FFCP PHASE1:Mm9::chr17:35164579..35164592,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=78376|HGNC=|MCL_coexpression_id=1157|UniProt=|association_with_transcript=11bp_to_ENSMUST00000173211_5end|description=CAGE_peak_4_at_Ng23_5end|id=chr17:35164579..35164592,-|ontology_enrichment_celltype=CL:0000553!7.18e-15!6;CL:0000556!7.18e-15!6;CL:0000050!1.26e-09!9;CL:0002031!5.59e-08!25;CL:0002027!6.26e-08!3;CL:0002006!6.26e-08!3;CL:0002024!6.26e-08!3;CL:0000414!1.02e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,1.83e-19,6;CL:0000556,1.83e-19,6;CL:0000815,3.62e-14,1;CL:0000792,3.62e-14,1;CL:0000050,3.07e-13,9;CL:0000839,2.21e-09,13;CL:0002031,1.49e-08,25;CL:0000763,9.61e-08,16;CL:0000988,9.13e-07,32;CL:0002032,9.13e-07,32;CL:0000037,9.13e-07,32;CL:0000837,9.13e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!9.73e-09!9;UBERON:0000019!9.73e-09!9;UBERON:0000047!9.73e-09!9;UBERON:0004088!9.73e-09!9;UBERON:0002104!9.73e-09!9;UBERON:0001456!9.73e-09!9;UBERON:0003072!9.73e-09!9;UBERON:0003071!9.73e-09!9;UBERON:0004128!9.73e-09!9;UBERON:0000020!2.01e-08!12;UBERON:0001032!2.01e-08!12;UBERON:0004456!2.01e-08!12;UBERON:0005085!1.08e-07!13;UBERON:0001444!5.18e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.02e-25,2;UBERON:0001961,1.02e-25,2;UBERON:0001744,1.02e-25,2;UBERON:0002465,1.59e-17,3;UBERON:0003199,8.69e-14,1;UBERON:0002371,9.61e-08,16;UBERON:0002193,8.45e-07,48;UBERON:0002405,8.45e-07,48|phase1_expression=0.160148847104794,0,0,0,0,0,0,11.2337291394171,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0.699561878128147,4.25873923233621,2.4680598049033,4.66828616977833,0,0.0992909512008853,0.783599367416806,2.71987118748791,3.89995777814189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.780722657776222,0.229902104433473,0.180062129805349,0.452114453507145,0.204109497453984,0,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p4@Ng23}} | ||
|EntrezGene=78376 | |||
|HGNC= | |||
|MCL_coexpression_id=1157 | |||
|UniProt= | |||
|association_with_transcript=11bp_to_ENSMUST00000173211_5end | |||
|description=CAGE_peak_4_at_Ng23_5end | |||
|id=chr17:35164579..35164592,- | |||
|ontology_enrichment_celltype=CL:0000553!7.18e-15!6;CL:0000556!7.18e-15!6;CL:0000050!1.26e-09!9;CL:0002031!5.59e-08!25;CL:0002027!6.26e-08!3;CL:0002006!6.26e-08!3;CL:0002024!6.26e-08!3;CL:0000414!1.02e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.83e-19,6;CL:0000556,1.83e-19,6;CL:0000815,3.62e-14,1;CL:0000792,3.62e-14,1;CL:0000050,3.07e-13,9;CL:0000839,2.21e-09,13;CL:0002031,1.49e-08,25;CL:0000763,9.61e-08,16;CL:0000988,9.13e-07,32;CL:0002032,9.13e-07,32;CL:0000037,9.13e-07,32;CL:0000837,9.13e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!9.73e-09!9;UBERON:0000019!9.73e-09!9;UBERON:0000047!9.73e-09!9;UBERON:0004088!9.73e-09!9;UBERON:0002104!9.73e-09!9;UBERON:0001456!9.73e-09!9;UBERON:0003072!9.73e-09!9;UBERON:0003071!9.73e-09!9;UBERON:0004128!9.73e-09!9;UBERON:0000020!2.01e-08!12;UBERON:0001032!2.01e-08!12;UBERON:0004456!2.01e-08!12;UBERON:0005085!1.08e-07!13;UBERON:0001444!5.18e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.02e-25,2;UBERON:0001961,1.02e-25,2;UBERON:0001744,1.02e-25,2;UBERON:0002465,1.59e-17,3;UBERON:0003199,8.69e-14,1;UBERON:0002371,9.61e-08,16;UBERON:0002193,8.45e-07,48;UBERON:0002405,8.45e-07,48 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,11.2337291394171,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0.699561878128147,4.25873923233621,2.4680598049033,4.66828616977833,0,0.0992909512008853,0.783599367416806,2.71987118748791,3.89995777814189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.780722657776222,0.229902104433473,0.180062129805349,0.452114453507145,0.204109497453984,0,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Ng23 | |||
}} |
Revision as of 14:19, 13 September 2013
Short description: | p4@Ng23 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ng23_5end |
Coexpression cluster: | MCL_coexpression_mm9:1157 |
Association with transcript: | 11bp_to_ENSMUST00000173211_5end |
EntrezGene: | Ng23 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.83e-19 | 6 |
megakaryocyte | 1.83e-19 | 6 |
regulatory T cell | 3.62e-14 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.62e-14 | 1 |
megakaryocyte-erythroid progenitor cell | 3.07e-13 | 9 |
myeloid lineage restricted progenitor cell | 2.21e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 1.49e-08 | 25 |
myeloid cell | 9.61e-08 | 16 |
hematopoietic cell | 9.13e-07 | 32 |
hematopoietic oligopotent progenitor cell | 9.13e-07 | 32 |
hematopoietic stem cell | 9.13e-07 | 32 |
hematopoietic multipotent progenitor cell | 9.13e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 1.02e-25 | 2 |
mucosa-associated lymphoid tissue | 1.02e-25 | 2 |
lymphoid tissue | 1.02e-25 | 2 |
lymphoid system | 1.59e-17 | 3 |
egg chamber | 8.69e-14 | 1 |
bone marrow | 9.61e-08 | 16 |
hemolymphoid system | 8.45e-07 | 48 |
immune system | 8.45e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.