FFCP PHASE1:Hg19::chr5:173907020..173907027,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1953|description=CAGE_peak_at_chr5:173907020..173907027,+|id=chr5:173907020..173907027,+|ontology_enrichment_celltype=CL:0000066!8.16e-13!254;CL:0000223!1.71e-08!59;CL:0002076!1.74e-07!43|ontology_enrichment_celltype_v019=CL:0002231;1.19e-07;3!CL:0002178;1.19e-07;3|ontology_enrichment_celltype_v019_2=CL:0002178,9.40e-08,3;CL:0002231,2.11e-07,3|ontology_enrichment_development_v019=UBERON:0003104;2.85e-09;31!UBERON:0006242;6.40e-07;1|ontology_enrichment_disease=DOID:305!1.03e-14!106;DOID:0050687!3.95e-10!143|ontology_enrichment_disease_v019=DOID:3493;1.31e-11;2!DOID:299;6.15e-07;25|ontology_enrichment_disease_v019_2=DOID:3493,1.35e-11,2;DOID:299,4.83e-07,25|ontology_enrichment_uberon=UBERON:0004921!3.10e-11!129;UBERON:0004185!3.10e-11!129;UBERON:0001007!7.50e-11!155;UBERON:0001555!7.50e-11!155;UBERON:0007026!7.50e-11!155;UBERON:0004119!2.29e-10!169;UBERON:0000925!2.29e-10!169;UBERON:0006595!2.29e-10!169;UBERON:0000077!1.23e-09!130;UBERON:0001041!1.21e-08!98;UBERON:0001048!8.43e-08!168;UBERON:0000481!1.42e-07!347;UBERON:0001004!3.84e-07!72|ontology_enrichment_uberon_v019=UBERON:0005409;1.84e-13;22!UBERON:0004921;2.44e-12;33!UBERON:0005090;4.71e-11;2!UBERON:0001630;4.71e-11;2!UBERON:0000945;5.43e-10;5!UBERON:0010039;5.43e-10;5!UBERON:0001155;1.68e-09;9!UBERON:0001041;3.18e-09;14!UBERON:0000059;8.72e-08;11!UBERON:0000160;3.66e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.11e-12,25;UBERON:0005090,2.41e-11,2;UBERON:0001630,2.41e-11,2;UBERON:0001155,1.35e-09,9;UBERON:0000059,7.30e-08,11;UBERON:0000160,3.20e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0.919421224478927,0,0.369754010166788,0.46480320348181,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0.575384784644301,0,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.472674085820339,0,0,1.57174890597255,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.365921118388786,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0.441175890929576,0.871517776369625,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.614942192715568,0,0.658501712451753,0,0.502644862058154,0.0925884451585296,0.325808305310325,0,0,0.463721619900307,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.425325291727159,0.358234090811393,0.871901815541886,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.899756920638513,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,1.20859449591622,0,1.01289087829486,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.447749509444357,0.219259876645935,0.522870902049801,0.512900250232778,0.656029291399411,0,0.721287081534056,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.30347334256665,0,0,0.6970372701606,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0.470719003883896,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61421621224659,0.146508179271894,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,1.65770349318689,1.76352923497993,0.102268682502155,0,0,0.898683511473268,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0,0.472775363535873,0,0,0,0,0.241192877250816,1.52581736317083,0,0,0.438770794307945,0.21787692703798,4.46155981691531,0,0,0,0.538545866458633,1.84700532267414,0,0,0,1.02193298195737,0,0,0.451191321234361,0,0.335643173951685,0.189753732724185,0,0,0.326465616318295,1.69623685720729,0,3.98104772431402,4.68825091867698,0,0.889563386041866,0.247127877893006,0.104421949505455,0,1.60515529459758,0.234264445725339,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0.30607276163049,0.063186579628488,1.05226393590145,0.103688191397247,0,0,0,0,0.569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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1953 | |||
|description=CAGE_peak_at_chr5:173907020..173907027,+ | |||
|id=chr5:173907020..173907027,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.16e-13!254;CL:0000223!1.71e-08!59;CL:0002076!1.74e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002231;1.19e-07;3!CL:0002178;1.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,9.40e-08,3;CL:0002231,2.11e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.85e-09;31!UBERON:0006242;6.40e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.03e-14!106;DOID:0050687!3.95e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.31e-11;2!DOID:299;6.15e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.35e-11,2;DOID:299,4.83e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.10e-11!129;UBERON:0004185!3.10e-11!129;UBERON:0001007!7.50e-11!155;UBERON:0001555!7.50e-11!155;UBERON:0007026!7.50e-11!155;UBERON:0004119!2.29e-10!169;UBERON:0000925!2.29e-10!169;UBERON:0006595!2.29e-10!169;UBERON:0000077!1.23e-09!130;UBERON:0001041!1.21e-08!98;UBERON:0001048!8.43e-08!168;UBERON:0000481!1.42e-07!347;UBERON:0001004!3.84e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.84e-13;22!UBERON:0004921;2.44e-12;33!UBERON:0005090;4.71e-11;2!UBERON:0001630;4.71e-11;2!UBERON:0000945;5.43e-10;5!UBERON:0010039;5.43e-10;5!UBERON:0001155;1.68e-09;9!UBERON:0001041;3.18e-09;14!UBERON:0000059;8.72e-08;11!UBERON:0000160;3.66e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.11e-12,25;UBERON:0005090,2.41e-11,2;UBERON:0001630,2.41e-11,2;UBERON:0001155,1.35e-09,9;UBERON:0000059,7.30e-08,11;UBERON:0000160,3.20e-07,17 | |||
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| |||
|short_description=p@chr5:173907020..173907027,+ | |||
}} |
Revision as of 14:58, 13 September 2013
Short description: | p@chr5:173907020..173907027, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:173907020..173907027, + |
Coexpression cluster: | C1953_stomach_signet_gall_small_giant_adenocarcinoma_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 9.40e-08 | 3 |
epithelial cell of prostate | 2.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.11e-12 | 25 |
muscle structure | 2.41e-11 | 2 |
muscle organ | 2.41e-11 | 2 |
colon | 1.35e-09 | 9 |
large intestine | 7.30e-08 | 11 |
intestine | 3.20e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.35e-11 | 2 |
adenocarcinoma | 4.83e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.