FFCP PHASE1:Hg19::chr5:148805063..148805088,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C781|description=CAGE_peak_at_chr5:148805063..148805088,+|id=chr5:148805063..148805088,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0009143;2.18e-34;1!UBERON:0006242;5.97e-34;1!UBERON:0004874;5.97e-34;1!UBERON:0009847;2.74e-12;3!UBERON:0003353;2.74e-12;3!UBERON:0006603;1.40e-07;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.21e-27!115;UBERON:0002360!1.09e-08!2;UBERON:0000094!1.09e-08!2;UBERON:0007645!1.09e-08!2|ontology_enrichment_uberon_v019=UBERON:0000989;5.97e-34;1!UBERON:0007195;5.97e-34;1!UBERON:0008811;5.97e-34;1!UBERON:0001255;5.96e-18;2!UBERON:0001556;5.96e-18;2!UBERON:0001043;1.96e-12;3!UBERON:0002110;2.74e-12;3!UBERON:0002075;2.33e-08;18!UBERON:0003101;5.74e-07;22!UBERON:0000079;5.74e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000989,3.61e-34,1;UBERON:0008811,3.61e-34,1;UBERON:0006258,3.61e-34,1;UBERON:0005876,3.61e-34,1;UBERON:0004874,3.61e-34,1;UBERON:0007195,9.85e-34,1;UBERON:0001255,6.48e-18,2;UBERON:0001556,6.48e-18,2;UBERON:0001043,1.85e-12,3;UBERON:0009143,1.85e-12,3;UBERON:0002110,2.89e-12,3;UBERON:0006242,2.89e-12,3;UBERON:0003064,2.13e-11,28;UBERON:0000162,1.81e-10,14;UBERON:0001353,1.81e-10,14;UBERON:0000163,1.81e-10,14;UBERON:0006866,1.81e-10,14;UBERON:0000164,1.81e-10,14;UBERON:0000931,1.81e-10,14;UBERON:0004122,7.75e-10,15;UBERON:0002075,2.42e-08,18;UBERON:0001046,5.73e-08,19;UBERON:0007023,1.08e-07,114;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.552567831062295,0,0,0,0,0,0,0,4.53759665929895,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,4.75246180793255,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,1.41287567130925,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0,0,0,0.202117188958219,0.435433495793923,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr5:148805063..148805088,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C781 | |||
|description=CAGE_peak_at_chr5:148805063..148805088,+ | |||
|id=chr5:148805063..148805088,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.18e-34;1!UBERON:0006242;5.97e-34;1!UBERON:0004874;5.97e-34;1!UBERON:0009847;2.74e-12;3!UBERON:0003353;2.74e-12;3!UBERON:0006603;1.40e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.21e-27!115;UBERON:0002360!1.09e-08!2;UBERON:0000094!1.09e-08!2;UBERON:0007645!1.09e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;5.97e-34;1!UBERON:0007195;5.97e-34;1!UBERON:0008811;5.97e-34;1!UBERON:0001255;5.96e-18;2!UBERON:0001556;5.96e-18;2!UBERON:0001043;1.96e-12;3!UBERON:0002110;2.74e-12;3!UBERON:0002075;2.33e-08;18!UBERON:0003101;5.74e-07;22!UBERON:0000079;5.74e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,3.61e-34,1;UBERON:0008811,3.61e-34,1;UBERON:0006258,3.61e-34,1;UBERON:0005876,3.61e-34,1;UBERON:0004874,3.61e-34,1;UBERON:0007195,9.85e-34,1;UBERON:0001255,6.48e-18,2;UBERON:0001556,6.48e-18,2;UBERON:0001043,1.85e-12,3;UBERON:0009143,1.85e-12,3;UBERON:0002110,2.89e-12,3;UBERON:0006242,2.89e-12,3;UBERON:0003064,2.13e-11,28;UBERON:0000162,1.81e-10,14;UBERON:0001353,1.81e-10,14;UBERON:0000163,1.81e-10,14;UBERON:0006866,1.81e-10,14;UBERON:0000164,1.81e-10,14;UBERON:0000931,1.81e-10,14;UBERON:0004122,7.75e-10,15;UBERON:0002075,2.42e-08,18;UBERON:0001046,5.73e-08,19;UBERON:0007023,1.08e-07,114;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22 | |||
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|short_description=p@chr5:148805063..148805088,+ | |||
}} |
Revision as of 13:59, 13 September 2013
Short description: | p@chr5:148805063..148805088, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:148805063..148805088, + |
Coexpression cluster: | C781_bladder_esophagus_penis_prostate_skeletal_left_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
penis | 3.61e-34 | 1 |
intromittent organ | 3.61e-34 | 1 |
lateral plate mesenchyme | 3.61e-34 | 1 |
undifferentiated genital tubercle | 3.61e-34 | 1 |
somatopleure | 3.61e-34 | 1 |
stroma of bone marrow | 9.85e-34 | 1 |
urinary bladder | 6.48e-18 | 2 |
lower urinary tract | 6.48e-18 | 2 |
esophagus | 1.85e-12 | 3 |
esophageal region | 1.85e-12 | 3 |
gallbladder | 2.89e-12 | 3 |
gall bladder primordium | 2.89e-12 | 3 |
intermediate mesoderm | 2.13e-11 | 28 |
cloaca | 1.81e-10 | 14 |
anal region | 1.81e-10 | 14 |
embryonic cloaca | 1.81e-10 | 14 |
terminal part of digestive tract | 1.81e-10 | 14 |
primitive urogenital sinus | 1.81e-10 | 14 |
proctodeum | 1.81e-10 | 14 |
genitourinary system | 7.75e-10 | 15 |
viscus | 2.42e-08 | 18 |
hindgut | 5.73e-08 | 19 |
adult organism | 1.08e-07 | 114 |
male organism | 5.40e-07 | 22 |
male reproductive system | 5.40e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.