FFCP PHASE1:Hg19::chr5:147258266..147258280,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=117156|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18391|TSSclassifier=N|UniProt=Q96PL1,Q2L6B3|association_with_transcript=0bp_to_ENST00000296694,NM_054023,uc003lot.1_5end|coexpression_cluster_id=C131|description=CAGE_peak_1_at_SCGB3A2_5end|id=chr5:147258266..147258280,+|ontology_enrichment_celltype=CL:0000153!2.95e-09!9;CL:0000447!2.95e-09!9;CL:0000667!3.68e-09!6;CL:0000058!3.68e-09!6;CL:0000138!3.68e-09!6|ontology_enrichment_celltype_v019=CL:0000153;2.21e-10;9!CL:0000447;2.21e-10;9!CL:0000138;4.39e-09;6|ontology_enrichment_celltype_v019_2=CL:0000153,2.32e-10,9;CL:0000447,2.32e-10,9;CL:0000058,4.64e-09,6;CL:0000138,4.64e-09,6|ontology_enrichment_development_v019=UBERON:0000358;1.86e-07;1!UBERON:0005754;9.18e-07;1|ontology_enrichment_disease=DOID:114!6.07e-08!2|ontology_enrichment_disease_v019=DOID:114;1.92e-12;2!DOID:178;3.40e-07;1!DOID:326;3.40e-07;1!DOID:3978;3.40e-07;1!DOID:3394;3.40e-07;1!DOID:5844;3.40e-07;1!DOID:6193;9.18e-07;1|ontology_enrichment_disease_v019_2=DOID:114,2.04e-12,2;DOID:178,3.40e-07,1;DOID:326,3.40e-07,1;DOID:3978,3.40e-07,1;DOID:3394,3.40e-07,1;DOID:5844,3.40e-07,1;DOID:6193,8.67e-07,1|ontology_enrichment_uberon=UBERON:0007023!1.91e-10!115;UBERON:0003127!1.73e-08!2;UBERON:0000341!2.38e-08!2;UBERON:0000007!7.70e-08!2;UBERON:0001829!2.23e-07!2|ontology_enrichment_uberon_v019=UBERON:0003127;2.43e-13;2!UBERON:0000341;4.17e-13;2!UBERON:0000007;3.62e-12;2!UBERON:0002171;1.65e-07;1!UBERON:0006518;1.65e-07;1!UBERON:0008949;1.65e-07;1!UBERON:0000101;1.65e-07;1!UBERON:0002167;1.65e-07;1!UBERON:0007029;2.37e-07;1!UBERON:0005795;3.94e-07;1!UBERON:0002426;6.49e-07;1!UBERON:0003831;6.49e-07;1!UBERON:0003898;6.49e-07;1!UBERON:0004830;6.49e-07;1!UBERON:0003830;6.49e-07;1!UBERON:0005175;6.49e-07;1!UBERON:0001774;6.49e-07;1!UBERON:0001103;6.49e-07;1!UBERON:0000998;9.18e-07;1!UBERON:0006868;9.18e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.43e-13,2;UBERON:0000341,4.17e-13,2;UBERON:0000007,3.05e-12,2;UBERON:0002171,1.65e-07,1;UBERON:0006518,1.65e-07,1;UBERON:0008949,1.65e-07,1;UBERON:0000101,1.65e-07,1;UBERON:0002167,1.65e-07,1;UBERON:0007029,2.37e-07,1;UBERON:0002426,6.49e-07,1;UBERON:0003831,6.49e-07,1;UBERON:0003898,6.49e-07,1;UBERON:0004830,6.49e-07,1;UBERON:0003830,6.49e-07,1;UBERON:0005175,6.49e-07,1;UBERON:0001774,6.49e-07,1;UBERON:0001103,6.49e-07,1;UBERON:0010084,6.49e-07,1;UBERON:0000998,8.18e-07,1;UBERON:0006868,8.18e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,2.00535164254356,4.49024208778554,0,4.86634870302636,0,0,0.087834785693126,83.9575873940338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,165.792987741185,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,1.00187420719394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0.30982349809975,0,0,0,0,0,35.6771903653052,0,0,0,0,0,0,166.728671175676,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,152.623959000319,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.5476770813356,2.14613024068285,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,440.177714604037,6576.01328662413,1515.28646446004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89915827943143,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0.126831620387814,0,0.548257766857182,0,0,0,0,0,2.42786241694653,2.73194629621557,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,7.744092458765,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,187.970154313887,0,0,0,0,0,0,0,3.27839340755936,0,0,0,0,0,9.7210817344182,0,0,0.0644578879735772,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,379.130019819944,254.014748371811,0,0.0620747142958579,0,0.12729431655633,3.23387502333151,0.653150243690884,1.71116650542641,0.606168477131288,475.374777342659,4066.44019841847,0,0,0,0,441.124971718494,0.122241444182866,7.32413120968329,0,0,0|short_description=p1@SCGB3A2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=117156 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18391 | |||
|TSSclassifier=N | |||
|UniProt=Q96PL1,Q2L6B3 | |||
|association_with_transcript=0bp_to_ENST00000296694,NM_054023,uc003lot.1_5end | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_1_at_SCGB3A2_5end | |||
|id=chr5:147258266..147258280,+ | |||
|ontology_enrichment_celltype=CL:0000153!2.95e-09!9;CL:0000447!2.95e-09!9;CL:0000667!3.68e-09!6;CL:0000058!3.68e-09!6;CL:0000138!3.68e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.21e-10;9!CL:0000447;2.21e-10;9!CL:0000138;4.39e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.32e-10,9;CL:0000447,2.32e-10,9;CL:0000058,4.64e-09,6;CL:0000138,4.64e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.86e-07;1!UBERON:0005754;9.18e-07;1 | |||
|ontology_enrichment_disease=DOID:114!6.07e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.92e-12;2!DOID:178;3.40e-07;1!DOID:326;3.40e-07;1!DOID:3978;3.40e-07;1!DOID:3394;3.40e-07;1!DOID:5844;3.40e-07;1!DOID:6193;9.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.04e-12,2;DOID:178,3.40e-07,1;DOID:326,3.40e-07,1;DOID:3978,3.40e-07,1;DOID:3394,3.40e-07,1;DOID:5844,3.40e-07,1;DOID:6193,8.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-10!115;UBERON:0003127!1.73e-08!2;UBERON:0000341!2.38e-08!2;UBERON:0000007!7.70e-08!2;UBERON:0001829!2.23e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.43e-13;2!UBERON:0000341;4.17e-13;2!UBERON:0000007;3.62e-12;2!UBERON:0002171;1.65e-07;1!UBERON:0006518;1.65e-07;1!UBERON:0008949;1.65e-07;1!UBERON:0000101;1.65e-07;1!UBERON:0002167;1.65e-07;1!UBERON:0007029;2.37e-07;1!UBERON:0005795;3.94e-07;1!UBERON:0002426;6.49e-07;1!UBERON:0003831;6.49e-07;1!UBERON:0003898;6.49e-07;1!UBERON:0004830;6.49e-07;1!UBERON:0003830;6.49e-07;1!UBERON:0005175;6.49e-07;1!UBERON:0001774;6.49e-07;1!UBERON:0001103;6.49e-07;1!UBERON:0000998;9.18e-07;1!UBERON:0006868;9.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.43e-13,2;UBERON:0000341,4.17e-13,2;UBERON:0000007,3.05e-12,2;UBERON:0002171,1.65e-07,1;UBERON:0006518,1.65e-07,1;UBERON:0008949,1.65e-07,1;UBERON:0000101,1.65e-07,1;UBERON:0002167,1.65e-07,1;UBERON:0007029,2.37e-07,1;UBERON:0002426,6.49e-07,1;UBERON:0003831,6.49e-07,1;UBERON:0003898,6.49e-07,1;UBERON:0004830,6.49e-07,1;UBERON:0003830,6.49e-07,1;UBERON:0005175,6.49e-07,1;UBERON:0001774,6.49e-07,1;UBERON:0001103,6.49e-07,1;UBERON:0010084,6.49e-07,1;UBERON:0000998,8.18e-07,1;UBERON:0006868,8.18e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,2.00535164254356,4.49024208778554,0,4.86634870302636,0,0,0.087834785693126,83.9575873940338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,165.792987741185,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,1.00187420719394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0.30982349809975,0,0,0,0,0,35.6771903653052,0,0,0,0,0,0,166.728671175676,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,152.623959000319,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.5476770813356,2.14613024068285,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,440.177714604037,6576.01328662413,1515.28646446004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89915827943143,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0.126831620387814,0,0.548257766857182,0,0,0,0,0,2.42786241694653,2.73194629621557,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,7.744092458765,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,187.970154313887,0,0,0,0,0,0,0,3.27839340755936,0,0,0,0,0,9.7210817344182,0,0,0.0644578879735772,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,379.130019819944,254.014748371811,0,0.0620747142958579,0,0.12729431655633,3.23387502333151,0.653150243690884,1.71116650542641,0.606168477131288,475.374777342659,4066.44019841847,0,0,0,0,441.124971718494,0.122241444182866,7.32413120968329,0,0,0 | |||
|short_description=p1@SCGB3A2 | |||
}} |
Revision as of 13:54, 13 September 2013
Short description: | p1@SCGB3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SCGB3A2_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 0bp_to_ENST00000296694, NM_054023, uc003lot.1_5end |
EntrezGene: | SCGB3A2 |
HGNC: | 18391 |
UniProt: | Q96PL1Q2L6B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.32e-10 | 9 |
carbohydrate secreting cell | 2.32e-10 | 9 |
chondroblast | 4.64e-09 | 6 |
chondrocyte | 4.64e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.43e-13 | 2 |
throat | 4.17e-13 | 2 |
pituitary gland | 3.05e-12 | 2 |
lower lobe of right lung | 1.65e-07 | 1 |
right lung lobe | 1.65e-07 | 1 |
lower lobe of lung | 1.65e-07 | 1 |
lobe of lung | 1.65e-07 | 1 |
right lung | 1.65e-07 | 1 |
surface | 2.37e-07 | 1 |
chest muscle | 6.49e-07 | 1 |
respiratory system muscle | 6.49e-07 | 1 |
skeletal muscle of trunk | 6.49e-07 | 1 |
respiratory system skeletal muscle | 6.49e-07 | 1 |
thoracic segment muscle | 6.49e-07 | 1 |
chest organ | 6.49e-07 | 1 |
muscle of trunk | 6.49e-07 | 1 |
diaphragm | 6.49e-07 | 1 |
future diaphragm | 6.49e-07 | 1 |
seminal vesicle | 8.18e-07 | 1 |
seminal fluid secreting gland | 8.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.04e-12 | 2 |
vascular disease | 3.40e-07 | 1 |
ischemia | 3.40e-07 | 1 |
extrinsic cardiomyopathy | 3.40e-07 | 1 |
myocardial ischemia | 3.40e-07 | 1 |
myocardial infarction | 3.40e-07 | 1 |
epithelioid sarcoma | 8.67e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.