16;UBERON:0010039!5.37e-07!16;UBERON:0000464!8.84e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.75e-16,47;UBERON:0001007,1.06e-09,116;UBERON:0001555,1.06e-09,116;UBERON:0007026,1.06e-09,116;UBERON:0004119,1.99e-09,118;UBERON:0000925,1.99e-09,118;UBERON:0006595,1.99e-09,118;UBERON:0004921,5.32e-09,114;UBERON:0000945,7.65e-09,16;UBERON:0010039,7.65e-09,16;UBERON:0000160,1.72e-08,31;UBERON:0003100,6.06e-07,11|phase1_expression=0.160148847104794,0,0.454999239389536,0.30246421130683,0,0,0.700837921786577,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,2.07990149631429,0.91763712426868,0,0,0.861884930743556,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.85960031981627,0,0,0,0,0,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0.448026887097336,0.280888840263504,0.170430322578058,0.779358013808606,0,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0.741584903203122,0.289198713839823,0,0.161766849947409,0,0,0,0.292780797011547,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0.407357455401265,0.373220911830279,1.0108910337347,0,0.130120442962704,0,0,0,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0.556094498451196,0,0,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0,0,0.991256348951394,1.32225283331772,0.853153002140936,0.696710015581316,0.644337306610467,1.4117846723634,0.667134131534611,2.09248188723815,2.37264530772256,2.14108641141214,3.2673577144035,1.59165177632921,2.53453313254856,1.79763881730844,1.94524244887225,1.59313018603494,0.189667900953082,0,0,0.610953983535943,0.775809948670503,0.280543279561274,0.316182685621286,0.295220295959204,0.31399745568275,0.370191491765402,0,0,0.196558995113203,0,0.405720242777006,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0,0.482443521363367,0.739012760666419,0.189491411770485,0.814824882210129,0.339490171550376,0.469380496577004,0.502518772325447,0.476087281772027,0.585400943573396,0.630540576424764,1.32878813789265,0.956728611944923,0.983179888294428,0.690739927463582,1.15719246865209,0,0,1.47529281905711,1.10374698521893,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.178065603667255,0,2.96946221350564,1.32745138339963,0,0.302323556964751,0,0,0,0,0,0,1.8962205476149,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,1.10264199027481,0,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,2.62332752966866,0.18542530201051,0.341741761595705,0.619160603889667,0.185194527369712,0.376736914009382,0.27338845544205,0,0,0.139951452323658,0,10.5013767981662,0.158167996790568,0.406638934253697,1.72808545314882,2.92723614420256,2.62035076495413,3.9110660451598,2.39695021603474,1.83229159388821,2.46268449254406,1.86401793926078,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.704143431874524,0.651021924219751,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,7.92077335531981,6.38120416534019,1.64836461840539,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0.44449345560323,0.618105171716683,0,0.505394423527595,0.25347929989024,0,0,0.384150914429216,0.17230640686684,0,0.231768651889711,0,0.824171801606613,0,0,1.06485483695602,0.476872379894642,0.726732083161643,0.470546902076653,0.338458431566706,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0.441182838239031,0|short_description=p@chr16:35001539..35001551,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=132 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:35001539..35001551,+ | |||
|id=chr16:35001539..35001551,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.45e-09!59;UBERON:0001007!8.37e-09!128;UBERON:0001555!8.37e-09!128;UBERON:0007026!8.37e-09!128;UBERON:0005153!1.94e-08!17;UBERON:0004119!2.76e-08!130;UBERON:0000925!2.76e-08!130;UBERON:0006595!2.76e-08!130;UBERON:0004921!5.20e-08!126;UBERON:0004185!5.20e-08!126;UBERON:0000945!5.37e-07!16;UBERON:0010039!5.37e-07!16;UBERON:0000464!8.84e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.75e-16,47;UBERON:0001007,1.06e-09,116;UBERON:0001555,1.06e-09,116;UBERON:0007026,1.06e-09,116;UBERON:0004119,1.99e-09,118;UBERON:0000925,1.99e-09,118;UBERON:0006595,1.99e-09,118;UBERON:0004921,5.32e-09,114;UBERON:0000945,7.65e-09,16;UBERON:0010039,7.65e-09,16;UBERON:0000160,1.72e-08,31;UBERON:0003100,6.06e-07,11 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0.30246421130683,0,0,0.700837921786577,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,2.07990149631429,0.91763712426868,0,0,0.861884930743556,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.85960031981627,0,0,0,0,0,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0.448026887097336,0.280888840263504,0.170430322578058,0.779358013808606,0,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0.741584903203122,0.289198713839823,0,0.161766849947409,0,0,0,0.292780797011547,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0.407357455401265,0.373220911830279,1.0108910337347,0,0.130120442962704,0,0,0,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0.556094498451196,0,0,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0,0,0.991256348951394,1.32225283331772,0.853153002140936,0.696710015581316,0.644337306610467,1.4117846723634,0.667134131534611,2.09248188723815,2.37264530772256,2.14108641141214,3.2673577144035,1.59165177632921,2.53453313254856,1.79763881730844,1.94524244887225,1.59313018603494,0.189667900953082,0,0,0.610953983535943,0.775809948670503,0.280543279561274,0.316182685621286,0.295220295959204,0.31399745568275,0.370191491765402,0,0,0.196558995113203,0,0.405720242777006,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0,0.482443521363367,0.739012760666419,0.189491411770485,0.814824882210129,0.339490171550376,0.469380496577004,0.502518772325447,0.476087281772027,0.585400943573396,0.630540576424764,1.32878813789265,0.956728611944923,0.983179888294428,0.690739927463582,1.15719246865209,0,0,1.47529281905711,1.10374698521893,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.178065603667255,0,2.96946221350564,1.32745138339963,0,0.302323556964751,0,0,0,0,0,0,1.8962205476149,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,1.10264199027481,0,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,2.62332752966866,0.18542530201051,0.341741761595705,0.619160603889667,0.185194527369712,0.376736914009382,0.27338845544205,0,0,0.139951452323658,0,10.5013767981662,0.158167996790568,0.406638934253697,1.72808545314882,2.92723614420256,2.62035076495413,3.9110660451598,2.39695021603474,1.83229159388821,2.46268449254406,1.86401793926078,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.704143431874524,0.651021924219751,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,7.92077335531981,6.38120416534019,1.64836461840539,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0.44449345560323,0.618105171716683,0,0.505394423527595,0.25347929989024,0,0,0.384150914429216,0.17230640686684,0,0.231768651889711,0,0.824171801606613,0,0,1.06485483695602,0.476872379894642,0.726732083161643,0.470546902076653,0.338458431566706,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0.441182838239031,0 | |||
|short_description=p@chr16:35001539..35001551,+ | |||
}} |
Revision as of 12:32, 13 September 2013
Short description: | p@chr16:35001539..35001551, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:35001539..35001551, + |
Coexpression cluster: | MCL_coexpression_mm9:132 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.75e-16 | 47 |
digestive system | 1.06e-09 | 116 |
digestive tract | 1.06e-09 | 116 |
primitive gut | 1.06e-09 | 116 |
endoderm-derived structure | 1.99e-09 | 118 |
endoderm | 1.99e-09 | 118 |
presumptive endoderm | 1.99e-09 | 118 |
subdivision of digestive tract | 5.32e-09 | 114 |
stomach | 7.65e-09 | 16 |
food storage organ | 7.65e-09 | 16 |
intestine | 1.72e-08 | 31 |
female organism | 6.06e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.